[R/beastscriptr.R:1:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L1) *style:* **Commented code should be removed.**
```r
# source("~/GitHubs/R/Phylogenies/convert_fasta_file_to_sequences.R")
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:2:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L2) *style:* **Commented code should be removed.**
```r
# source("~/GitHubs/R/FileIo/remove_file_extension.R")
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:48:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L48) *style:* **lines should not be more than 80 characters.**
```r
  text <- c(text,"<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"no\"?><beast beautitemplate='Standard' beautistatus='' namespace=\"beast.core:beast.evolution.alignment:beast.evolution.tree.coalescent:beast.core.util:beast.evolution.nuc:beast.evolution.operators:beast.evolution.sitemodel:beast.evolution.substitutionmodel:beast.evolution.likelihood\" version=\"2.0\">")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:48:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L48) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"no\"?><beast beautitemplate='Standard' beautistatus='' namespace=\"beast.core:beast.evolution.alignment:beast.evolution.tree.coalescent:beast.core.util:beast.evolution.nuc:beast.evolution.operators:beast.evolution.sitemodel:beast.evolution.substitutionmodel:beast.evolution.likelihood\" version=\"2.0\">")
                 ^
```
[R/beastscriptr.R:49:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L49) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:50:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L50) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:53:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L53) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"    <data")
                 ^
```
[R/beastscriptr.R:54:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L54) *style:* **Commas should always have a space after.**
```r
  text <- c(text,paste("id=\"", filename_base, "\"", sep = ""))
                 ^
```
[R/beastscriptr.R:55:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L55) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"name=\"alignment\">")
                 ^
```
[R/beastscriptr.R:57:48:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L57) *style:* **Commas should always have a space after.**
```r
  sequences <- cbind(rownames(sequences_table),sequences_table)
                                               ^
```
[R/beastscriptr.R:59:32:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L59) *style:* **Commas should always have a space after.**
```r
  no_output <- apply(sequences,1,function(row) {
                               ^
```
[R/beastscriptr.R:59:34:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L59) *style:* **Commas should always have a space after.**
```r
  no_output <- apply(sequences,1,function(row) {
                                 ^
```
[R/beastscriptr.R:67:12:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L67) *warning:* **Do not use absolute paths.**
```r
        "\"/>",
           ^~
```
[R/beastscriptr.R:70:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L70) *style:* **Commas should always have a space after.**
```r
      text <<- c(text,nextline)
                      ^
```
[R/beastscriptr.R:101:22:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L101) *style:* **Commas should always have a space after.**
```r
    mcmc_chainlength,"\">", sep = ""))
                     ^
```
[R/beastscriptr.R:108:8:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L108) *warning:* **Do not use absolute paths.**
```r
    "\"/>", sep = ""))
       ^~
```
[R/beastscriptr.R:118:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L118) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" lower=\"0.0\" name=\"stateNode\"",
                    ^
```
[R/beastscriptr.R:123:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L123) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" name=\"stateNode\">0.3</parameter>", sep = ""))
                    ^
```
[R/beastscriptr.R:129:57:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L129) *style:* **Commas should always have a space after.**
```r
    " initial=\"@Tree.t:", filename_base, "\" taxa=\"@",filename_base,"\">",
                                                        ^
```
[R/beastscriptr.R:129:71:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L129) *style:* **Commas should always have a space after.**
```r
    " initial=\"@Tree.t:", filename_base, "\" taxa=\"@",filename_base,"\">",
                                                                      ^
```
[R/beastscriptr.R:143:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L143) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:148:58:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L148) *style:* **Commas should always have a space after.**
```r
      filename_base, "\" tree=\"@Tree.t:", filename_base,"\"/>", sep = ""))
                                                         ^
```
[R/beastscriptr.R:148:61:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L148) *warning:* **Do not use absolute paths.**
```r
      filename_base, "\" tree=\"@Tree.t:", filename_base,"\"/>", sep = ""))
                                                            ^~
```
[R/beastscriptr.R:151:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L151) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:155:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L155) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" spec=\"Coalescent\">", sep = ""))
                    ^
```
[R/beastscriptr.R:159:38:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L159) *warning:* **Do not use absolute paths.**
```r
      "\" spec=\"ConstantPopulation\"/>", sep = ""))
                                     ^~
```
[R/beastscriptr.R:163:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L163) *style:* **Commas should always have a space after.**
```r
      filename_base,"\"/>", sep = ""))
                    ^
```
[R/beastscriptr.R:163:24:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L163) *warning:* **Do not use absolute paths.**
```r
      filename_base,"\"/>", sep = ""))
                       ^~
```
[R/beastscriptr.R:167:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L167) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:169:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L169) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" name=\"distribution\" x=\"@birthRate2.t:",
                    ^
```
[R/beastscriptr.R:170:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L170) *style:* **Commas should always have a space after.**
```r
      filename_base,"\">", sep = ""))
                    ^
```
[R/beastscriptr.R:172:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L172) *style:* **lines should not be more than 80 characters.**
```r
      "                <Uniform id=\"Uniform.0\" name=\"distr\" upper=\"1000.0\"/>")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:172:81:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L172) *warning:* **Do not use absolute paths.**
```r
      "                <Uniform id=\"Uniform.0\" name=\"distr\" upper=\"1000.0\"/>")
                                                                                ^~
```
[R/beastscriptr.R:175:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L175) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" name=\"distribution\" x=\"@relativeDeathRate2.t:",
                    ^
```
[R/beastscriptr.R:176:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L176) *style:* **Commas should always have a space after.**
```r
      filename_base,"\">", sep = ""))
                    ^
```
[R/beastscriptr.R:178:65:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L178) *warning:* **Do not use absolute paths.**
```r
      "                <Uniform id=\"Uniform.01\" name=\"distr\"/>")
                                                                ^~
```
[R/beastscriptr.R:181:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L181) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:186:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L186) *style:* **Commas should always have a space after.**
```r
      filename_base,"\">", sep = ""))
                    ^
```
[R/beastscriptr.R:187:76:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L187) *warning:* **Do not use absolute paths.**
```r
    text <- c(text, "                <OneOnX id=\"OneOnX.0\" name=\"distr\"/>")
                                                                           ^~
```
[R/beastscriptr.R:191:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L191) *style:* **lines should not be more than 80 characters.**
```r
  text <- c(text, "        <distribution id=\"likelihood\" spec=\"util.CompoundDistribution\">")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:193:19:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L193) *style:* **Commas should always have a space after.**
```r
    filename_base,"\" spec=\"TreeLikelihood\" data=\"@",filename_base,
                  ^
```
[R/beastscriptr.R:193:57:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L193) *style:* **Commas should always have a space after.**
```r
    filename_base,"\" spec=\"TreeLikelihood\" data=\"@",filename_base,
                                                        ^
```
[R/beastscriptr.R:194:41:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L194) *style:* **Commas should always have a space after.**
```r
    "\" tree=\"@Tree.t:", filename_base,"\">", sep = ""))
                                        ^
```
[R/beastscriptr.R:196:19:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L196) *style:* **Commas should always have a space after.**
```r
    filename_base,"\" spec=\"SiteModel\">", sep = ""))
                  ^
```
[R/beastscriptr.R:205:19:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L205) *style:* **Commas should always have a space after.**
```r
    filename_base,"\" estimate=\"false\" lower=\"0.0\" ",
                  ^
```
[R/beastscriptr.R:208:19:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L208) *style:* **Commas should always have a space after.**
```r
    filename_base,"\" spec=\"JukesCantor\"/>", sep = ""))
                  ^
```
[R/beastscriptr.R:208:43:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L208) *warning:* **Do not use absolute paths.**
```r
    filename_base,"\" spec=\"JukesCantor\"/>", sep = ""))
                                          ^~
```
[R/beastscriptr.R:223:38:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L223) *warning:* **Do not use absolute paths.**
```r
    filename_base, "\" weight=\"3.0\"/>", sep = ""))
                                     ^~
```
[R/beastscriptr.R:227:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L227) *style:* **Commas should always have a space after.**
```r
    "tree=\"@Tree.t:",filename_base,"\" weight=\"3.0\"/>", sep = ""))
                      ^
```
[R/beastscriptr.R:227:37:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L227) *style:* **Commas should always have a space after.**
```r
    "tree=\"@Tree.t:",filename_base,"\" weight=\"3.0\"/>", sep = ""))
                                    ^
```
[R/beastscriptr.R:227:55:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L227) *warning:* **Do not use absolute paths.**
```r
    "tree=\"@Tree.t:",filename_base,"\" weight=\"3.0\"/>", sep = ""))
                                                      ^~
```
[R/beastscriptr.R:230:43:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L230) *style:* **Commas should always have a space after.**
```r
    "\" spec=\"Uniform\" tree=\"@Tree.t:",filename_base,
                                          ^
```
[R/beastscriptr.R:231:24:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L231) *warning:* **Do not use absolute paths.**
```r
    "\" weight=\"30.0\"/>", sep = ""))
                       ^~
```
[R/beastscriptr.R:232:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L232) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:233:62:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L233) *style:* **Commas should always have a space after.**
```r
  text <- c(text, paste("    <operator id=\"SubtreeSlide.t:",filename_base,
                                                             ^
```
[R/beastscriptr.R:234:48:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L234) *style:* **Commas should always have a space after.**
```r
    "\" spec=\"SubtreeSlide\" tree=\"@Tree.t:",filename_base,
                                               ^
```
[R/beastscriptr.R:235:24:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L235) *warning:* **Do not use absolute paths.**
```r
    "\" weight=\"15.0\"/>", sep = ""))
                       ^~
```
[R/beastscriptr.R:237:56:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L237) *style:* **Commas should always have a space after.**
```r
  text <- c(text, paste("    <operator id=\"narrow.t:",filename_base,
                                                       ^
```
[R/beastscriptr.R:238:44:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L238) *style:* **Commas should always have a space after.**
```r
    "\" spec=\"Exchange\" tree=\"@Tree.t:",filename_base,
                                           ^
```
[R/beastscriptr.R:239:24:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L239) *warning:* **Do not use absolute paths.**
```r
    "\" weight=\"15.0\"/>", sep = ""))
                       ^~
```
[R/beastscriptr.R:241:54:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L241) *style:* **Commas should always have a space after.**
```r
  text <- c(text, paste("    <operator id=\"wide.t:",filename_base,
                                                     ^
```
[R/beastscriptr.R:243:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L243) *warning:* **Do not use absolute paths.**
```r
    "\" weight=\"3.0\"/>", sep = ""))
                      ^~
```
[R/beastscriptr.R:245:63:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L245) *style:* **Commas should always have a space after.**
```r
  text <- c(text, paste("    <operator id=\"WilsonBalding.t:",filename_base,
                                                              ^
```
[R/beastscriptr.R:246:49:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L246) *style:* **Commas should always have a space after.**
