You define the css-selector class but I don't see it being used on any HTML elements...

Here's how you would use a google font:
Create the HTML link (which you've done already.) When you are acquiring the embeddable text from google fonts you can customize it, which as far I understand, gives you values in the html that would then use in your css. the numbers correspond to the values for properties font-weight, font-style, and font-size. So if you import these styles:
`<link href="https://fonts.googleapis.com/css?family=Roboto:400,900,900i" rel="stylesheet">
<p>This will use the font/p>`
You'll still need to specify these values in the selector you're using to define the font on a particular element. So if we had text inside our `<p>` tag we'd do this:
```
p {
    font-family: font-family: 'Roboto', sans-serif;
    font-weight: 900;
    font-style: italic;
}

```


We now need to add throws IOException or try/catch to everywhere that this is used. Are you doing it, or should I?


I see your changes, but there is several leaks in the code prior:

Line 517:
memcpy(&(hashes[1]), &(hashes[2]), sizeof(curzip));

Line 521:
memcpy(&(hashes[1]), &(hashes[2]), sizeof(curzip));

Line 526:
memcpy(&(hashes[2]), &curzip, sizeof(curzip));

Line 529:
memcpy(&(hashes[2]), &(hashes[1]), sizeof(curzip));

Line 538:
memcpy(&(hashes[0]), &curzip, sizeof(curzip));

Line 542:
memcpy(&(hashes[2]), &(hashes[1]), sizeof(curzip));

Line 546:
memcpy(&(hashes[1]), &(hashes[0]), sizeof(curzip));

Line 550:
memcpy(&(hashes[2]), &(hashes[1]), sizeof(curzip));

In each one of these cases, if hash_data has been allocated, the pointer to the memory is destroyed, but we don't free these places.  I would suggest adding a MEM_FREE() call to free the allocated memory before doing the memcpy's.


287387043657aa6a1fabc0320fb4f5f843c502fe
alpharomeo13@287387043657aa6a1fabc0320fb4f5f843c502fe
alpharomeo13/github-flavored-markdown@287387043657aa6a1fabc0320fb4f5f843c502fe


I first pushed it on AICP Gerrit. Got merged. Lately, other devices started to get random reboots. After a "hide and seek". They found the guilty. That commit. Revert please.

Thanks,
Alex


|`line 5`|
|---|
Remove this import


cc @knedlsepp

I removed the patch since I don't think it is needed anymore, but we do have a failure on Darwin
http://hydra.nixos.org/build/44504961/nixlog/1/raw


Literally do you have nothing better to do


Remove this import


4f23fac31564914b6ec96e9bba167ffeb445410f
alpharomeo13@4f23fac31564914b6ec96e9bba167ffeb445410f
alpharomeo13/github-flavored-markdown@4f23fac31564914b6ec96e9bba167ffeb445410f


|`line 2`|
|---|
This file should be i18n'd


I've edited the README to make this cleared in 01683bc2b6054420fc90b0aac0e6bed3b140fe63.


6cce9b684fa872d8dad6edb99f666be41f771ab2
alpharomeo13@6cce9b684fa872d8dad6edb99f666be41f771ab2
alpharomeo13/github-flavored-markdown@6cce9b684fa872d8dad6edb99f666be41f771ab2


asd


yeah right, I just committed the fix, thanks!


This RDA includes 30 variables, as well as EDA and annotations. 12/4/16 1410


This file should be i18n'd


|`line 15`|
|---|
This file should be i18n'd


This adds the protocol whitelist to the default htconfig.php - which is fine. But I don't see any error handling for existing sites which don't have this in their config file. Perhaps check if the get_config() returned false and if so set to an empty array (?). Otherwise implode() will throw a warning.


@rm-hull I agree with this change but it also won't install on OSX (spidev is in setup.py) so tox is always failing.


![screen shot 2016-12-04 at 19 09 52](https://cloud.githubusercontent.com/assets/22932/20869638/4d06588e-ba55-11e6-8c0c-476c1adfb40d.png)

Is it supposed to be this way? I thought it should print exactly `IO.gets "What is your name?\n"` and not leave the last `"` hanging. I'm viewing from https://hexdocs.pm/elixir/IO.html#gets/2 and iex with Elixir -v 1.3.4. I guess it's not *breaking* things, maybe I didn't express correctly. :grin:


Won't it consume 100% CPU? That's my only concern. I have never used `retry` from `STM` 😞


I guess this function can throw something (because it works with network), so it would be good to catch it and retry even if error happens.


not sure if you want to just revert your change and use what cherrypy did (or wait till 8.1.3)
https://github.com/cherrypy/cherrypy/commit/ddad3873ec1caa94dfa2f6f18bfc700bea690c44


We should really split this up into multiple dataloaders


Why use an unordered list element here for the quotation text? Did you copy the code from the previous div? heh


I thought I'd gotten them all.


@ColCarroll Thanks for the details! I checked my win-64 anaconda install and noticed that "mkl-service" package has been already installed as a dependency to some of my packages of interest. PyMC3 is installed in the same environment; it must be other python package then which pulled it as a dependency.


When we look at the image Fred provided that shows what the site will look like, we see that the quote is limited to a certain width. Your code has the quote across most of the width. If you center your quote element (the current element is a `<ul>` but any most elements will center inside their container via `margin:auto;`, or you can use text-`align: center;` on the container)  you can set a pixel width to limit the size.


As far as I know: No, it won't consume 100% CPU. To my knowledge, STM is smart an will be notified once the retry could succeed - which is only when one of the participating TVar's changes.


It has been fixed here: https://github.com/elixir-lang/elixir/commit/50a8483532ac500063ce96e903d6390abf720a8e (it is fixed in master and upcoming v1.4).


A task that has a `dueDate` of yesterday or before should not automatically be "closed"


I ll try again.
Thanks


Alright, it's good, I expected it to work this way, but wasn't 100% sure.


You mean `sendToNeighborsSafe`? Okay, I can do that... is something similar done elsewhere? Do I have to catch a specific error type? If it's done elsewhere, I can look how it was done there.


thank you @josevalim and thank you @rkma for the bug report


Та камон, бинарь собрал и не паришься


Та компиляция говно!


There's no "issue" so I'll comment here...

@dimok789 Is this possible to dump the vwii slc like ft2sd do?


+beautify


Well, something similar is done in `Pos.Slotting.onNewSlot` and in `Control.TimeWarp.Timed.Misc.repeatForever`. But as you can see, there we catch `SomeException` which is usually not the best solution (and not the best solution in this particular case I suppose) 😞
Ideally it should be clear from `time-warp` which exception one should catch when he uses `send*` functions from `Control.TimeWarp.Rpc.MonadDialog` (which are used by `sendToNeighborsSafe`), but now it's not clear at least for me, so I think you can disregard it for a while and I will create an issue about it.


Since our header is inside the container, and since the container contains everything and we've set the container to a certain with (980px) we don't need to set the width of the divs inside the container to 980px as well since that size is going to be within 980px anyway. If we want to specify the size as something much smaller than the container that's fine, but typically you'd use either a percentage to ensure the header takes up the whole container space, or pixels too of course.


This copyright section looks excellent.


@Borlea Build failed to compile. :( http://jenkins.codingforcookies.com/job/EchoPet/job/master/35/console


Teach me, O wise one


@kring - out of curiosity, what was your thinking with this version update? It looks like the previous commit was to version 2.6.1, so that now 2.6.2 is identical to 2.6.1?


I refereshed and synced, but Entity and several tests are complaining


You did a good job on this assignment, and there's a few small things that I mention but they're not make-or-break things. I'd recommend sticking a bit more to the design sheet with the specifications and also spending some more time making your site look more like the sample site image too, but we'll get there.


b75730936c429671df7f9ae4d7db3ec3618fc3da

Awesome Thanks


I didn't notice the added sigil on master, sorry. Thanks, @josevalim and @eksperimental !


Wanna raise a PR for this change? Very useful for quickly grabbing config.


Do you help with Roll20 html and css issues?


I did not check the tests, and I confirm the presence of the error in Entity. I must never have hit End Turn in my crash testing. Go ahead and fix things since I can't reliably fix test classes.


Okay, so when you say I should "disregard" it, do you mean I should not catch anything? Or I should catch everything (via `catchAll`)?
If the latter, I already changed my code accordingly and can push it.


In reality, libamcodec is a system lib, just not part of the normal android system set  :) But libamcodec, seriously what does it need libdl for ? AML devs continue to amaze in new and interesting ways.

dlopening/closing associated system libs makes sense IF the system libs is not already loaded and is needed by the loaded lib. There is a reason Cory added that code, because the loader in Android would not load the libs linked to a loading lib. Not sure if google ever fixed that.


Added sections that I will be filling out.


First commit


`catchAll` is fine for now.


Sorry, should have put it in the change log.  No code change, but because I published 2.6.1 from a Windows system, the permissions on the run_server script were wrong and it wouldn't start.  2.6.2 fixes that.


update


So trendy :)


thanks!


I'll update the changelog now for posterity.


The original current implementation of getting gt_het and gt_hom fields is such:
- before saving varian to doc, we first set `ac_tot, gh_het, gt_home` to 0 [here](https://github.com/phenotips/variant-store/blob/084a143ea848d88ef472d84b2e894766fa68fe6d/variant-store/src/main/java/org/phenotips/variantstore/db/solr/SolrVariantUtils.java#L200-L202),
- then updating only `ac_tot` [here](https://github.com/phenotips/variant-store/blob/084a143ea848d88ef472d84b2e894766fa68fe6d/variant-store/src/main/java/org/phenotips/variantstore/db/solr/SolrVariantUtils.java#L228-L233)

So `gh_het, gt_home` always stay 0.


When we look at the image used to show the site we see that the list items have their own line. How could you modify the display value of the list items in this list such that each item occupied its own line?


Yeah, your a king, I merge your change...


@thugmunch I have the same question as @DarthPacer


So how close to release is the project now?


ry


If we create another selection and specify hover we can apply style for these elements when the mouse hovers over them.
```
a:hover{
color: red;
}
<a>link hover</a>
```
a:hover{
color: red;
}
link hover


close the `distributions` here


instead of here


@bdenlinger I don't really care for collections that contain just Objects, but it does not like it can be avoided in this case.  Are you aware of any alternative approaches that we might take?


+ changed my .vimrc to fix indentation^^


Lol whoops, I really thought I changed this, thanks


I would not put the `createExe` in here.
To create the executables you want, either disable the `createExe` task or remove the `createOhneSpeichernExe` task and add `outfile="MediathekView__ohne_Speicher__Start.exe"` into the launch4j plugin configuration.

This would then close TheBoegl/gradle-launch4j/issues/36


After the leveling sensor worked, it can be useful and pleasant to view the average value of the total level.
Can someone change the bCNC program to get that I propose?


Drop Caps! There's a few different ways to have the first letter of a body of text have fancier style, and this way is the easiest. This means that on all p tags the first child (the first character/letter) will get a different style.

p:first-child:first-letter {
 float: left;
 color: #903;
 font-size: 75px;
 line-height: 60px;
 padding-top: 4px;
 padding-right: 8px;
 padding-left: 3px;
 font-family: Georgia;
 }


[UPDATED user manual (1).docx](https://github.com/ggsquare/Comp-Sci-Group-Project/files/629899/UPDATED.user.manual.1.docx)


This one is updated with the diagonal movement added


not sure if less than, greater then, predecrement, ... (<, >, ==, ... ++, --) work fine, but they should


Ok, agree


Confirm, `retry` will just `wait` till any variable changes


**I made this commit** through Koby's account


@gromakovsky I mean looks like we need to calculate secret even if we don't participate in MPC? I mean, we still receive blocks, will they get handled properly?


Yes you are correct. This is a very basic project and I apologize for doing this. If you want to see some of my more promising projects, please look at ZetaPhase/BetaGo. These are real projects where I actually put hard work into. Check that out.


@ilaripih  Yes, there was logic. Currently we are going the straight way. This code section checks whether en passant is possible if the ep field is set and which target pawn to capture.

Berolina is peculiar: it is possible to have an ep field set in the FEN position and have two enemy pawns that are candidates for a capture. Only one is a legal target and the other has moved before. From a normal FEN alone you cannot decide which pawn to capture:
`rnbqkbnr/pp1p1ppp/8/2pPp3/8/8/PPPP1PPP/RNBQKBNR w KQkq d6 0 3`
c5 or e5?

If you have the SAN no problem:
`1. e2c4 e7c5  2. c4d5 c7e5 *`

So it is e5.

The strange line
`epTgt = epTgt ? sq : sq;`
was a reminder. The compiler will optimize this out.
epTgt will be set already if there is ambiguity. One could have issued a warning
`epTgt = epTgt? doSomething(sq): sq;`

 So I just put `sq :sq` for a slim profile. As this was my first variant contribution I did not make a fuss. If the project maintainers asked, then I would answer ;-) .


Sorry, but we do not. There's just enough things with roll20 that we don't
quite like we are trying our hand at building our own version to run on a
private server. We just suck at names so we have a similar one at the
moment.

On Sun, Dec 4, 2016 at 5:38 PM, KenRiehle <notifications@github.com> wrote:

> Do you help with Roll20 html and css issues?
>
> —
> You are receiving this because you are subscribed to this thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/clineja/roll2000/commit/5b313145b1b8b23fde267ad53f250fc8134af84d#commitcomment-20065472>,
> or mute the thread
> <https://github.com/notifications/unsubscribe-auth/AGft_ndxlZeglE-bhSFtsi5WEx9G43j3ks5rE0DUgaJpZM4LDuUQ>
> .
>

--
Daniel Kellett

Miami University 2017
--M.S. in Electrical and Computational Engineering
Miami University 2016
--B.S. in Electrical Engineering
--Minor in Physics
IEEE Student Member


"I honestly just feel like deleting this emotional battleground. Everyday I'm getting some piece of crap that Jordan said, then everyone reacts to it."

and I said lets remove him the because he says crap that pisses off everyone


Yeah, it was purely so I can hack-on-a-mac ... also the pygame emulator works on osx but it seems a bit buggy - if you look at the invaders example, you have to push everything twice for it to display properly, whereas running it on an ubuntu desktop it doesn't. Spent ages thinking it was something in the emulator code that was wrong :-s

I tend to run it on the desktop with:

```
PYTHONPATH=. python examples/carousel.py -d pygame
```


Thx,will remove duplicated "the ratchet Id"


This webpage looks fantastic, Savannah, and I feel bad because I think you just left out a few of things listed in the requirements (the drop caps and the hover effects) but all in all, I think you did a great job.


Mise à jour de la BDD


So you mean we should get rid of "our" and "their"?


We can do this with our Asset server instead of outsourcing to another venue.


done:
https://hg.mozilla.org/releases/l10n/mozilla-aurora/pl/rev/8eadab019a30
https://hg.mozilla.org/releases/l10n/mozilla-beta/pl/rev/32c9417ff18a


@mrose17 could you maybe explain why the _internal field needs to be cleared on ledgerInfo if LedgerClient.recoverWallet fails? (esp if recoverWallet doesn't change state.)


My favorite class is [the spy.](http://steamcommunity-a.akamaihd.net/economy/image/U8721VM9p9C2v1o6cKJ4qEnGqnE7IoTQgZI-VTdwyTBeimAcIoxXpgK8bPeslY9pPJIvB5IWW2-452kaM8heLSRgleGHorVWxuhgOal40eeqDV136-FDB2PiThPWgzLGfOauwVcxMMAncRmrxM4b7cAXB9ajdrt8xw)


science pack
![science pack](https://cloud.githubusercontent.com/assets/21255399/20870066/ad91c15e-ba35-11e6-9dba-e0e97fb462df.png)


ce commit contient egalement la mise à jour des valeurs de rugosité et le bouton d'affichage des zones PPR ds l'interface Participatif


Forgot to add the file extension (.css) on the normalize file. Be sure to check out the console log in the browser to catch things like this. (I glanced through the code and thought: this looks great! but then saw the error in the console. It's hard to spot errors manually; the console is super handy for that.)


Tutaj chodziło mi o "linia vs wiersz", ale to też dobre commity do backportowania. :)


@ericmj ugh, sorry for the mix up (see commit message). Fortunately, the recent regression never went out to prod


A lot of these lines are just formatting changes (should be final this time...).


Why Semantic Forms became a Page Forms ?


After the leveling sensor worked, it can be useful and pleasant to view the average value of the total level.
Can someone change the bCNC program to get that I propose?