```r
    "\" spec=\"WilsonBalding\" tree=\"@Tree.t:",filename_base,
                                                ^
```
[R/beastscriptr.R:247:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L247) *warning:* **Do not use absolute paths.**
```r
    "\" weight=\"3.0\"/>", sep = ""))
                      ^~
```
[R/beastscriptr.R:250:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L250) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:253:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L253) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" scaleFactor=\"0.75\" weight=\"3.0\"/>", sep = ""))
                    ^
```
[R/beastscriptr.R:253:60:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L253) *warning:* **Do not use absolute paths.**
```r
      filename_base,"\" scaleFactor=\"0.75\" weight=\"3.0\"/>", sep = ""))
                                                           ^~
```
[R/beastscriptr.R:258:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L258) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" scaleFactor=\"0.75\" weight=\"3.0\"/>", sep = ""))
                    ^
```
[R/beastscriptr.R:258:60:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L258) *warning:* **Do not use absolute paths.**
```r
      filename_base,"\" scaleFactor=\"0.75\" weight=\"3.0\"/>", sep = ""))
                                                           ^~
```
[R/beastscriptr.R:261:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L261) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:265:69:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L265) *warning:* **Do not use absolute paths.**
```r
      "\" scaleFactor=\"0.75\" spec=\"ScaleOperator\" weight=\"3.0\"/>",
                                                                    ^~
```
[R/beastscriptr.R:272:52:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L272) *warning:* **Do not use absolute paths.**
```r
  text <- c(text, "        <log idref=\"posterior\"/>")
                                                   ^~
```
[R/beastscriptr.R:273:53:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L273) *warning:* **Do not use absolute paths.**
```r
  text <- c(text, "        <log idref=\"likelihood\"/>")
                                                    ^~
```
[R/beastscriptr.R:274:48:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L274) *warning:* **Do not use absolute paths.**
```r
  text <- c(text, "        <log idref=\"prior\"/>")
                                               ^~
```
[R/beastscriptr.R:276:19:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L276) *style:* **Commas should always have a space after.**
```r
    filename_base,"\"/>", sep = ""))
                  ^
```
[R/beastscriptr.R:276:22:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L276) *warning:* **Do not use absolute paths.**
```r
    filename_base,"\"/>", sep = ""))
                     ^~
```
[R/beastscriptr.R:279:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L279) *warning:* **Do not use absolute paths.**
```r
    filename_base, "\"/>", sep = ""))
                      ^~
```
[R/beastscriptr.R:281:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L281) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:283:25:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L283) *warning:* **Do not use absolute paths.**
```r
      filename_base, "\"/>", sep = ""))
                        ^~
```
[R/beastscriptr.R:285:25:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L285) *warning:* **Do not use absolute paths.**
```r
      filename_base, "\"/>", sep = ""))
                        ^~
```
[R/beastscriptr.R:287:25:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L287) *warning:* **Do not use absolute paths.**
```r
      filename_base, "\"/>", sep = ""))
                        ^~
```
[R/beastscriptr.R:290:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L290) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:292:20:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L292) *style:* **Commas should always have a space after.**
```r
    text <- c(text,paste("        <parameter idref=\"popSize.t:",
                   ^
```
[R/beastscriptr.R:293:21:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L293) *style:* **Commas should always have a space after.**
```r
      filename_base,"\" name=\"log\"/>", sep = ""))
                    ^
```
[R/beastscriptr.R:293:37:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L293) *warning:* **Do not use absolute paths.**
```r
      filename_base,"\" name=\"log\"/>", sep = ""))
                                    ^~
```
[R/beastscriptr.R:294:20:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L294) *style:* **Commas should always have a space after.**
```r
    text <- c(text,paste("        <log idref=\"CoalescentConstant.t:",
                   ^
```
[R/beastscriptr.R:295:25:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L295) *warning:* **Do not use absolute paths.**
```r
      filename_base, "\"/>",sep = ""))
                        ^~
```
[R/beastscriptr.R:295:29:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L295) *style:* **Commas should always have a space after.**
```r
      filename_base, "\"/>",sep = ""))
                            ^
```
[R/beastscriptr.R:297:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L297) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"    </logger>")
                 ^
```
[R/beastscriptr.R:298:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L298) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:299:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L299) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"    <logger id=\"screenlog\" logEvery=\"1000\">")
                 ^
```
[R/beastscriptr.R:300:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L300) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"        <log idref=\"posterior\"/>")
                 ^
```
[R/beastscriptr.R:300:51:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L300) *warning:* **Do not use absolute paths.**
```r
  text <- c(text,"        <log idref=\"posterior\"/>")
                                                  ^~
```
[R/beastscriptr.R:301:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L301) *style:* **lines should not be more than 80 characters.**
```r
  text <- c(text,"        <log id=\"ESS.0\" spec=\"util.ESS\" arg=\"@posterior\"/>")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:301:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L301) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"        <log id=\"ESS.0\" spec=\"util.ESS\" arg=\"@posterior\"/>")
                 ^
```
[R/beastscriptr.R:301:81:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L301) *warning:* **Do not use absolute paths.**
```r
  text <- c(text,"        <log id=\"ESS.0\" spec=\"util.ESS\" arg=\"@posterior\"/>")
                                                                                ^~
```
[R/beastscriptr.R:302:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L302) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"        <log idref=\"likelihood\"/>")
                 ^
```
[R/beastscriptr.R:302:52:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L302) *warning:* **Do not use absolute paths.**
```r
  text <- c(text,"        <log idref=\"likelihood\"/>")
                                                   ^~
```
[R/beastscriptr.R:303:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L303) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"        <log idref=\"prior\"/>")
                 ^
```
[R/beastscriptr.R:303:47:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L303) *warning:* **Do not use absolute paths.**
```r
  text <- c(text,"        <log idref=\"prior\"/>")
                                              ^~
```
[R/beastscriptr.R:304:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L304) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"    </logger>")
                 ^
```
[R/beastscriptr.R:305:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L305) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:306:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L306) *style:* **Commas should always have a space after.**
```r
  text <- c(text,paste("    <logger id=\"treelog.t:", filename_base,
                 ^
```
[R/beastscriptr.R:308:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L308) *style:* **Commas should always have a space after.**
```r
  text <- c(text,paste("        <log id=\"TreeWithMetaDataLogger.t:",
                 ^
```
[R/beastscriptr.R:310:38:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L310) *style:* **Commas should always have a space after.**
```r
    "tree=\"@Tree.t:", filename_base,"\"/>", sep = ""))
                                     ^
```
[R/beastscriptr.R:310:41:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L310) *warning:* **Do not use absolute paths.**
```r
    "tree=\"@Tree.t:", filename_base,"\"/>", sep = ""))
                                        ^~
```
[R/beastscriptr.R:311:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L311) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"    </logger>")
                 ^
```
[R/beastscriptr.R:312:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L312) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:313:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L313) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"</run>")
                 ^
```
[R/beastscriptr.R:314:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L314) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"")
                 ^
```
[R/beastscriptr.R:315:18:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L315) *style:* **Commas should always have a space after.**
```r
  text <- c(text,"</beast>")
                 ^
```
[R/beastscriptr.R:334:23:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L334) *warning:* **no visible global function definition for 'read.FASTA'**
```r
  sequences_dnabin <- read.FASTA(fasta_filename)
                      ^~~~~~~~~~
```
[R/beastscriptr.R:343:3:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L343) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/beastscriptr.R:345:30:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L345) *style:* **Commas should always have a space after.**
```r
    sequences <- c(sequences,sequence)
                             ^
```
[R/beastscriptr.R:348:33:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L348) *style:* **Commas should always have a space after.**
```r
  table <- data.frame(sequences,row.names = labels)
                                ^
```
[R/beastscriptr.R:349:4:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L349) *style:* **Commented code should be removed.**
```r
  #table <- data.frame(cbind(labels,sequences))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:350:4:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L350) *style:* **Commented code should be removed.**
```r
  #names(table) <- c("label","sequence")
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:351:4:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L351) *style:* **Commented code should be removed.**
```r
  #rownames(table) <- labels
   ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/beastscriptr.R:356:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/R/beastscriptr.R#L356) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[tests/testthat/test_beastscriptr.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L90) *style:* **lines should not be more than 80 characters.**
```r
  expect_equal(file.exists(input_fasta_filename), TRUE) # Input file must be found
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test_beastscriptr.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L91) *style:* **lines should not be more than 80 characters.**
```r
  expect_equal(file.exists(expected_output_xml_filename), TRUE) # Expected file must be present
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test_beastscriptr.R:103:32:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L103) *style:* **Commas should always have a space after.**
```r
  if (!identical(created_lines,expected_lines)) {
                               ^
```
[tests/testthat/test_beastscriptr.R:107:40:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L107) *style:* **Commas should always have a space after.**
```r
  expect_equal(identical(created_lines,expected_lines), TRUE)
                                       ^
```
[tests/testthat/test_beastscriptr.R:118:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L118) *style:* **lines should not be more than 80 characters.**
```r
  expect_equal(file.exists(input_fasta_filename), FALSE) # Input file must not be present, otherwise BEAST2 will prompt the user when creating .trees files
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test_beastscriptr.R:133:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L133) *style:* **lines should not be more than 80 characters.**
```r
  expect_equal(file.exists(input_fasta_filename), TRUE) # Input file must be found now
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test_beastscriptr.R:134:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L134) *style:* **lines should not be more than 80 characters.**
```r
  expect_equal(file.exists(output_xml_filename), FALSE) # Output file must not be present, otherwise BEAST2 will prompt the user
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test_beastscriptr.R:145:59:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L145) *style:* **Commas should always have a space after.**
```r
  cmd <- paste("java -jar ~/Programs/beast/lib/beast.jar",output_xml_filename)
                                                          ^
```
[tests/testthat/test_beastscriptr.R:148:1:](https://github.com/richelbilderbeek/beastscriptr/blob/6155ceecdbed2862fe2c1a9594d8a49cd3dc0413/tests/testthat/test_beastscriptr.R#L148) *style:* **lines should not be more than 80 characters.**
```r
  print("Tested to create an XML file successfully. If you saw BEAST2 output, it worked!")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```


@SakataGintokiYT  I have Already fixed thatn i just waiting vlj confim ^^


Should be chown'd back to the user:group first I think.