Tampilan loggin dan home


Mensagem de commit equivoca, mudanças: adicionado teste de CDR, implementação de listagem de resultados


[R/composite.R:2:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L2) *style:* **Use two spaces to indent, never tabs.**
```r
	sum_mat <- mat_from_ret_obj(retina_list[[1]], rotation=0, ...)
^
```
[R/composite.R:2:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L2) *style:* **Commented code should be removed.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:2:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L2) *style:* **Use two spaces to indent, never tabs.**
```r
  									spin_spatial_res=128,
  ^~~~~~~~~
```
[R/composite.R:3:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L3) *style:* **Use two spaces to indent, never tabs.**
```r
	n <- length(retina_list)
^
```
[R/composite.R:3:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L3) *style:* **Commented code should be removed.**
```r
##' @param spin_spatial_res Resolution passed to the spin-optimization.
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:3:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L3) *style:* **Use two spaces to indent, never tabs.**
```r
  									plot_spatial_res=512,
  ^~~~~~~~~
```
[R/composite.R:4:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L4) *style:* **Use two spaces to indent, never tabs.**
```r
	for (i in 2:n) {
^
```
[R/composite.R:4:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L4) *style:* **Commented code should be removed.**
```r
##' @param theta_interval number of degrees to traverse in spin-optimization
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:4:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L4) *style:* **Use two spaces to indent, never tabs.**
```r
  									theta_interval=10,
  ^~~~~~~~~
```
[R/composite.R:5:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L5) *style:* **Use two spaces to indent, never tabs.**
```r
		sum_mat <- sum_mat + mat_from_ret_obj(retina_list[[i]],
^~
```
[R/composite.R:5:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L5) *style:* **Use two spaces to indent, never tabs.**
```r
  									plot=FALSE,
  ^~~~~~~~~
```
[R/composite.R:6:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L6) *style:* **Use two spaces to indent, never tabs.**
```r
											  rotation_indices[i],
^~~~~~~~~~~
```
[R/composite.R:7:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L7) *style:* **Use two spaces to indent, never tabs.**
```r
											  ...)
^~~~~~~~~~~
```
[R/composite.R:8:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L8) *style:* **Use two spaces to indent, never tabs.**
```r
	}
^
```
[R/composite.R:9:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L9) *style:* **Use two spaces to indent, never tabs.**
```r
	rotation_degree_list <- compute_rotation_matrix( retina_list,
^
```
[R/composite.R:9:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L9) *style:* **Use two spaces to indent, never tabs.**
```r
	return(sum_mat)
^
```
[R/composite.R:9:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L9) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian_cohn14@@pitzer.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:10:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L10) *style:* **Use two spaces to indent, never tabs.**
```r
												spatial_res=spin_spatial_res,
^~~~~~~~~~~~
```
[R/composite.R:11:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L11) *style:* **Use two spaces to indent, never tabs.**
```r
												theta_interval=theta_interval, ...)[1,]
^~~~~~~~~~~~
```
[R/composite.R:14:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L14) *style:* **Use two spaces to indent, never tabs.**
```r
	n <- length(retina_list)
^
```
[R/composite.R:15:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L15) *style:* **Use two spaces to indent, never tabs.**
```r
	sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res=plot_spatial_res)
^
```
[R/composite.R:16:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L16) *style:* **Use two spaces to indent, never tabs.**
```r
	composite_mat <- sum/n #get the average
^
```
[R/composite.R:17:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L17) *style:* **Use two spaces to indent, never tabs.**
```r
	if (plot){
^
```
[R/composite.R:17:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L17) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/composite.R:18:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L18) *style:* **Use two spaces to indent, never tabs.**
```r
		message('Plotting')
^~
```
[R/composite.R:18:32:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L18) *style:* **Put spaces around all infix operators.**
```r
if (class(rotation_degree_list)!="matrix") {
                              ~^~~
```
[R/composite.R:19:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L19) *style:* **Use two spaces to indent, never tabs.**
```r
		dev.new()
^~
```
[R/composite.R:19:30:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L19) *style:* **Put spaces around all infix operators.**
```r
	rotation_degree_list <- compute_rotation_matrix( retina_list,
                            ~^~~
```
[R/composite.R:20:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L20) *style:* **Use two spaces to indent, never tabs.**
```r
		plot_from_MAT(  MATRIX=composite_mat,
^~
```
[R/composite.R:21:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L21) *style:* **Use two spaces to indent, never tabs.**
```r
						extrapolate=TRUE,
^~~~~~
```
[R/composite.R:22:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L22) *style:* **Use two spaces to indent, never tabs.**
```r
						spatial_res = plot_spatial_res,
^~~~~~
```
[R/composite.R:22:9:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L22) *style:* **Only use double-quotes.**
```r
message('No coordinates submitted, spin optimization chosen')
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:23:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L23) *style:* **Use two spaces to indent, never tabs.**
```r
						col_levels=50,
^~~~~~
```
[R/composite.R:24:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L24) *style:* **Use two spaces to indent, never tabs.**
```r
						contour_levels=20,
^~~~~~
```
[R/composite.R:24:11:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L24) *style:* **Put spaces around all infix operators.**
```r
	n <- length(retina_list)
         ~^~~
```
[R/composite.R:25:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L25) *style:* **Use two spaces to indent, never tabs.**
```r
						contour_breaks_source =  c(min(composite_mat),max(composite_mat)),
^~~~~~
```
[R/composite.R:25:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L25) *style:* **lines should not be more than 80 characters.**
```r
	sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res=plot_spatial_res)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:25:9:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L25) *warning:* **no visible global function definition for ‘map_vec_sum’**
```r
	sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res=plot_spatial_res)
        ^~~~~~~~~~~
```
[R/composite.R:25:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L25) *style:* **Put spaces around all infix operators.**
```r
	sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res=plot_spatial_res)
           ~^~~
```
[R/composite.R:25:74:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L25) *style:* **Put spaces around all infix operators.**
```r
	sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res=plot_spatial_res)
                                                                        ~^~
```
[R/composite.R:26:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L26) *style:* **Use two spaces to indent, never tabs.**
```r
						col_breaks_source     =  c(min(composite_mat),max(composite_mat)),
^~~~~~
```
[R/composite.R:26:23:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L26) *style:* **Put spaces around all infix operators.**
```r
	composite_mat <- sum/n #get the average
                     ~^~~
```
[R/composite.R:26:29:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L26) *style:* **Put spaces around all infix operators.**
```r
	composite_mat <- sum/n #get the average
                           ~^~
```
[R/composite.R:27:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L27) *style:* **Use two spaces to indent, never tabs.**
```r
						z1 = Pmol_753$azimuthal_data.datapoints[[1]]$z,
^~~~~~
```
[R/composite.R:27:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L27) *style:* **Place a space before left parenthesis, except in a function call.**
```r
	if (plot){
           ^
```
[R/composite.R:28:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L28) *style:* **Use two spaces to indent, never tabs.**
```r
						z2 = Pmol_752$azimuthal_data.datapoints[[1]]$z)
^~~~~~
```
[R/composite.R:28:25:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L28) *style:* **Only use double-quotes.**
```r
		message('Plotting')
                        ^~~~~~~~~~
```
[R/composite.R:29:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L29) *style:* **Use two spaces to indent, never tabs.**
```r
	} #end plotif
^
```
[R/composite.R:30:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L30) *style:* **Use two spaces to indent, never tabs.**
```r
	return (composite_mat)
^
```
[R/composite.R:30:39:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L30) *style:* **Put spaces around all infix operators.**
```r
		plot_from_MAT(  MATRIX=composite_mat,
                                     ~^~
```
[R/composite.R:31:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L31) *style:* **Trailing whitespace is superfluous.**
```r
						extrapolate=TRUE,
                       ^
```
[R/composite.R:35:71:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L35) *style:* **Put spaces around all infix operators.**
```r
						contour_breaks_source =  c(min(composite_mat),max(composite_mat)),
                                                                     ~^~
```
[R/composite.R:36:71:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L36) *style:* **Put spaces around all infix operators.**
```r
						col_breaks_source     =  c(min(composite_mat),max(composite_mat)),
                                                                     ~^~
```
[R/composite.R:37:52:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L37) *style:* **Put spaces around all infix operators.**
```r
						z1 = Pmol_753$azimuthal_data.datapoints[[1]]$z,
                                                  ~^~
```
[R/composite.R:38:52:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L38) *style:* **Put spaces around all infix operators.**
```r
						z2 = Pmol_752$azimuthal_data.datapoints[[1]]$z)
                                                  ~^~
```
[R/composite.R:44:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L44) *style:* **Commented code should be removed.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:48:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L48) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian_cohn14@@pitzer.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:50:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L50) *warning:* **no visible global function definition for ‘mat_from_ret_obj’**
```r
	sum_mat <- mat_from_ret_obj(retina_list[[1]], rotation=0, ...)
            ^~~~~~~~~~~~~~~~
```
[R/composite.R:50:17:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L50) *style:* **Put spaces around all infix operators.**
```r
	sum_mat <- mat_from_ret_obj(retina_list[[1]], rotation=0, ...)
               ~^~~
```
[R/composite.R:50:63:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L50) *style:* **Put spaces around all infix operators.**
```r
	sum_mat <- mat_from_ret_obj(retina_list[[1]], rotation=0, ...)
                                                             ~^~
```
[R/composite.R:51:11:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L51) *style:* **Put spaces around all infix operators.**
```r
	n <- length(retina_list)
         ~^~~
```
[R/composite.R:52:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L52) *style:* **Place a space before left parenthesis, except in a function call.**
```r
	for (i in 2:n) {
            ^
```
[R/composite.R:53:25:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L53) *style:* **Put spaces around all infix operators.**
```r
		sum_mat <- sum_mat + mat_from_ret_obj(retina_list[[i]],
                       ~^~~
```
[R/composite.R:53:36:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/composite.R#L53) *style:* **Put spaces around all infix operators.**
```r
		sum_mat <- sum_mat + mat_from_ret_obj(retina_list[[i]],
                                  ~^~
```
[R/matrix_retobj.R:2:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L2) *style:* **Use two spaces to indent, never tabs.**
```r
	x2 <- retina_object$azimuthal_data.datapoints[[1]]$x
^
```
[R/matrix_retobj.R:3:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L3) *style:* **Use two spaces to indent, never tabs.**
```r
	y2 <- retina_object$azimuthal_data.datapoints[[1]]$y
^
```
[R/matrix_retobj.R:4:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L4) *style:* **Use two spaces to indent, never tabs.**
```r
	z2 <- retina_object$azimuthal_data.datapoints[[1]]$z
^
```
[R/matrix_retobj.R:6:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L6) *style:* **Use two spaces to indent, never tabs.**
```r
	# Rotation
^
```
[R/matrix_retobj.R:7:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L7) *style:* **Use two spaces to indent, never tabs.**
```r
	ori <- c(-90, 90, rotation)
^
```
[R/matrix_retobj.R:8:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L8) *style:* **Use two spaces to indent, never tabs.**
```r
	az <- mapproject(x=retina_object$trimmed_data[,2], retina_object$trimmed_data[,1],
^
```
[R/matrix_retobj.R:9:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L9) *style:* **Use two spaces to indent, never tabs.**
```r
					   projection="azequidistant", orientation=ori)
^~~~~
```
[R/matrix_retobj.R:10:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L10) *style:* **Use two spaces to indent, never tabs.**
```r
	x2 <- az$x #overwirte old value
^
```
[R/matrix_retobj.R:10:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L10) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian_cohn14@@pitzer.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:11:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L11) *style:* **Use two spaces to indent, never tabs.**
```r
	ifelse(reflect,x2<-(-1.0*x2), message(''))
^
```
[R/matrix_retobj.R:12:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L12) *style:* **Use two spaces to indent, never tabs.**
```r
	y2 <- az$y #overwrite old value
^
```
[R/matrix_retobj.R:12:17:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L12) *style:* **Put spaces around all infix operators.**
```r
mat_from_ret_obj<- function(retina_object, rotation=0, n=1, reflect=TRUE, ...){
               ~^
```
[R/matrix_retobj.R:13:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L13) *style:* **Put spaces around all infix operators.**
```r
	x2 <- retina_object$azimuthal_data.datapoints[[1]]$x
          ~^~~
```
[R/matrix_retobj.R:14:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L14) *style:* **Use two spaces to indent, never tabs.**
```r
	# Fitting models
^
```
[R/matrix_retobj.R:14:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L14) *style:* **Put spaces around all infix operators.**
```r
	y2 <- retina_object$azimuthal_data.datapoints[[1]]$y
          ~^~~
```
[R/matrix_retobj.R:15:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L15) *style:* **Use two spaces to indent, never tabs.**
```r
	map2fit <- fit_plot_azimuthal(x2,y2,z2,
^
```
[R/matrix_retobj.R:15:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L15) *style:* **Put spaces around all infix operators.**
```r
	z2 <- retina_object$azimuthal_data.datapoints[[1]]$z
          ~^~~
```
[R/matrix_retobj.R:16:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L16) *style:* **Use two spaces to indent, never tabs.**
```r
									plot_suppress=TRUE, extrapolate=TRUE,
^~~~~~~~~
```
[R/matrix_retobj.R:17:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L17) *style:* **Use two spaces to indent, never tabs.**
```r
									outer.radius=pi/2.0,
^~~~~~~~~
```
[R/matrix_retobj.R:18:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L18) *style:* **Use two spaces to indent, never tabs.**
```r
									falciform_coords = retina_object$azimuthal_data.falciform[[1]],...)
^~~~~~~~~
```
[R/matrix_retobj.R:18:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L18) *style:* **Put spaces around all infix operators.**
```r
	ori <- c(-90, 90, rotation)
           ~^
```
[R/matrix_retobj.R:19:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **Use two spaces to indent, never tabs.**
```r
	MAT <- map2fit[[2]]$z
^
```
[R/matrix_retobj.R:19:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **lines should not be more than 80 characters.**
```r
	az <- mapproject(x=retina_object$trimmed_data[,2], retina_object$trimmed_data[,1],
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:19:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **Put spaces around all infix operators.**
```r
	az <- mapproject(x=retina_object$trimmed_data[,2], retina_object$trimmed_data[,1],
          ~^~~
```
[R/matrix_retobj.R:19:23:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **Use two spaces to indent, never tabs.**
```r
	MAT <- map2fit[[2]]$z
                      ^
```
[R/matrix_retobj.R:19:27:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **Put spaces around all infix operators.**
```r
	az <- mapproject(x=retina_object$trimmed_data[,2], retina_object$trimmed_data[,1],
                         ~^~
```
[R/matrix_retobj.R:19:84:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L19) *style:* **Trailing whitespace is superfluous.**
```r
	az <- mapproject(x=retina_object$trimmed_data[,2], retina_object$trimmed_data[,1],
                                                                                ^
```
[R/matrix_retobj.R:20:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L20) *style:* **Use two spaces to indent, never tabs.**
```r
	#reflect the eye
^
```
[R/matrix_retobj.R:21:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L21) *style:* **Use two spaces to indent, never tabs.**
```r
	return(MAT/n)
^
```
[R/matrix_retobj.R:21:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L21) *style:* **Put spaces around all infix operators.**
```r
	x2 <- az$x #overwirte old value
          ~^~~
```
[R/matrix_retobj.R:22:26:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L22) *style:* **Put spaces around all infix operators.**
```r
	ifelse(reflect,x2<-(-1.0*x2), message(''))
                        ~^~~
```
[R/matrix_retobj.R:22:28:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L22) *style:* **Place a space before left parenthesis, except in a function call.**
```r
	ifelse(reflect,x2<-(-1.0*x2), message(''))
                           ^
```
[R/matrix_retobj.R:22:33:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L22) *style:* **Put spaces around all infix operators.**
```r
	ifelse(reflect,x2<-(-1.0*x2), message(''))
                               ~^~
```
[R/matrix_retobj.R:22:47:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L22) *style:* **Only use double-quotes.**
```r
	ifelse(reflect,x2<-(-1.0*x2), message(''))
                                              ^~
```
[R/matrix_retobj.R:23:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L23) *style:* **Put spaces around all infix operators.**
```r
	y2 <- az$y #overwrite old value
          ~^~~
```
[R/matrix_retobj.R:26:17:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L26) *style:* **Put spaces around all infix operators.**
```r
	map2fit <- fit_plot_azimuthal(x2,y2,z2,
               ~^~~
```
[R/matrix_retobj.R:30:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L30) *style:* **Put spaces around all infix operators.**
```r
	MAT <- map2fit[[2]]$z
           ~^~~
```
[R/matrix_retobj.R:30:23:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/matrix_retobj.R#L30) *style:* **Trailing whitespace is superfluous.**
```r
	MAT <- map2fit[[2]]$z
                      ^
```
[R/polar_plot_from_mat.R:4:9:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L4) *style:* **Variable and function names should be all lowercase.**
```r
require(RColorBrewer)
        ^~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:22:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L22) *style:* **Commented code should be removed.**
```r
##' @param single_point_overlay Overlay "key" data point with square (0 = No, Other = number of pt)
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:32:14:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L32) *style:* **Put spaces around all infix operators.**
```r
plot_from_MAT<- function(
            ~^
```
[R/polar_plot_from_mat.R:33:4:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L33) *style:* **Commented code should be removed.**
```r
  ### Plotting data (in cartesian) - will be converted to polar space.
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:34:18:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L34) *style:* **Trailing whitespace is superfluous.**
```r
  z1, z2, MATRIX,
                 ^
```
[R/polar_plot_from_mat.R:36:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L36) *style:* **Use two spaces to indent, never tabs.**
```r
	minitics <- seq(-outer.radius, outer.radius, length.out = spatial_res)
^
```
[R/polar_plot_from_mat.R:37:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L37) *style:* **Use two spaces to indent, never tabs.**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
^
```
[R/polar_plot_from_mat.R:38:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L38) *style:* **Use two spaces to indent, never tabs.**
```r
	Mat = MATRIX
^
```
[R/polar_plot_from_mat.R:42:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L42) *style:* **lines should not be more than 80 characters.**
```r
  col_breaks_source = 2, # Where to calculate the color breaks from (1=data,2=surface)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:44:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L44) *style:* **lines should not be more than 80 characters.**
```r
  col_levels = 10,    # Number of color levels to use - must match length(col) if
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:44:82:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L44) *style:* **Trailing whitespace is superfluous.**
```r
  col_levels = 10,    # Number of color levels to use - must match length(col) if
                                                                                ^
```
[R/polar_plot_from_mat.R:46:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L46) *style:* **lines should not be more than 80 characters.**
```r
  col = rev(colorRampPalette(brewer.pal(11,"PuOr"))(col_levels)),  # Colors to plot
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:46:44:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L46) *style:* **Commas should always have a space after.**
```r
  col = rev(colorRampPalette(brewer.pal(11,"PuOr"))(col_levels)),  # Colors to plot
                                           ^
```
[R/polar_plot_from_mat.R:49:30:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L49) *style:* **Put spaces around all infix operators.**
```r
  contour_levels = col_levels+1,
                            ~^~
```
[R/polar_plot_from_mat.R:51:20:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L51) *style:* **Put spaces around all infix operators.**
```r
  outer.radius = pi/2,
                  ~^~
```
[R/polar_plot_from_mat.R:51:23:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L51) *style:* **Trailing whitespace is superfluous.**
```r
  outer.radius = pi/2,
                      ^~
```
[R/polar_plot_from_mat.R:52:28:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L52) *style:* **Commas should always have a space after.**
```r
  circle.rads = pretty(c(0,outer.radius)), #Radius lines
                           ^
```
[R/polar_plot_from_mat.R:54:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L54) *style:* **Use two spaces to indent, never tabs.**
```r
	contour_breaks = seq(min(z,na.rm=TRUE),max(z,na.rm=TRUE),
^
```
[R/polar_plot_from_mat.R:54:64:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L54) *style:* **Trailing whitespace is superfluous.**
```r
  single_point_overlay=0, #Overlay "key" data point with square
                                                               ^
```
[R/polar_plot_from_mat.R:55:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L55) *style:* **Use two spaces to indent, never tabs.**
```r
						 by=(max(z,na.rm=TRUE)-min(z,na.rm=TRUE))/(contour_levels-1))
^~~~~~
```
[R/polar_plot_from_mat.R:57:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L57) *style:* **lines should not be more than 80 characters.**
```r
  interp.type = 1, #1 = Thin plate spline , null if you are inputting your own predicted surface
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:58:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L58) *style:* **Use two spaces to indent, never tabs.**
```r
	contour_breaks = seq(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE),
^
```
[R/polar_plot_from_mat.R:58:28:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L58) *style:* **Commas should always have a space after.**
```r
  lambda=0.001, xyrelief=1,...) {
                           ^
```
[R/polar_plot_from_mat.R:58:33:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L58) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  lambda=0.001, xyrelief=1,...) {
                                ^
```
[R/polar_plot_from_mat.R:58:34:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L58) *style:* **Trailing whitespace is superfluous.**
```r
  lambda=0.001, xyrelief=1,...) {
                                 ^
```
[R/polar_plot_from_mat.R:59:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L59) *style:* **Use two spaces to indent, never tabs.**
```r
						 by=(max(Mat,na.rm=TRUE)-min(Mat,na.rm=TRUE))/(contour_levels-1))
^~~~~~
```
[R/polar_plot_from_mat.R:59:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L59) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:61:33:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L61) *style:* **Commas should always have a space after.**
```r
  spatial_res <- length(MATRIX[,1])
                                ^
```
[R/polar_plot_from_mat.R:62:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L62) *style:* **Use two spaces to indent, never tabs.**
```r
	print(paste0("Manual contour range set from ", contour_breaks_source[1], " to ", contour_breaks_source[2]))
^
```
[R/polar_plot_from_mat.R:63:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L63) *style:* **Use two spaces to indent, never tabs.**
```r
	contour_breaks = pretty(contour_breaks_source,n=contour_levels)
^
```
[R/polar_plot_from_mat.R:63:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L63) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:64:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L64) *style:* **Use two spaces to indent, never tabs.**
```r
	contour_breaks = seq(contour_breaks_source[1],contour_breaks_source[2],
^
```
[R/polar_plot_from_mat.R:65:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L65) *style:* **Use two spaces to indent, never tabs.**
```r
						 by=(contour_breaks_source[2]-contour_breaks_source[1])/(contour_levels-1))
^~~~~~
```
[R/polar_plot_from_mat.R:66:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L66) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:67:18:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L67) *style:* **Put spaces around all infix operators.**
```r
	minitics <- seq(-outer.radius, outer.radius, length.out = spatial_res)
                ~^~~
```
[R/polar_plot_from_mat.R:67:65:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L67) *style:* **Put spaces around all infix operators.**
```r
	minitics <- seq(-outer.radius, outer.radius, length.out = spatial_res)
                                                               ~^~
```
[R/polar_plot_from_mat.R:68:2:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L68) *warning:* **local variable ‘grid.list’ assigned but may not be used**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
 ^~~~~~~~~
```
[R/polar_plot_from_mat.R:68:19:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L68) *style:* **Use <-, not =, for assignment.**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
                  ^
```
[R/polar_plot_from_mat.R:68:19:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L68) *style:* **Put spaces around all infix operators.**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
                 ~^~
```
[R/polar_plot_from_mat.R:68:27:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L68) *style:* **Put spaces around all infix operators.**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
                         ~^~
```
[R/polar_plot_from_mat.R:68:38:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L68) *style:* **Put spaces around all infix operators.**
```r
	grid.list = list(x=minitics,y=minitics) #choose locations to predict at
                                    ~^~
```
[R/polar_plot_from_mat.R:69:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L69) *style:* **Use <-, not =, for assignment.**
```r
	Mat = MATRIX
            ^
```
[R/polar_plot_from_mat.R:69:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L69) *style:* **Put spaces around all infix operators.**
```r
	Mat = MATRIX
           ~^~
```
[R/polar_plot_from_mat.R:71:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L71) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  else {stop("interp.type value not valid")}
       ^
```
[R/polar_plot_from_mat.R:71:44:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L71) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  else {stop("interp.type value not valid")}
                                           ^
```
[R/polar_plot_from_mat.R:78:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L78) *style:* **lines should not be more than 80 characters.**
```r
#   ###;; ________________________________________________________________________
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:80:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L80) *style:* **Variable and function names should be all lowercase.**
```r
  markNA <- matrix(minitics, ncol = spatial_res, nrow = spatial_res)
  ^~~~~~