Ok thanks!


:heart_eyes: :heart: I love you


The V3 versions are odd and I don't think we've ever reconsidered how `Resource`s are handled the way we did in the V2 APIs.


hi round


下一篇[文章](#待定)将论述如何为小猫应用的各部分编码


:trollface:


Shouldn't the hash be 0s for a deleted file?


seems like all the code that follows would be much simpler if this was `msg[6:]`


第一次试译


I don't think we need to be so careful with `defn-traced` and can just mutate the `defn`s will glee


This line will panic if the template doesn't parse correctly. But you also return an error from this function? Do one or the other, certainly not both. And if there's already an error being returned than checking the error from template parse is better in all ways essentially.


OCRE


The commit introduced a bug in ft_plot_slice, where default resolution was defined after it was necessary for determining 'dointerp'. I'll create a pull request for the fix. I thought it was related to bug3089, hence the name of the branch bugrefix3089, but not sure it's actually related to bug3089.


I guess it could be. I think normally I would suggest that yes it should be on the next line. Fixing.


Can you call this `lockbox_download_dir` instead?


Wouldn't you want a path test to ensure the file still exists?


Hopefully this is acceptable


Opened defect: https://github.com/voxpupuli/puppet-rundeck/issues/196

My suggestion would be to leave .ssh alone for now, but I'd like some more discussion on this.  I'll probably take a look at fixing this myself if I have time later this week and we can discuss it a bit more in the PR...


Please replace "/v2/api-docs" by Swagger2Controller.DEFAULT_URL, it could be done also in GatewaySwaggerResourcesProvider


The commit introduced a bug in ft_plot_slice, where default resolution was defined after it was necessary for determining 'dointerp'. I'll create a pull request for the fix. I thought it was related to bug3089, hence the name of the branch bugrefix3089, but not sure it's actually related to bug3089...


But this not tasks. This notification. I know with notification plasma freeze,  but  i don't know why.
https://bugs.kde.org/show_bug.cgi?id=360173


r+


Missing chown.


I believe this if check is unnecessary. logger.debug() is no op if log level is not "debug".

(same applies to all similar checks below)


Why is there a semicolon at the end of this line?

/cc @junghans


LOGGER.debug is a noop but the string building isn't a noop as far as I know. This means that without the if check, the string is built each time through the method. Thats a lot of string objects when benchmarking.


Well, Alex has a legitamate reason for him to not disable a C++ compiler, and _**do not show him your github!!!!!!!!**_


Looks good.


similar to above comment, this if (isDebugEnabled()) check seems to be unnecessary.


However, this fix is useless here since we use Negotiation.java in the custom code.... I'll address this in a separate fix for UAR-1857.
Please reset this file in the foundation to the original code.


You going to do anything with that stack trace?


You don't really need to do this - the `DefaultTestDatabase` already [saves out a bunch of entities](https://github.com/broadinstitute/rawls/blob/develop/src/test/scala/org/broadinstitute/dsde/rawls/db/DbTestFixture.scala#L330), so you could just e.g. assert on `getEntityTypeCount("sample") == entityDAO.list(entityType = "sample").size()`.

(though I'm iffy on using a DAO method to test another one; maybe "the number returned is 7" is a better test in this case. dunno)


Is it really "challange" or is there a typo Hubert?


int aus?


@nsh87 Trying to create data set that is "a high-dimensional (like 9-16 dims) binary one" with known number of clusters. Not finding anything obvious online. I will keep looking but figured that I would check with you first.


Minimum size is 2M, round to closest extent makes it 4M.

We do grow it to take all the physical partition size afterwards.


Would wait() and notify() not be more appropriate for this?


Example Card


This is special in the fact that I wanted to use this library to log the exception, but now I can't use it at all since the error message is so generic :p https://docs.djangoproject.com/en/1.8/topics/logging/#django-security

It's fine if there isn't an explicit `except` line for this, however the current implementation provides a really bad experience since it suppresses the traceback, making the logging useless in this case. Is there a way to provide still log traceback information (maybe just without a template) if an exception is thrown?


That's entirely up to you. It depends if you want randomization tables to be part of PyCap.


Consider moving the trailing comment above the code.


#### 依赖


And I forgot my laptop at home, so the updates I assume have not happened to my computer,
And let us hope that someone has a programming Maryville Matters Project in Python, so a legitimate reason to have python re-enabled. Well, the CSE course uses Python :)


@ArchRobison I wanted your opinion on whether this commit should be applied, or whether you considered it just a work in progress.


nice one


New samples (not present in previous RNAseqLibrary versions):

GTEX-11NV4-2126-SM-5N9DS
GTEX-11OC5-0726-SM-5P9JK
GTEX-11TUW-3126-SM-5GU4Y
GTEX-12WSA-2926-SM-5EQ4D
GTEX-12ZZW-2926-SM-5LZUP
GTEX-131XW-3126-SM-5LZUC
GTEX-139T8-1026-SM-5J2MC
GTEX-13NYS-3126-SM-5KLYV
GTEX-13PL6-3126-SM-5LUAR
GTEX-13PVQ-3026-SM-5SI93
GTEX-145LS-3126-SM-5Q5BY
GTEX-ZE7O-3126-SM-5HL5X
GTEX-ZYY3-3126-SM-5SI9L


115273495-Suspect-controller-type-in-MixedAirUpdateOAController-when-contaminant-simulation-is-active-#5535 (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-IntegrationCoverage-Debug: OK (1579 of 1579 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-70.85%25-green.svg)


r+


Usually you need to have a really specific reason to use LinkedList over ArrayList - like a case with much more additions - and specifically! removals than lookups. For most cases a simple ArrayList works better. When we happen to 'around' know the size of the list, it is undoubtedly better.


Una mica per coherencia amb els anteriors casos. De fet es una ampliacio del cas massa agressiu amb un sol condicional. Em resulta mes entenedor com ho he fet i no cal fer la segona operacio si no es compleix la primera.


The `DecimalSchema` will also need `to_json` function to generate the Avro json representation.


+1 Snif.


You still need to make sure approved=False and fuzzy=False.


Looks great! Thanks.


This is a good point. General rule about nulls and collections in java - never return a null for a collection. I.e. methods like `List<String> getSomeList()` should result in empty list if these are empty. And also it is a good idea to create such collections at the very start.

If you want to return an empty collection (in test, or for a specific case, for example, there is a very nice method `Collections.emptyList()` and related.


Do we want to include the start year for copy right statement or should we simply say 2016? This file is pretty old, we might have touched it before 2015.


Also should be in the HH namespace, not prefixed.


God I hope that MinGW is not blocked.


Estaven junts i els havia separat. No haviem quedat que els commits de format anaven sempre separats dels que canvien codi?


No quotes needed around `{{.PreStaging}}`? Seems dangerous.


Here can we now use a dict lookup `callback = runtimeInstances.get(widget_id, None)` to avoid looping over the runtimeInstances?


Well, you can email raulston, and USB works fine. It is a legit reason for the program!


why was this deleted?


I couldn't run the specs because of this association. The test database doesn't have any `users` table so we'll need to run somehow the migrations of the engines this one depends on.


But what did they block?


Alex! **HW #30** is genius practice. But it was very hard didn't stop and didn't give up. We are Russians and we need understanding and knowledge...


I don't see any reason to toggle this, do you?


hm? really?


it reads better if you split this line into multiple lines.


ich habe lieber 2 spaces :P


By that I mean, I don't see any reason to turn it on/off at specific periods. Just let it run the entire script with `-e`?


I wasn't sure about the Amazon copyright and then the YCSB copyright. That is straight copied from PR #481 from @allanbank. Maybe @busbey has an idea of what the copyright should be?


It’s all showing up now. No idea why it was not working across IE, Chrome, and my phone browse. But it’s definitely there when I checked again today.

From: Karvell Li
Sent: Monday, March 7, 2016 4:21 PM
To: 'Microsoft/Office-Online-Test-Tools-and-Documentation' <reply@reply.github.com>; Microsoft/Office-Online-Test-Tools-and-Documentation <Office-Online-Test-Tools-and-Documentation@noreply.github.com>
Subject: RE: [Office-Online-Test-Tools-and-Documentation] Merge branch 'patch-1' (a36a5d7)

I used in private mode and it’s still showing the old stuff. Are you sure the new content has been published?

From: Tyler Butler [mailto:notifications@github.com]
Sent: Wednesday, March 2, 2016 5:28 PM
To: Microsoft/Office-Online-Test-Tools-and-Documentation <Office-Online-Test-Tools-and-Documentation@noreply.github.com<mailto:Office-Online-Test-Tools-and-Documentation@noreply.github.com>>
Cc: Karvell Li <karvell@microsoft.com<mailto:karvell@microsoft.com>>
Subject: Re: [Office-Online-Test-Tools-and-Documentation] Merge branch 'patch-1' (a36a5d7)

Make sure you clear your browser cache...

—
Reply to this email directly or view it on GitHub<https://github.com/Microsoft/Office-Online-Test-Tools-and-Documentation/commit/a36a5d7aec526985849d2c487100b53b0dd1e8a0#commitcomment-16462770>.


Ah good catch tat was in the original PR too I think. I'll update.


develop (energy-plus) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-IntegrationCoverage-Debug: OK (1579 of 1579 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-70.85%25-green.svg)


SGTM. Let's do the check then.


Hmm, reading through docs it looks like this thing won't grow automatically so we should keep it at 1GB...


LGTM, some (very) minor comments but ready for merge.


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-MacOS-10.9-clang: OK (2129 of 2129 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg)


Your spec description should be able to tell you everything about the test (in 100 years from now)
You can add what to expect under what conditions.
`it "is not valid when required data is missing"`


Please check declarations/overrides to this method. Is this one already in use somewhere? If not we should probably change getTypeName to getName because we are obviously referring to the name of the type.


juste pour fair un test .
à suprimer.


Seriously?


Cool!


Currently the schema is not validated in each individual schema class but in `make_avsc_object` function (sort of). We'll need to add the logic in the `make_avsc_object` function for logical types.


Oh and your original comment was about the comment, not the code and yeah the value was wrong in there :)


This wouldn't work.

If you iterate over a collection, and modify it at the same time, what is the state then? Consider classical loop  like `for (int i=0; i < list.Size(); i++) {if(i==4) list.insert(0, 'lala')}`.

How would it work? Should it account for the collection size change? textually, it would get the element 4 twice, since inserting something to the start would shift it - which is probably not a desired behaviour.

What java does in its `Collections`, it throws in a `ConcurrentModificationException` in case a list which is iterated on changes (either in loop code, or even in a separate thread) to signalize about such doubtful situation. Probably, you could either use iterators, and append to the end (old way), or create a separate list of generators, and them all at once after the creation is done.


Oh. I didn't know that keyword existed. Dope.

Also, I misspelled "missing" as "misisng"...


Done 8b2f9ab


GLIBCXX is version 20151129 but I don't know how to detect.
Can it be defined as a constant in makefile so the user select proper library definition?


Nobody input this missing (in your example of Selenium.java) package name from first attempt!


Well, that's exactly observed behavior - now we are getting a neat

```
Exception in thread "AWT-EventQueue-0" java.util.ConcurrentModificationException
	at java.util.HashMap$HashIterator.nextNode(HashMap.java:1429)
	at java.util.HashMap$ValueIterator.next(HashMap.java:1458)
	at kcl.teamIndexZero.traffic.simulator.data.GraphConstructor.addTrafficGenerators(GraphConstructor.java:303)
	at kcl.teamIndexZero.traffic.simulator.data.GraphConstructor.createGraph(GraphConstructor.java:90)
	at kcl.teamIndexZero.traffic.simulator.data.GraphConstructor.<init>(GraphConstructor.java:47)
	at kcl.teamIndexZero.traffic.gui.SimulatorGui.startSimulatorWindow(SimulatorGui.java:62)
	at kcl.teamIndexZero.traffic.gui.components.ChooserDialog$1.actionPerformed(ChooserDialog.java:57)
	at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
	at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
	at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
	at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
```


Fair point.

Also note misisng -> missing


Easy, ging mehr um das Komma. :D Hat mein Beautify gemacht!


à mettre dans le controler?


Some rework might be in order here. I would be fine with basing the name on the id. I would not be fine with basing the id on the name. It sounds unsafe and reversed.

So maybe we should go ahead and decide that the name is in fact the id.

However... what if the id is some sort of database identifier + the name of the collection?


Hmm, da war vorher noch ne Config drin.


This is not safe to include since "f__AnonymousType104" can change from run to run.


TeamCity Glyssen :: Glyssen-master Continuous [Build 0.2.9.0deb713bbc28a2366593b0290a33c70236c2abbb](http://build.palaso.org/viewLog.html?buildId=70091&buildTypeId=bt431) outcome was **SUCCESS**
Summary: Tests passed: 1033, ignored: 12 Build time: 00:08:51


I want to see some override annotations here :smile_cat:


Pls. I wanna have override annotations :smile_cat:


rajouter une méthode setToken


Trying to make it `Expression`


Not `filepath.Join`?


Wait @Yive this was for Dragon API compat D:


The constructor should also validate if the given precision and scale are valid values.


I'm glad you like the inputs! :D

For the copy-paste result, would it be easier to just have the result be the language JSON? That way we could more easily merge in new languages.


Lets try this again.


I tend to avoid the before blocks and use let instead.
You can read about here: http://betterspecs.org/


à suprimer??
qu'elle utilité??
utilisé par openclassroom dans le tuto mvc


Hello, what did they block???????????????
In response to your comment on "THEY ... BLOCKED IT"


I initially introduced that test, but then opted for this instead `@test_throws DimensionMismatch Base.LinAlg.axpy!(α,x,collect(1:2),['a','b'],collect(1:3))`

Also the tests from the file kinda don't make sense since `*` and `+` aren't even defined for Chars.


Some of the validation can be moved to the constructor and others probably may need to be moved to `make_avsc_object` function.


I consider it done.  I'm just waiting semi-indefinitely for a LGTM review from the LLVM community before committing it to LLVM trunk.


I don't actually want all of this added cause of the gemfile lock issue, but wanted to know if what I commented out in the app controller is what you wanted remove?


Testing switch config pull.


This title could be better...


So why should he not show Mr. Raulston his Github?  By the way, I'm making a ascii graphical version of tic-tac-toe with Python.  It's surprisingly hard.  All I have to do to finish is to implement the rules to win at this point.  Then I would also like to put AI into it.  It's not that fun of a game, but it's been fun coding it.  I can post the code if you want.


I've rewritten this method as proposed-  we first collect `TrafficGenerator` instances to an intermediate collection, and then push them out to the main features map. Nice lambda :)

```
        for (Feature road : mapFeatures.values()) {
            if (road instanceof Road) {
                if (!tools.checkForwardLinks(((Road) road).getForwardSide()) || !tools.checkForwardLinks(((Road) road).getBackwardSide())) {
                    TrafficGenerator tg = new TrafficGenerator(new ID("TrafficGenerator:" + this.trafficGenerators.size()));
                    tg.linkRoad((Road) road);
                    this.trafficGenerators.add(tg);
                    LOG.log("<GRAPH> Created a TrafficGenerator ('", tg.getID(), "').");
                }
            }
        }

        this.mapFeatures.putAll(trafficGenerators.stream().collect(
                Collectors.toMap(
                        TrafficGenerator::getID,
                        Function.identity()))
        );

```


Yeah, I can add quotes, but the the `PreStaging` name is hardcoded in this script (`pre-hook.sh`), and I doubt we switch to a name that will need quoting.