```
[R/polar_plot_from_mat.R:80:69:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L80) *style:* **Trailing whitespace is superfluous.**
```r
  markNA <- matrix(minitics, ncol = spatial_res, nrow = spatial_res)
                                                                    ^
```
[R/polar_plot_from_mat.R:81:13:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L81) *style:* **Variable and function names should be all lowercase.**
```r
  Mat[!sqrt(markNA ^ 2 + t(markNA) ^ 2) < outer.radius] <- NA
            ^~~~~~
```
[R/polar_plot_from_mat.R:81:28:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L81) *style:* **Variable and function names should be all lowercase.**
```r
  Mat[!sqrt(markNA ^ 2 + t(markNA) ^ 2) < outer.radius] <- NA
                           ^~~~~~
```
[R/polar_plot_from_mat.R:81:62:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L81) *style:* **Trailing whitespace is superfluous.**
```r
  Mat[!sqrt(markNA ^ 2 + t(markNA) ^ 2) < outer.radius] <- NA
                                                             ^
```
[R/polar_plot_from_mat.R:82:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L82) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:84:7:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L84) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if ((length(contour_breaks_source == 1)) & (contour_breaks_source[1] == 1)){
      ^
```
[R/polar_plot_from_mat.R:85:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L85) *style:* **Use <-, not =, for assignment.**
```r
	contour_breaks = seq(min(z,na.rm=TRUE),max(z,na.rm=TRUE),
                       ^
```
[R/polar_plot_from_mat.R:85:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L85) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(z,na.rm=TRUE),max(z,na.rm=TRUE),
                      ~^~
```
[R/polar_plot_from_mat.R:85:41:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L85) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(z,na.rm=TRUE),max(z,na.rm=TRUE),
                                       ~^~
```
[R/polar_plot_from_mat.R:85:59:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L85) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(z,na.rm=TRUE),max(z,na.rm=TRUE),
                                                         ~^~
```
[R/polar_plot_from_mat.R:86:52:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L86) *style:* **Put spaces around all infix operators.**
```r
						 by=(max(z,na.rm=TRUE)-min(z,na.rm=TRUE))/(contour_levels-1))
                                                  ~^~
```
[R/polar_plot_from_mat.R:86:53:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L86) *style:* **Place a space before left parenthesis, except in a function call.**
```r
						 by=(max(z,na.rm=TRUE)-min(z,na.rm=TRUE))/(contour_levels-1))
                                                    ^
```
[R/polar_plot_from_mat.R:86:65:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L86) *style:* **Put spaces around all infix operators.**
```r
						 by=(max(z,na.rm=TRUE)-min(z,na.rm=TRUE))/(contour_levels-1))
                                                               ~^~
```
[R/polar_plot_from_mat.R:87:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L87) *style:* **Use two spaces to indent, never tabs.**
```r
	CL <- contourLines(x = minitics, y = minitics, Mat, levels = contour_breaks)
^
```
[R/polar_plot_from_mat.R:88:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L88) *style:* **Use two spaces to indent, never tabs.**
```r
	A <- lapply(CL, function(xy){
^
```
[R/polar_plot_from_mat.R:88:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L88) *style:* **lines should not be more than 80 characters.**
```r
  else if ((length(contour_breaks_source == 1)) & (contour_breaks_source[1] == 2)){
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:88:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L88) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  else if ((length(contour_breaks_source == 1)) & (contour_breaks_source[1] == 2)){
           ^
```
[R/polar_plot_from_mat.R:89:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L89) *style:* **Use two spaces to indent, never tabs.**
```r
	  lines(xy$x, xy$y, col = gray(.2), lwd = .5)
^
```
[R/polar_plot_from_mat.R:89:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L89) *style:* **Use <-, not =, for assignment.**
```r
	contour_breaks = seq(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE),
                       ^
```
[R/polar_plot_from_mat.R:89:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L89) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE),
                      ~^~
```
[R/polar_plot_from_mat.R:89:43:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L89) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE),
                                         ~^~
```
[R/polar_plot_from_mat.R:89:63:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L89) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE),
                                                             ~^~
```
[R/polar_plot_from_mat.R:90:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L90) *style:* **Use two spaces to indent, never tabs.**
```r
	})
^
```
[R/polar_plot_from_mat.R:90:52:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L90) *style:* **Put spaces around all infix operators.**
```r
						 by=(max(Mat,na.rm=TRUE)-min(Mat,na.rm=TRUE))/(contour_levels-1))
                                                  ~^~
```
[R/polar_plot_from_mat.R:90:53:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L90) *style:* **Place a space before left parenthesis, except in a function call.**
```r
						 by=(max(Mat,na.rm=TRUE)-min(Mat,na.rm=TRUE))/(contour_levels-1))
                                                    ^
```
[R/polar_plot_from_mat.R:90:67:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L90) *style:* **Put spaces around all infix operators.**
```r
						 by=(max(Mat,na.rm=TRUE)-min(Mat,na.rm=TRUE))/(contour_levels-1))
                                                                 ~^~
```
[R/polar_plot_from_mat.R:91:4:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L91) *style:* **Trailing whitespace is superfluous.**
```r
  }
   ^
```
[R/polar_plot_from_mat.R:92:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L92) *style:* **lines should not be more than 80 characters.**
```r
  else if ((length(contour_breaks_source) == 2) & (is.numeric(contour_breaks_source))){
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:92:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L92) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  else if ((length(contour_breaks_source) == 2) & (is.numeric(contour_breaks_source))){
           ^
```
[R/polar_plot_from_mat.R:93:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L93) *style:* **lines should not be more than 80 characters.**
```r
	print(paste0("Manual contour range set from ", contour_breaks_source[1], " to ", contour_breaks_source[2]))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:94:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L94) *style:* **Use <-, not =, for assignment.**
```r
	contour_breaks = pretty(contour_breaks_source,n=contour_levels)
                       ^
```
[R/polar_plot_from_mat.R:94:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L94) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = pretty(contour_breaks_source,n=contour_levels)
                      ~^~
```
[R/polar_plot_from_mat.R:94:56:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L94) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = pretty(contour_breaks_source,n=contour_levels)
                                                      ~^~
```
[R/polar_plot_from_mat.R:95:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L95) *style:* **Use two spaces to indent, never tabs.**
```r
	# internals for axis markup
^
```
[R/polar_plot_from_mat.R:95:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L95) *style:* **Use <-, not =, for assignment.**
```r
	contour_breaks = seq(contour_breaks_source[1],contour_breaks_source[2],
                       ^
```
[R/polar_plot_from_mat.R:95:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L95) *style:* **Put spaces around all infix operators.**
```r
	contour_breaks = seq(contour_breaks_source[1],contour_breaks_source[2],
                      ~^~
```
[R/polar_plot_from_mat.R:96:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L96) *style:* **Use two spaces to indent, never tabs.**
```r
	RMat <- function(radians){
^
```
[R/polar_plot_from_mat.R:96:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L96) *style:* **lines should not be more than 80 characters.**
```r
						 by=(contour_breaks_source[2]-contour_breaks_source[1])/(contour_levels-1))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/polar_plot_from_mat.R:96:52:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L96) *style:* **Put spaces around all infix operators.**
```r
						 by=(contour_breaks_source[2]-contour_breaks_source[1])/(contour_levels-1))
                                                  ~^~
```
[R/polar_plot_from_mat.R:96:53:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L96) *style:* **Place a space before left parenthesis, except in a function call.**
```r
						 by=(contour_breaks_source[2]-contour_breaks_source[1])/(contour_levels-1))
                                                    ^
```
[R/polar_plot_from_mat.R:96:78:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L96) *style:* **Put spaces around all infix operators.**
```r
						 by=(contour_breaks_source[2]-contour_breaks_source[1])/(contour_levels-1))
                                                                            ~^~
```
[R/polar_plot_from_mat.R:97:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L97) *style:* **Use two spaces to indent, never tabs.**
```r
	  matrix(c(cos(radians), sin(radians), -sin(radians), cos(radians)), ncol = 2)
^
```
[R/polar_plot_from_mat.R:98:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L98) *style:* **Use two spaces to indent, never tabs.**
```r
	}
^
```
[R/polar_plot_from_mat.R:98:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L98) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  else {stop("Invalid selection for \"contour_breaks_source\"")}
       ^
```
[R/polar_plot_from_mat.R:98:64:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L98) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  else {stop("Invalid selection for \"contour_breaks_source\"")}
                                                               ^
```
[R/polar_plot_from_mat.R:99:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L99) *style:* **Use two spaces to indent, never tabs.**
```r

^
```
[R/polar_plot_from_mat.R:99:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L99) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:100:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L100) *style:* **Use two spaces to indent, never tabs.**
```r
	circle <- function(x, y, rad = 1, nvert = 500){
^
```
[R/polar_plot_from_mat.R:101:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L101) *style:* **Use two spaces to indent, never tabs.**
```r
	  rads <- seq(0,2*pi,length.out = nvert)
^
```
[R/polar_plot_from_mat.R:101:7:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L101) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if ((length(col_breaks_source) == 1) & (col_breaks_source[1] == 1))
      ^
```
[R/polar_plot_from_mat.R:102:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Use two spaces to indent, never tabs.**
```r
	  xcoords <- cos(rads) * rad + x
^
```
[R/polar_plot_from_mat.R:102:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
  ^
```
[R/polar_plot_from_mat.R:102:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Use <-, not =, for assignment.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
       ^
```
[R/polar_plot_from_mat.R:102:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
      ~^~
```
[R/polar_plot_from_mat.R:102:17:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                ^
```
[R/polar_plot_from_mat.R:102:22:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                    ~^~
```
[R/polar_plot_from_mat.R:102:29:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                            ^
```
[R/polar_plot_from_mat.R:102:35:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                                  ^
```
[R/polar_plot_from_mat.R:102:40:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                                      ~^~
```
[R/polar_plot_from_mat.R:102:47:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L102) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  {zlim=c(min(z,na.rm=TRUE),max(z,na.rm=TRUE))}
                                              ^
```
[R/polar_plot_from_mat.R:103:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L103) *style:* **Use two spaces to indent, never tabs.**
```r
	  ycoords <- sin(rads) * rad + y
^
```
[R/polar_plot_from_mat.R:103:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L103) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  else if ((length(col_breaks_source) == 1) & (col_breaks_source[1] == 2))
           ^
```
[R/polar_plot_from_mat.R:104:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Use two spaces to indent, never tabs.**
```r
	  cbind(xcoords, ycoords)
^
```
[R/polar_plot_from_mat.R:104:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
  ^
```
[R/polar_plot_from_mat.R:104:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Use <-, not =, for assignment.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
       ^
```
[R/polar_plot_from_mat.R:104:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
      ~^~
```
[R/polar_plot_from_mat.R:104:19:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                  ^
```
[R/polar_plot_from_mat.R:104:24:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                      ~^~
```
[R/polar_plot_from_mat.R:104:31:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                              ^
```
[R/polar_plot_from_mat.R:104:39:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Commas should always have a space after.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                                      ^
```
[R/polar_plot_from_mat.R:104:44:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Put spaces around all infix operators.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                                          ~^~
```
[R/polar_plot_from_mat.R:104:51:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L104) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  {zlim=c(min(Mat,na.rm=TRUE),max(Mat,na.rm=TRUE))}
                                                  ^
```
[R/polar_plot_from_mat.R:105:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L105) *style:* **Use two spaces to indent, never tabs.**
```r
	}
^
```
[R/polar_plot_from_mat.R:105:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L105) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  else if ((length(col_breaks_source) == 2) & (is.numeric(col_breaks_source)))
           ^
```
[R/polar_plot_from_mat.R:106:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L106) *style:* **Use two spaces to indent, never tabs.**
```r

^
```
[R/polar_plot_from_mat.R:106:3:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L106) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {zlim=col_breaks_source}
  ^
```
[R/polar_plot_from_mat.R:106:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L106) *style:* **Use <-, not =, for assignment.**
```r
  {zlim=col_breaks_source}
       ^
```
[R/polar_plot_from_mat.R:106:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L106) *style:* **Put spaces around all infix operators.**
```r
  {zlim=col_breaks_source}
      ~^~
```
[R/polar_plot_from_mat.R:106:26:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L106) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  {zlim=col_breaks_source}
                         ^
```
[R/polar_plot_from_mat.R:107:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L107) *style:* **Use two spaces to indent, never tabs.**
```r
	# draw circles
^
```
[R/polar_plot_from_mat.R:107:8:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L107) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  else {stop("Invalid selection for \"col_breaks_source\"")}
       ^
```
[R/polar_plot_from_mat.R:107:60:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L107) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
  else {stop("Invalid selection for \"col_breaks_source\"")}
                                                           ^
```
[R/polar_plot_from_mat.R:108:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L108) *style:* **Use two spaces to indent, never tabs.**
```r
	if (missing(circle.rads)){
^
```
[R/polar_plot_from_mat.R:108:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L108) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/polar_plot_from_mat.R:109:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L109) *style:* **Use two spaces to indent, never tabs.**
```r
	  circle.rads <- pretty(c(0,outer.radius-.4))
^
```
[R/polar_plot_from_mat.R:110:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L110) *style:* **Use two spaces to indent, never tabs.**
```r
	}
^
```
[R/polar_plot_from_mat.R:111:1:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L111) *style:* **Use two spaces to indent, never tabs.**
```r