I'll still add quotes to be on the defensive side anyways.


develop (energy-plus) - Win64-Windows-7-VisualStudio-12: Build Failed

![Build Badge](http://img.shields.io/badge/build%20status-failing-red.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-39.08%25-red.svg)


I wanted this test to resist any changes in the DbTestFixture so I added a new entity type specifically for the test. If you think that's a waste and it's the responsibility of whomever alters the DbTestFixture to fix the test then I'm fine removing the extra stuff


@DeepakSumo @deborshisaha @alex-nalivko  video of the app as i see it on MY** machine
pls verify if the app breaks for you


And since Mr. Raulston blocked Sublime Text, I have to have a USB with me constantly to edit code on my school laptop.


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.77](http://build.clear-measure.com/viewLog.html?buildId=7658&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


creer une class qui contiendra la référence de toute les image icon?? ou utiliser "build/classes/image Scrabble/"+token.getCharacter()+".png"
// different pour les cases (null, l*2,l*3,m*2,m*3)[créer des images??]


We should remove line 8 too.  The quirks in the `Gemfile.lock` are totally fine.  Robert updated the `Gemfile` without running `bundle install`, which means the file should be regenerated.


@Tomaco the `if user_signed_in?` template logic looks good :+1:
You can even improve this by extracting that piece of html into a partial.
Remeber the best way to reduce complexity is to split things into smaller chunks :ice_cream:


Referido al Plugin de Streamup, tenes razón le puse mal el nombre.
Ahora le agregue además un listado de inicio para que sea mas comodo de usar.
Podes descargarlo desde aca: https://mega.nz/#!zkBnhIDB!fiaCzlk5Qu4EU9Sq8yNgkp4k4GRToYm3cpBwyRtmwXQ
Recuerda leer el archivo LEEME.txt para entender como usarlo.
En cuanto a lo de que ahora los archivos aceptan el carácter "]" me referia a que ahora cuando uno va a Abrir fuente > Archivo se puede seleccionar archivos que contengan ] en el nombre, antes daba error.


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8: OK (2167 of 2167 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg)


@TheGrits Another thing to consider is allowing the translator to select the language they're translating the description into, and then using a lookup table of some sort, we could get the language code and completely construct the JSON for the l10n.js file. (we'd have to find a way to auto-escape quote marks, but that's not a huge problem).


@phil-monroe here's a cells example, have a look if you like.
You can use cells at any level, be it on a sidebar link level, or for a whole page.
I'm very open to other ways of doing Rails helper replacements, though.

Docs: http://trailblazer.to/gems/cells/
Unfortunately @apotonick often comes up with new names and concepts, which makes things confusing.


That means the hooks will also be running with `-e`.  I don't know if that is what people would expect.  I would rather they add `set -e` to their hook script, if that is what they want. No?


TeamCity LabKey :: 16.1 Release :: Community :: CDS postgres 9.5 [Build 26](https://teamcity.labkey.org/viewLog.html?buildId=308931&buildTypeId=LabKey_161Release_Community_CdsPostgres94) outcome was **FAILURE**
Summary: Tests failed: 28 (21 new), passed: 18, muted: 4 Build time: 00:55:11
### Failed tests
```
org.labkey.test.Runner: org.labkey.test.tests.CDSHelpCenterTest: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyAntigenScatterPlot: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyColorStudyAndTreatmentVars: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyBoxPlots: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifySubjectCountsWithFilters: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyInfoPaneCounts: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyAntigenBoxPlot: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyBinnedPlot: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyScatterPlot: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyGutterPlotBasic: <no details avaliable>

org.labkey.test.tests.CDSVisualizationTest.verifyTimeAxisBasic: <no details avaliable>

##### there are 18 more failed tests, see build details
```


Well, I know the ascii code, and if it's in python, try clearing the screen.
And he should not show Mr. Raulston his code because of the malicious code on this repository.  (not to mention the profanitic euphemisms)
And you don't, you can use Notepad++ since it was available in the software center.


I'm thinking that we could use [Scratch's language file](https://github.com/LLK/scratch-www/blob/develop/languages.json) to populate a dropdown of potential languages to translate into.


outbuf is not necessary here remove the variable and just return this computation


All these default values should go into the ResourceMap object. I know its boring. But it's the rule.


missing space before parenthesis


Thanks for the feedback! I'll go make those changes now.


missing spaces


It is?  Well, I still don't like Notepadd++'s user interface, so I'm still going to use sublime text.  And what do you mean you know the ascii code?  And you can't clear the screen with just raw python I don't think.


Yes, should be `filepath` instead of `path`.  Just seemed consistent with the rest of the file, which uses `path.Join` 9 times and `filepath.Join` only once.

Will change.


The slowness is from your configuration.

https://github.com/jalcine/vimrc/blob/master/home/.nvimrc#L60

`set foldmethod=syntax` is really slow.
You should use FastFold plugin.

https://github.com/Konfekt/FastFold


Use UnsignedInteger for loop counters, and ++i instead of i++


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-Linux-Ubuntu-14.04-cppcheck-1.61: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg)


contiendra le score + le plateau + le chevalet + une image pour donner le token selectioné + un bouton pour passer la main au joueur suivant, piocher,retourner au menu.
(fair un eventListener pour obtnir dans quelle Jlabel ce trouve la sourie)


And he also blocked python.exe, so I can't run it even with Notepad++.


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.77](http://build.clear-measure.com/viewLog.html?buildId=7658&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) outcome was **SUCCESS**
Summary: Tests passed: 85, ignored: 13 Build time: 00:04:26


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-Linux-Ubuntu-14.04-custom_check: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg)


LGTM. Can you fix the `Authors@R` alignment while you're in there?


I doubt that you need to do this.


Powershell using subprocess
and Batch using os.system


int -> UnsignedInteger, i++ -> ++i


Typo?

`secondScriptPubKey = "OP_DROP 144 OP_LESSTHANOREQUAL"` in `sidechain-manipulation.py` and `constants.py`


+ cardsLayoutPanel.add((new GameMainJPanel(......


ps: Clear-Host (other things to resume the title)
bat: cls


Is the current state of this worthy of release? Been quite a few changes.


For the editor!


открываете a, закрываете span?


themis_components/thInput/examples/4 - In form (with validation)/html.html


Do we still need the `|| method_name =~ /=$/` in the `if` statement in this commit?

Looking at [ostruct.rb in Ruby 2.3](https://github.com/ruby/ruby/blob/ruby_2_3/lib/ostruct.rb#L174-L177), it seems like they handle writer methods as well as readers:
```ruby
  def respond_to_missing?(mid, include_private = false)
    mname = mid.to_s.chomp("=").to_sym
    @table.key?(mname) || super
  end
```


Well, if he can disable single program files, we're all doomed!


Batch is blocked, so I can't do that.  Also, all os.system commands are blocked to my knowledge.


Niezbędne?


using Subprocess module, I ran powershell to do stuff


The following doc(s) have been deployed to the [allenfearm](http://allenfearm-static-docs.pantheonsite.io/docs) Multidev environment:
- [docs/articles/sites/newrelic/new-relic-performance-analysis](http://allenfearm-static-docs.pantheonsite.io/docs/articles/sites/newrelic/new-relic-performance-analysis)


AND I KNOW BATCH IS BLOCKED


Fair. I was initially worried that this wouldn't catch a snafu in the pipe code (e.g. failing to limit by entity type), but then I realised there's already a bunch of entities in the fixture.

:+1: I think what you've done here is fine, now I've thought about it. Thanks for the rationale.


@expez all fixed I think. will check callsites to make sure nil not causing any problems.

meanwhile the question remains: is this acceptable to fix #133 ?


os.system runs on batch


(French mother tongue here)
"Activer/désactiver l'affichage des onglets de sélection des tampons."


I think this is relic from the times when we used `ObjectCached` for caching function spaces.


asd


If you are on your school laptop, GET OFF!!!!!


Why?


TeamCity OSS :: Kubernetes Mesos :: 4 - Smoke Tests [Build 18659](https://teamcity.mesosphere.io/viewLog.html?buildId=157433&buildTypeId=Oss_KubernetesMesos_5SmokeTestsDockerMesos&guest=1) outcome was **FAILURE**
Summary: Exit code 1 Build time: 00:05:05


RAULSTON CAN ACCESS IT FROM HOME


GitHub Commands: http://readwrite.com/2013/09/30/understanding-github-a-journey-for-beginners-part-1


No, the first one was correct : boîtes de nuit ( https://fr.wiktionary.org/wiki/bo%C3%AEte_de_nuit )


He won't, but he can


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.78](http://build.clear-measure.com/viewLog.html?buildId=7661&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


Yeah, I know but it's not like I'm doing anything bad.


added new cerebellum sample (not present in previous versions of RNAseqLibrary):
- GTEX-13FHP-0011-R11b-SM-5LZXP


He won't **control**


Well, he'll know  of me and Alex!


@ArthurVilaca Este var_dump é para subir mesmo?


Why would it matter if he knows about you and Alex?  He already can see that you guys are students.


TeamCity OSS :: Kubernetes Mesos :: 4 - Smoke Tests [Build 18660](https://teamcity.mesosphere.io/viewLog.html?buildId=157434&buildTypeId=Oss_KubernetesMesos_5SmokeTestsDockerMesos&guest=1) outcome was **FAILURE**
Summary: Exit code 1 Build time: 00:08:23


The first was wrong, second as well.
"Welcome back" translates into "Content de vous revoir" / "Heureux de vous revoir".


Huh?


The github accounts!


@ArthurVilaca Vi aqui a retirada... tá ok


@bencomp yes that had not gotten merged to develop so we didn't see it. I merged them into one (without the .0)


The `sem_init` function requires this constant, so make sure it is defined somewhere if you're removing it.


Well it beats SimplePlayer like 90% of the time...


Made some comments here. HTH


Why would that matter?  That's outside of school.


And in school for some of it!!!


What do you mean?


TeamCity OSS :: Kubernetes Mesos :: 4 - Smoke Tests [Build 18661](https://teamcity.mesosphere.io/viewLog.html?buildId=157448&buildTypeId=Oss_KubernetesMesos_5SmokeTestsDockerMesos&guest=1) outcome was **FAILURE**
Summary: Exit code 1 (new) Build time: 00:05:06


Done.

This class unfortunately exposes slightly too many methods to be maximally focused as "access to runtime portions of the global state that evaluators might be interested in", due to the desire to have it control all of that state (and thus need some way to update it when an evaluation completes)


Alex and I were in school for some of the github stuff


If the transform that produced the result is a root transform.

Done.


Done


We do need the synchronization, because multiple threads may update the PriorityQueue; but I have narrowed the synchronization


Done.


I'm not sure what you're referring to for pendingTransformCallbacks;


It's not like we're doing anything bad on our Github accounts.  That's how a lot of developers get jobs -- by showing people their Github accounts.


Split


I can't, as the keys and the evaluators don't share types. Additionally, the only reason everything here is raw is because the compile-time classes are.

commented why this is safe, however.


inlined; no more warnings


Alex, maybe


I think this is not clear enough.  There is no reference that `[<source>!]<pkg>[@<version>][#<tag>]`, `file:...` `github:...` are `<location>`


It was the best we can do unless you have a suggestion. :-)


Look at some of the batch files!!!!


Sí, es que el ejercicio me lo pedía así
Use fn and let to create a helper function and use it with map


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.78](http://build.clear-measure.com/viewLog.html?buildId=7661&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) outcome was **SUCCESS**
Summary: Tests passed: 85, ignored: 13 Build time: 00:04:11


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.79](http://build.clear-measure.com/viewLog.html?buildId=7662&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


Last commit worked, Constitution shows properly now.


Me and you are safe, but Alex, not sure


xato ketibdimi nima.


I'll look at his.  What do they do that's so bad?


Suggest `[--ambient|-A] ...` to be consistent with others. :smile:


They??????????????


Even though it says described below? What would you suggest?


what will happen when a higher version will be released and installed by users for example?


that doesn't test `axpy!` with different length `x` and `y` though


Uncloseable batch files


Ah, missed that one. Thanks.


Window spamming


Why not just match every char (`./`), otherwise it will regress in case the option gets some new prefixes?


Thanks. This is just the merge commit. I still have a lot of thinking to do about how Real is supposed to work in 2016.


I went through and checked the callers of cmdbreakinternal. The only caller that actually waits on like a waiting operation is the call to CmdDetach which didn't exist when I wrote this (it was added by you 12 days ago). The implementation of the handler for this event will call OnStopped which is the same behavior as the CmdAsync for -exec-interrupt. The easiest way to fix this would be to modify the task returned from CmdLinuxBreak to not complete the task until break mode is entered via a call to OnStopped. Feel free to file a separate bug that there is a race on detach when this code path is enabled.


We do need it because`OpenStruct#respond_to_missing?` only works for "attributes" already in the underlying `@table` hash. If we remove the part of the condition that you mention, it would no longer be possible to set a new attribute and [this test][1] would fail.

[1]: https://github.com/alphagov/smart-answers/blob/upgrade_from_ruby_2_2_4_to_ruby_2_3_0/test/unit/state_test.rb#L50-L55


Is it intended that the issue https://github.com/PocketMine/PocketMine-MP/issues/3563 is still open?


I don't think it's possible to make uncloseable batch files because you don't have to define the window in batch.  It automatically has an 'X' button to close out of batch files.  But you can make so many windows appear that you can't close out of them.


Well... that's a valid point. We could potentially make it a word char:

    $next    =~ /^$ansi_sequence_regex\+\+\+ (\w\/)?(.+?)(\e|$)/;

??


I mean a pair of batch windows


By opening another


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.79](http://build.clear-measure.com/viewLog.html?buildId=7662&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) outcome was **SUCCESS**
Summary: Tests passed: 85, ignored: 13 Build time: 00:03:52


It should be 1.5. The revised value sorry for any confusion wit the commit message.


And if he sees these conversations,
HE WILL KNOW WHAT TO BLOCK


I would just call `$iw` repeatedly until you get to an object that doesn't have that method, rather than precomputing the number of times to do this.


Yeah, but we can't get in trouble just for making batch files.  Even if they do windows spam.


ParserFeatureNotImplementedError is an exception

if it's instantiated it should be raised or else the line should be removed

but I can't merge this pull request until logging is handled completely


Haha, I just tried this, very clever and fun even if it breaks map flow a bunch. I'll post an animated gif on Doomworld once Crispy 3.3 is out if that's ok.


Ah calla, ara m'adono que els dos canvis són en dos parts diferents del codi. Pensava que era la mateixa part.

El que no acabo d'entendre és que executant el `pep8 netejahtml.py` no em dóna cap error sobre la línia 169 quan no té els espais que afegeix el _commit_. No serà cosa del PyDev enlloc del pep8?


I disagree.
https://github.com/kvirc/KVIrc/blob/ba19b75452886150c814d65e330a5c942c119f29/src/kvilib/irc/KviIrcUserEntry.cpp#L52 parser nick color and gender from real name.
With old format, it could distinguish between gender and color, but now they both look the same: `^K1^O` can be either black/transparent, or male. Worse, black/transparent will be parsed as male.

One solution would be to just drop colors if background is transparent. Another would be to forcefully add gender 0 before colors even if user set no gender and no avatar.


another line


If this new type of errors is the only one from Go that doesn't include a line number, then maybe you could just add a line number to any error that doesn't have one, instead of (re-)matching every message?


Well, Alex I think put it on another school computer, (before no cmd):
So that is in the RUP.


Wtf is actually one of my files?


till its win.doze


develop (energy-plus) - x86_64-MacOS-10.9-clang: OK (1576 of 1576 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg)


@supreet321, be careful here. This secret has been leaked to the public. I recommend rotating it immediately.


No accessing others computers without consent, and no damaging the software or the hardware "disrupting learning environment" that is the blanket statement, it was during class therefore it could have disrupted the learning environment.


ゲームオーバーの実装 #315


The DDF code formatter should make these constants double spaced


前の訳からですが、「この関数は」と補う必要はないし、「静的に示し続けます」は日本語として違和感があります。
また「この関数は...示し続けます」は少し意訳に過ぎると思います。
以下でどうでしょう？

リカバリが完了している場合は、これ(訳注：関数の戻り値)はリカバリ中に再生された最後のトランザクションの時間のまま変化しません。


You're thinking about it too hard.  Think about it this way.  If the tech people were actually really smart, they'd have 6 digit jobs.  But they're working at a school.  What does that tell you?


Something went wrong here, the following change is no longer on master https://github.com/SemanticMediaWiki/SemanticMediaWiki/commit/6f63de0936e851fccae6f57e32cbf173aa28b925.


@chochos @thradec @ckulenkampff it seems I can't simply override `sourceSets` I have defined in the parent build file. Any of you guys know how to solve this?


My attempt (not necessary better. :stuck_out_tongue: ):

```sh
typings install [<name>=]<location>

  <name>       Module name...
  <location>   The location to read from
    [<source>!]<pkg>[@version>][#<tag>]
    file:<path>
    github:<org>/<repo>....
    ...

    <source>    The registry mirror ....
    ....
```


Well, if raulston sees that, you're dead!


@azeno check https://github.com/vvvv/vvvv-sdk/pull/279


He is a good network specialist (for a school, much better than a student)


Woops messed it up


Not really.  Watch this.


Ugggh. Why does this now show in the diff.

If that one went away, I'm thinking it's probably not the only one


*poof* it's gone


Uh, what?????