^
```
[R/polar_plot_from_mat.R:111:12:](https://github.com/bcohn12/retina/blob/eeb6326c634d31d16c94a2945b75169b6cc1ff6a/R/polar_plot_from_mat.R#L111) *style:* **Use <-, not =, for assignment.**
```r
  Mat_plot = Mat
           ^
```


Yes it does no worries.  :)

I am a bit surprised Google defaulted to clang.  Are we going to change the Linux build process to clang, to match this requirement?


Путь


For some odd reason, simply re-ordering some of the elements in the alternative branch allows unmounting to occur properly. (no changes in the actual mounted component made any difference -- even replacing it with a super simple one, still had the same results)


Переименовать


The triangle in the top right of the map displayer shows that you can set the robot's position using UpdatePosition


Отменить


This commit displays the number of het and hom individuals within the UI, but for that to work, the underlying `gt_het` and `gt_hom` values need to track the number of het and hom individuals. The typos I mentioned mean are the place where this should be updated. Not only is it not correctly tracking these values, it is mistracking the allele count, too, which is used for the database frequency calculation.


Niiiiiice


One of the best commit names ever.


My findings for everything python+darwin is basically like this:
- pythons distutils stuff has problems calling `clang++` for C++ files and calls `clang` instead. (I think I've also seen situations where `clang++` was actually called)
- Apple's `clang` is built in a way that it knows about `libstdc++` and compiles the C++ stuff just fine, so cython stuff works in a non-nix setting.
- nix-`clang` barfs on C++ because it doesn't know about the libcxx include path.
I'm not sure if we should make nix-`clang` C++ aware or try to fix the distutils stuff. In any case I've been playing around with this quite a bit without a solution and I would need to send the bat-signal for tips from @copumpkin  🎃


Implementei um simples retry_server... Nem me dei ao trabalho de ver se já tinhas algum do lado de servidor. Espero que os free estejam bem feitos! Dêm uma olhadela no código sff!
Até amanhã


Изменение имени файла
sounds much better in Russian


Изменение имени папки
sounds much better in Russian


Показать скрытую папку


This argument is getting too meta.

\*eats popcorn inside popcorn*


What is this your 4th bag of popcorn


@jlestz I believe this should be
void Grid::newField_(double*** fieldPt) {
i.e. one less star, since we are passing in a double *** pointer correct? (one for each dimension). this comes up in the deleteField too


I should probably stop eating popcorn before popcorn starts appearing inside popcorn inside popcorn that appeared inside popcorn.


hahahaha


要するに微調整


![](https://github.trello.services/images/mini-trello-icon.png) [Version actuelle rapport](https://trello.com/c/52Bl8SD5/91-version-actuelle-rapport)


@notedit How I use your modified repo my brother, I have plan to uae JWT Auth for my websocket


it was package private, not public


Yeah, its actuially fixed.


it's funny because

![image](https://cloud.githubusercontent.com/assets/14065974/20863772/514a9a6a-b9a4-11e6-9877-d6d4967e3abf.png)


Haha I'm surprised he left mine! Last time we talked we weren't exactly fishing buddies.


This is incorrect.


sdasfasfasf


Yes, I missed that. Thanks! Fixed in 0d20e3adf1.


I ask this because if there is an issue with it or the eventual pixel framework I'm going to implement, I'd like to be able to reference picks of this commit to see what can be fixed and added


Yeah but there might be differences between the visual studio channels (community / enterprise / etc) and the Qt configurations.


comeback


通过新建一个文件完成第二个版本的实现，版本号生成一个40位的16进制数，通过修改增加了文件出现的第二个版本可以看到当前的这个版本的版本号和上一级的版本号，即parent的版本号。


I know. The issue is that the network/bus containing relationship has been updated recently. So this might have some impact on your previous implementation.


jijijijiji


Nice catch! Thanks


@ColCarroll Why is mkl-service needed in PyMC3? Is this Intel MKL library support or something else?


Upload


It is only in the controller we would like to verify the password, here the service just pulls up the user from the database and shuttles it back into the controller


It is the controller that commands this service to login and trigger the caching of the user. Since now the controller does the authentication it makes sense the controller only would tell the service to cache the user


@jinjingfarm  I got a class casting error within this function after the ipss.core update, could you run this test case on your side to help check the issue?


After / stop, something similar to "clesh" is displayed.


计划是要等明年了


Σε αυτό το σημείο, διαβάζω τους καθηγητές/καθηγήτριες στον πίνακα με τις εφημερίες και προσθέτω όλα τα ονόματα στον πίνακα teachers.
Δυστυχώς υπάρχουν ονόματα με κενά στο τέλος, οπότε επειδή κάπου τα βγάζουμε (http requests) και κάπου τα βάζουμε(copy paste στο excel), δημιουργουν προβλήματα. Πρέπει απο παντού να τα βγάζουμε.


I can get the tests to pass for this too.