TeamCity LabKey :: LabkeyModules15.3 :: Git sqlserver 2014 [Build 132](https://teamcity.labkey.org/viewLog.html?buildId=308954&buildTypeId=LabkeyModules153_GitSqlserver2014) outcome was **FAILURE**
Summary: Snapshot dependency failed: LabKey :: LabkeyModules15.3 :: build Build time: 00:00:00


TeamCity LabKey :: LabkeyModules15.3 :: Git postgres 9.4 [Build 135](https://teamcity.labkey.org/viewLog.html?buildId=308952&buildTypeId=LabkeyModules153_GitPostgres) outcome was **FAILURE**
Summary: Snapshot dependency failed: LabKey :: LabkeyModules15.3 :: build Build time: 00:00:01


Sí, pide exactamente eso


Uh... NBT?


All I had to do was delete it.


I don't know if it deleted on your end.


Delete what?


Commit message was supposed to be the following (I'm still getting the hang of committing from linux):

v5.0.378

After a nearly 2 year hiatus, I've returned with bug fixes and improvements:

BUG FIXES:
-fixed connectivity results check before script checks for update
-fix checkconnects=force reset bug
-TMR fuction now reports correct values when date/time has "invalid" numbers side-by-side
-workaround: redirect to null interferes with wmic in some cases

FUNCTIONS:
-If ManualAdapter is set, router must be associated with it for connectivity to "count" (fixes issue 35)
-Script can attempt interface modification via vbs multiple times if needed

SETTINGS:
-Reorganize settings
-Reword and add descriptions

COMPATIBILITY:
-Add containing-directory check

GUI:
-Changed wording in couple status messages
-Silenced output of :TMR_expand function
-Silenced output of powershell check

CODE CLEANUP:
-External test sites stored only as primary domain name portion
-Simplified :Ask4NET function, removed obsolete code
-Simplified Boolean settings check


Oh, I get it now


Shouldn't it be ``if (tsn->scale == 0)`` ?


Anyway, I have to go.  I won't be at school tomorrow because of an orchestra contest.  So I'll try to post the tic-tac-toe code later tonight.


This is NOT a perfect fix. If you're smart enough you can still overflow it. addStat needs to check against overflow.


変更点を確認しました。
ところで、確認中に隠されている行を展開してみたのですが、うまく展開できるようです。
GitHub側で改善があったのでしょうか？であれば、わざわざfunc.sgmlを分割する必要はないですね...


OK, I'll delete the conversation!


parts that offend Raulston


The types "Go Archers" will be said by the phone when "SPEAK!" button is tapped.


Yeah, 7565e8e3dce071036fa2b226d4bd540c00e2722f appears to also be missing, which is a random commit I checked for


Please let me know if this works for you.


Wouldn't you need to escape that plus sign?


This one is missing https://github.com/SemanticMediaWiki/SemanticMediaWiki/commit/38dd098fda15280dcb95cdfc6d4afea40fcbb8ba


Fantastic, thanks!


I think all commits made since my previous merge (7 days ago) are gone. I'm not sure how to revert this. Really confused about what happened with git


:) yeah I guess that error messages (my legacy) should just be symbols like `:antivirus_failed` `:virus_detected` or `I18n` translations so that rails app can configure them :) but yeah F**ck it :ship:  it :)


Crashes if the record is nil


Though would a scale of 0 be meaningful? If not, it's probably better to prevent being able to set 0 as scale as I suggested in the previous commit.


Since the variable `handlers` is not used anymore, this line can be removed as well.


(this was for the ELC2016 workshop at CUNY, not cogsci)


TaskCluster-GitHub: https://tools.taskcluster.net/task-graph-inspector/#dwQibqqbQbeC0f9tqEqudw


voir s'il n'y a pas possibiliter de MainFrame.setSize() dans les JLabel qu'il contient (pour des question d'esthétisme)


I've seen this before. Would you mind explaining why it's a good idea to use this approach?

And why not using `$_EXTKEY` anymore?


lgtm


Still using the `cms` key due to this issue https://github.com/NamelessCoder/typo3-repository-client/issues/1

Not sure if it's safe to remove atm.


Und sowas ist der 1337te Commit … das hätte man besser planen können :grinning:


had to change these for uniformity


Since it's in the character range square brackets, it's treated as a regular plus sign and doesn't need to be escaped.


It does; I just completed testing the [same fix](https://github.com/hb-slash/r-appveyor/commit/53e7629cb40e2cb1491c53848516388a75ff50b2#commitcomment-16575711):

* without src/: https://ci.appveyor.com/project/HenrikBengtsson/r-devices/build/1.0.63
* with src/: https://ci.appveyor.com/project/HenrikBengtsson/matrixstats/build/1.0.253

... discarding my PR.


Re-ran the code formatter on both files and pushed updates.


I revert commit again, because  not solved problem.
I think this is a problem plasma or qt, but not papirus, Because i cahnge only srtyle group-expander layers


@catterbu: I figured you could just programmatically build something. Here's a simple example in three dims:

|  x  |  y  |  z  |
|-----|----|------|
|  1 |  0  |  0  |
|  1 |  0  |  0  |
|  1 |  0  |  0  |
|  1 |  0  |  0  |
|  1 |  0  |  0  |


Another Gram matrix, probably SPD.


Same remark concerning the potential simplifications in the algebra.


Have a look at the multiplication methods that take flags for the transposition of some of the factors. It saves you copies of your matrices. I am almost sure that all these steps could be reorganized and simplified. No time to check now, but it would be worth.


cipher.txt for project euler problem 59


Oh... now I see that I responded to my own code :)  So, I'll send that PR.


Try putting a `print_r(func_get_args())` in your DataObjectTest_Fixture constructor to see what is getting passed by ::create()


It's the changes since the conflict I "resolved": 7eafa717cc4f0d9fd90bbf8f8b6bb2cb39f8ad40


This diff is autogenerated by `futurize` tool from http://python-future.org/quickstart.html#to-convert-existing-python-2-code


I would called that `packages` instead of `yunohost`, what do you think?


develop (energy-plus) - x86_64-Linux-Ubuntu-14.04-gcc-4.8: OK (1595 of 1595 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg)


Imports should always be at the top of the file (except for very specific situations)


Move imports on top ?


I fix boot.img issue, now i am recompile new build, feel to get booted cm-12.1 xD


"pass" is useless here, you can remove it


This should be left empty as default (not main) as the hub will pickup the version of this var in the `Config.groovy` file as a fallback. E.g. `default('')`. This change broke all the other hubs builds as it resulted in the default Grails skin being applied (main).


TaskCluster-GitHub: https://tools.taskcluster.net/task-graph-inspector/#Aqc36JASQrupZRrB0EE1HQ


TaskCluster-GitHub: https://tools.taskcluster.net/task-graph-inspector/#O8-vCBSnRW2r1eU_WW4W_g


All changes from "before 8 days ago" are gone.


added new samples (previously not annotated in RNAseqLibrary):

GTEX-144GO-0126-SM-5LUAO
GTEX-ZYFG-0626-SM-5GZYA


can we make this error more verbose? like "I don't unable to read /etc/debian_version for reason where "reason" is the exception raised by python.

This kind of non detailed errors messages is totally painfull for debugging and even worst for support :(


If your Normal distribution is used only to compute its CDF or its complementary CDF, it is much more efficient to use DistFunc::pNormal() as it saves you the costly initialization of the Normal object.


Big improvement. Very nice.


and here too, in fact it's only needed when there is no statement.


remove "pass"


I don't know how to run this migration. When I run rake db:migrate from the terminal in core it give me a sql authentication error. adding a database.yml file to the config directory changes nothing, and running migrations in front doesn't do anything either. This is low priority for now in any case, but an explanation would be appreciated tomorrow.


again, display the exact reason of the failure


develop (energy-plus) - x86_64-Linux-Ubuntu-14.04-cppcheck-1.61: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg)


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - i386-Windows-7-VisualStudio-12: OK (2135 of 2135 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg)


@maya this adds the zip file creation to `gulp`. You just need to run `gulp release` after running `npm install` one time.


You mean ensured


again.


You can write `logger.warning(..., exc_info=1)` to log the traceback of the exception.


I do not understand what you mean.

I've pushed the state of master before I made the merge onto this branch: https://github.com/SemanticMediaWiki/SemanticMediaWiki/tree/github

Currently trying to find how to correctly poke git now


A mi se'm fa estrany trencar la condició en blocs si només és per evitar executar la segona operació. És preferible optimitzar per la mantenibilitat del codi que per la velocitat d'execució si no hi ha un problema mesurable de rendiment.

Per exemple, d'aquesta altra manera crec que queda més clara la intenció de la condició i s'abstreu la seva implementació, que a més a més no executarà la segona part del condicional si falla la primera gràcies als curtcircuits booleans:

```
def cita_valida(s):
    return len(s.select('body > div.moz-cite-prefix')) == 1 and
        len(s.select('body > div.moz-cite-prefix *')) <= 2

if cita_valida(soup):
    tags[0].decompose()
```

Dit això, us deixo a vosaltres la decisió final.


Thank you for this! It's exactly what I needed to make sure lifx-cmd used the right interface! :)


If you can clean that up I'll merge the PR, otherwise looks like some awesome simplification and cleanup, thanks :)


![image](https://cloud.githubusercontent.com/assets/1245473/13619828/8ec460c6-e58b-11e5-8ff4-90d8998a87c2.png)

All those are no longer on master/


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-UnitTestsCoverage-Debug: OK (1021 of 1021 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-30.56%25-green.svg)


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.80](http://build.clear-measure.com/viewLog.html?buildId=7667&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


Thanks @rogeruiz! So we just need to run this command and upload it to the `0.9.0` release asset for us to be done with the zip file issue?


los canales de stramlive .to esos no hbra forma de poder verlos? es mi ultimo pedido soy jodida pero no tanto . ya nos dan demasiado.


Master tells me that my last merge was 8 days ago.


Good point. I'll add a file existence check.


All merges since then are gone.


Will fix, thanks.


:shipit:


Thanks for the tip!


This is last merge https://github.com/SemanticMediaWiki/SemanticMediaWiki/commit/5ede47f49d6f9c4a10c3f12f42ebd2cf90bd14da as far I can see which is from 8 days ago.


`_countof()` macro seems to be Windows specific - fails to build this on Linux.


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.80](http://build.clear-measure.com/viewLog.html?buildId=7667&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) outcome was **SUCCESS**
Summary: Tests passed: 85, ignored: 25 Build time: 00:04:26


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.81](http://build.clear-measure.com/viewLog.html?buildId=7668&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


/*
 * To change this license header, choose License Headers in Project Properties.
 * To change this template file, choose Tools | Templates
 * and open the template in the editor.
 */
package time1test;

/**
 *
 * @author Dell
 */
public class Time1Test {

    public static void main(String[] args) {
        // create and intialize a Time1 object
        Time1 time = new Time1();

        //output string representations of the time
        System.out.print( "The initial universal time is: ");
        System.out.println(time.toUniversalString());
        System.out.print( "The initial standard time is");
        System.out.println(time.toString());
        System.out.println();

    // change time and output updated time
    time.setTime( 13, 27, 6);
    System.out.print( "Universal time after setTime is: ");
    System.out.println(time.toUniversalString());
    System.out.print("Standard time after setTime is: ");
    System.out.println( time.toString());
    System.out.println();

    // attempt to set time with invalid values
    try
    {
       time.setTime( 99, 99, 99); // all values out of range
    }  // end try
    catch (IllegalArgumentException e)
    {
       System.out.printf(  "Exception:  %s\n\n", e.getMessage() );
    }

    // display time after attempt to set invalid values
    System.out.println( "After attempting invalid settings:");
    System.out.print("Universal time: ");
    System.out.println(time.toUniversalString());
    System.out.print("Standard time: ");
    System.out.println( time.toString());
  }
}


Something like
```
except IOError as e:
    logger.warning(m18n.n('diagnostic_debian_version_error', error=format(e)), exc_info=1)
```
?


How do i download this


Updated!


Hi there Bernhard! Here it's Thiago, the reviewer of this project at Udacity. You asked me to take another look at your custom task by email. Actually, that looks good. But if you are curious, you could also make the relationship among those tasks stronger if you connected them like that: (pseudo code)
```
task testLocalServer {
    dependsOn ':backend:appengineRun'
    mustRunAfter ':backend:appengineRun'
    dependsOn ':app:connectedAndroidTest'
    finalizedBy ':backend:appengineStop’
}
```
Making explicit that you want _this_ task to be run after _that other_.
Let's continue the conversation by email.


According to discussion with jerome on xmpp exc_info=1 seems enough.


Can you answer a question for me please. Is it because ES6 `Map` actually works by checking the memory address of a reference e.g.:

```ts
const foo = {};
const map = new Map();
map.set(foo,'123');  // Can only be done if memory address of `foo` is known. Any other shimming would require stringification of foo
```
^ this is my suspicion and I haven't been able to find a correct answer in docs (e.g. https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/Map / http://www.2ality.com/2015/01/es6-maps-sets.html). Cheers :rose:


Такой псевдофикс был, но:
-Некрасиво подсветка ховера
-Не вся область-кнопка
-Курсор-поитер только на маленьком куске


Ça fait du bien !


develop (evanweaver) - i386-Windows-7-VisualStudio-12: OK (2358 of 2398 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-98.33%25-yellow.svg)


Just:

    logger.warning(m18n.n('diagnostic_debian_version_error'), exc_info=1)

The details will be logged instead of displayed to the user. Also, not sure about the `format(e)`, I think it should be `str(e)` to output the exception as a string.


See also the user complains at http://forum.openstreetmap.org/viewtopic.php?id=53953 (in German).


what you miss is maybe the associated string: `"diagnostic_debian_version_error" : "Can't retrieve Debian version: {error}"`


Well, as I said: It's the changes since the conflict I "resolved": 7eafa71

This hopefully is fixing it: https://github.com/SemanticMediaWiki/SemanticMediaWiki/pull/1444

Certainly looks like it's re-adding the things properly

I really need to head off now. Will check the status of this first thing tomorrow


Terrible = Spend me two days to translate (every day 10 mins)
And it is a very good feature!


Завтра летально ращберусь ,есть у меня идея


@Sedwick: UMMMMM ya thats going to get fix. My bad.


TeamCity Device Info :: Tests [Build 41](http://82.35.147.206:8111/viewLog.html?buildId=217&buildTypeId=DI_Test) is now running


TeamCity Device Info :: Tests [Build 41](http://82.35.147.206:8111/viewLog.html?buildId=217&buildTypeId=DI_Test) outcome was **FAILURE**
Summary: Error while applying patch Build time: 00:00:04


bienvenue dans le Pole inutilité ! XD


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.81](http://build.clear-measure.com/viewLog.html?buildId=7668&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) outcome was **SUCCESS**
Summary: Tests passed: 85, ignored: 25 Build time: 00:03:49


Needs to be `2.3.0`


I would like to keep this due to this issue: https://github.com/NamelessCoder/typo3-repository-client/issues/1


Makes sense. It could even just be another header like "options":

```
Valid Locations:
  ...
```


Sure! :+1:


Is it an issue that the other hubs still have a main.gsp file? Ie, is it safe to delete their main.gsp file and have grails fall over quickly if this bug occurs in future. Eg. https://github.com/AtlasOfLivingAustralia/avh-hub/tree/master/grails-app/views/layouts


Isn't that risky due to special chars or even spaces?


what does isSuccess mean when item #1 succeeds, #2 fails, #3 succeeds?


TeamCity ClearMeasureBootcamp :: 1 - Integration Build [Build 2.0.82](http://build.clear-measure.com/viewLog.html?buildId=7673&buildTypeId=ClearMeasureBootcamp_1IntegrationBuild&guest=1) is now running


> See also the user complains at http://forum.openstreetmap.org/viewtopic.php?id=53953 (in German).

Why don't they just translate the preset however they want to?   I don't care what the thing says in the German localization of iD.


develop (energy-plus) - i386-Windows-7-VisualStudio-12: Build Failed

![Build Badge](http://img.shields.io/badge/build%20status-failing-red.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-39.08%25-red.svg)


@ahmedalsudani @fjvallarino This check used to be **!=** but I think it would be better to update only if the version in the remote cfg file is **greater** than the local running version.   That way we don't downgrade during E2E or manual testing. And we don't need a --no-upgrade flag.


There are many bread crumbs that point to the current page.

If we changed the condition on line 6 to this,
{% if doc.children[0].url and doc.children[0].url != current_page.url %}
then a bread crumb would only appear as a link if it points to something other than the current page.


TeamCity Device Info :: Tests [Build 42](http://82.35.147.206:8111/viewLog.html?buildId=218&buildTypeId=DI_Test) is now running


Getting the hang of this...


That's... brilliant. Why didn't I think of that!? All your suggestions sound good, we could just have a drop-down menu with the languages.


Why the extra arguments here? Is there any reason this is a static and not a constructor? If it's a static, it should be defined above the member fields.


Can we mention where this comes from (RFC5104?)


TeamCity Device Info :: Tests [Build 42](http://82.35.147.206:8111/viewLog.html?buildId=218&buildTypeId=DI_Test) outcome was **FAILURE**
Summary: Compilation error: :app:compileMockDebugAndroidTestJavaWithJavac (new) Build time: 00:01:10


@TheGrits Working on it right now, I'll have an unstyled version of it up within the next half hour.


:see_no_evil: if there is any sane way for me to test this locally I will be happy to do so


#5536-AirConditionerVariableRefrigerantFlow-with-ThermostatOffsetPriority-crashes-with-blank-Zone-Name-for-Master-Thermostat-Location (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-IntegrationCoverage-Debug: OK (1579 of 1579 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.svg) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.svg) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-70.85%25-green.svg)