```rb
# app/models/starship.rb
has_many :evaluations, through: :crew_members
```

```rb
# app/controllers/starships_controller.rb
@recent_evaluations = @starship.evaluations.recent
```

```rb
# spec/models/evaluation_spec.rb
results = starship_1.evaluations
```


Incomplete (0) Does Not Meet Expectations (1) Meets Expectations (2) Exceeds Expectations (3)

1.1) 3
1.2) 3
1.3) 2
2) 2 (Note last row is summary)
3.1) 2
3.2) 3
4.1) 2
4.2) 3
4.3) 0
5.1) 2
5.2) 2
5.3) 3
5.4) 3
6.1) 2
6.2) 3
6.3) 0
7) 3
8.1) 2
8.2) 0
9) 1 (See solutions for dealing with stores that were not open the full 12 months)
10.1) 2
10.2) 2
10.3) 2
10.4) 3
10.5) 3
11) 3
12) 0

Total  56/81

**Things that worked really well:**
- Great job using bar plots to visualize relationships in 10 and 11
- Great job using user defined functions with map to clean up data.
- Project shows a strong grasp of using pandas. Well done.

**Suggestions**
- Clear you have a strong grasp of material. Time permitting give the bonus/challenge problems a shot.
- Take a look at 9 for some ideas on how to go about imputing missing values
- Keep practicing fine tuning plotting. 3.1 could have plotted verbal and math with shared X axis to make more easily comparable for example.


oye esta linea debería tener un margin-bottom de 3px


I can duplicate the problem. I will do some investigation.


isn't this necessary any more?


and this?


you don't need to write a constructor here. If no constructor provided, it will automatically use the default constructor :p


I honestly just feel like deleting this emotional battleground. Everyday I'm getting some piece of crap that Jordan said, then everyone reacts to it.

Grow up.


well not really a fix because it breaks some other stuff ;)


By original font, I meant I tried to replicate a font style I found online. It came out nicely, though the C diverges from the original style.


> I was thinking about approaching Comatose in the opposite direction - keep its status as slp but just don't show it in the hpstring.

That's an interesting concept, but does it imply the correct mechanics in all accounts?

> Also I had an idea for avoiding these almost identical lists of abilities by putting a flag on those abilities that are locked

+1


lgtm, thanks.


I just updated, and now I am not getting any diagnostics... do I need to do anything special?


Doing it the opposite way would require even more hardcoding than this; several effects check for `status` alone, and do not care about Comatose.

Re: Gastro Acid, yes Comatose is immune, but that means it's also immune to Baton Passing the Gastro Acid effect to it, hence the necessity to include the same Gastro Acid list in ignoringAbility too. That's something that should have been done a long time ago, but I only realized while working on Comatose that it was bugged.


@martincz so you know the fix?
tell us


Issue #16


@asial-matagawa is there a reason for this change? Is it simply due to a lack of testing, or does Onsen UI use features Windows Phone 10+ does not support?


Such ignores should be done globally by each developer :'(


Hmm, strange. The only thing that should have changed is that there's an autosave timer now which will also trigger the diagnostics. Let me try to update from the marketplace and see if I have problems.

Can you try manually setting [this](https://github.com/freebroccolo/vscode-sml/blob/1c6e5807c24103ce42dadf07baff9bc0ccba0f75/package.json#L31) value to see if it has any effect?


@freebroccolo the really weird thing is that when I run the extension from source, it works fine. But when I run it from having installed it in the usual way, it doesn't seem to work.


(and manually setting that value seems to have no effect)


Didn't know you had a particular reason for keeping it. Commit Authorship should've been enough. But i can assure you, there's no issues with it ;)


Yeah, I'm just noticing that now also, about it working from source but not from the marketplace. Wonder what could be causing that…


Oh hey, @bigrushdog and @Mazda--  How ya been buddies? LOL


Woo! Thanks @chrislovecnm


Best scoring ensemble


Indentation is an extra level deep here.


@ashleyfrieze regarding your earlier comment on this change, [this spec](https://github.com/greghaskins/spectrum/commit/1bc5e07f3f260a44667ba216f3993ace1e29629a#diff-917999cf172aed16de24989a9d1d3d1fR103) failed before I made the changes above. When I played with the API, one of the first things I tried was tagging some specs and trying to use the filters to run different subsets. Implementation aside, I do think it is how `includeTags()` should behave.


这个是课设程序介绍


update


I think I know what the problem is. Going to push a new version in a few minutes.


Incomplete (0) Does Not Meet Expectations (1) Meets Expectations (2) Exceeds Expectations (3)

1.1) 2 (See solution for loading in dictionary as you go instead of looping through all of the data twice)
1.2) 3
1.3) 3
2) 2
3.1) 2
3.2) 1 (Don't forget description)
4.1) 3
4.2) 3
4.3) 2 (Don't forget to explain rationale)
5.1) 2
5.2) 2
5.3) 3
5.4) 3
6.1) 2
6.2) 3
6.3) 1
7) 3
8.1) 3 (Think about how you can use columns method and or dtypes to iterate over column list to do checks instead of explicitly listing out columns)
8.2) 2 (knocked out a lot of this in 8.1)
9) 2
10.1) 2
10.2) 2 (Make sure to print results at least head)
10.3) 2 (Make sure to print results at least head)
10.4) 2
10.5)  0
11) 0
12) 0

Total  54/81

**Things that worked really well:**
- Excellent/very thorough job with data cleaning
- Project shows great grasp of pandas. Excellent work.

**Suggestions**
- On the histograms less is more for the # of bins used (5.2 for example)
- Take a look at solutions for bonus material and last few problems.


Can we add a note here to the effect

```
// Note: we have to use `stringify` and `parse` here because of how lunr performs serialization. Specifically, in order to serialize an index, one must recursively call serialization methods (`*.toJSON()`) on nested data structures, which `JSON.stringify()` does automatically.


This, incidentally, deleted the assets/ directory, because without that file it became empty. If you end up putting something into the assets/ directory and committed it, it would recreate the directory.


This was just a merge commit which by itself didn't seem major enough to trigger a build outside of my regular check-ins-and-postings. It's already posted now, anyway. In the future, you will get faster communication from me using either the DRD Team or ZDoom forums, as I do not check Github as frequently.


@jonsterling I think the problem was that one of the dependencies wasn't specified for the non-development version. Can you try to update and see if it's working now?


@freebroccolo ok, cool! Just updated and it works great now 😄


This is a broken reference. Should refer to the package.


`absolute-value` should refer to the package.


@effervescentia - this seems to have made SAYT's own structure useless, the global structure seems to always take precedence.


`float64-eps` should refer to the constant package.


`float-eps` should be the package name.


Also need to update `regexp-dirname-windows` and `regexp-dirname-posix`.


Remove the backtick.


Already fixed in subsequent commit. I went through the links by using `grep` looking through `math-io`, `const-io` etc. one after the other. In hindsight, would have been better to fix the files entirely in one wash.


Wrong Commit


ciocia @marcelinkaaa please pull and try again, should be better now.


Alternatively, you can do multiple commits, and then, before you push, squash into a single commit. Just be sure not to pull down any changes, etc, during the interim.


Thanks for catching this!


Incomplete (0) Does Not Meet Expectations (1) Meets Expectations (2) Exceeds Expectations (3)

1.1) 2 (See solutions for doing in 1 go so don't have to loop through all data twice)
1.2) 3
1.3) 2
2) 2 (Note that last row is all)
3.1) 2 (Less is more on bins in histogram)
3.2) 1 (Don't forget the explanation)
4.1) 3
4.2) 1 (Don't forget the explanation)
4.3) 0
5.1) 3
5.2) 1 (How does it compare?)
5.3) 3
5.4) 2
6.1) 2 (Careful on the print)
6.2) 1 (You're killing me on explanations!)
6.3) 1
7) 2
8.1) 2 (I would explore other alternatives before dropping NAs. Can missing values be imputed?)
8.2) 0
9) 1 (On right path with this. Check solutions for example of how to implement)
10.1) 2
10.2) 2
10.3) 2
10.4) 2
10.5)  2 (Don't forget print. Maybe a good example to plot as well...)
11) 2
12) 0

Total  46/81

**Things that worked really well:**
- Great job. Project shows a strong understanding of using pandas.
- Good job detailing out steps you would have taken for 9. Great to see thought process even if didn't have time to work clear through. Keep it up!

**Suggestions**
- Careful to answer all parts of questions (lots were asking for interpretation of plots for example)
- Take a look at solutions for problems you didn't get to finish.
- Give me a shout earlier in week if you need help getting jump start on project.


I fixed the gitignore.


The problem with this implementation is in the receiverTable method, it need to recvfrom, and send in the same thread, and when it is sending stuff, it takes some time, since it use a for loop to send the update distance to all its neighbors, at same time some node might send data to the current node, so it is not able to receive it. the data will be lost (since it is udp)


You can also do your own setOnClick helper method and pass the  resource and class as parameters:
public class MainActivity extends AppCompatActivity {

    @Override
    protected void onCreate(Bundle savedInstanceState) {
        //...
       //Set OnClick Listeners for each activity
        setCustomOnClickListener(R.id.numbers, NumbersActivity.class);
        setCustomOnClickListener(R.id.family, FamilyActivity.class);
        setCustomOnClickListener(R.id.colors, ColorsActivity.class);
        setCustomOnClickListener(R.id.phrases, PhrasesActivity.class);
    }

   // modified method..
     public void setCustomOnClickListener(int resourceID, final Class className) {
        View view = findViewById(resourceID);
        view.setOnClickListener(
                new View.OnClickListener() {
                    @Override
                    public void onClick(View view) {
                        Intent intent = new Intent(view.getContext(), className);
                        startActivity(intent);
                    }
                }
        );
    }


Thanks!


actually that was for a bit edge case if some instance was cast into `Object` and then into `Revision`, but generally that may not be needed. addressed all in 0408c9a3159f7e130e524f74d8fbbbca4acffc41


Executing the daily benchmark build, I will reply here when finished:

@nanosoldier `runbenchmarks(ALL, isdaily = true)`


Once the package re-installed (using `install_github()`) your vignette works well up to code chunk 17 for which I get the error below. It's not the detection of `multinomialToJags()`(which simply exports the jags files in temporary when needed):

> Quitting from lines 127-128 (BayesTutorial.Rmd)
Error in checkForRemoteErrors(lapply(cl, recvResult)) :
  2 nodes produced errors; first error: RUNTIME ERROR:
Cannot insert node into alpha[1:200]. Dimension mismatch


@SharkChips
It is due to a lack of testing.
Formerly Onsen UI supported Windows Phone well but now that we have not been able to support it due to scarce resources.
So we decided to remove `Windows Phone` from `Browser Support` section until we completely supports it.


This is no more an "insert". Probably you should create a separated "update" function.


hmm. I think the electronic id is universally unique.


@alcalyn What use case do you have to result in $v[0] to be undefined? Do you know the specific header in question?


THX！新版本很好的去掉优酷广告了！


Merge


@IISweePII It does lol


毕竟少用这玩意，但是还是要装装逼的