I'm sorry, my editor is configured for the conventions at my day job with Takt. I'm running spacemacs - is there a way you know of to do this on a per-project basis?


That is not necessary good. Because it reads tar files recursively as well. At least in my tar files sources were tar files again.


Osigui no ho veig pero per res JAJAJAJJAJAJA sorry no soy 100tifico


Why `adm`? This is used for system monitoring tasks. Members of this group were able to read many log files in /var/log.

IMO you wanted to use the group `abuild` or `wheel`.


*something goes wrong in previos, values does not changed


`Showing  1 changed file  with 29 additions and 19 deletions`
How can the commit message be 'No changes'?


Do I?


Why not rebase?  It's unusual to see these other commits here. And it may incur conflicts when merging to master.


probably need something like:

```
if [[ -n $exit ]]; then
    exit $code
fi
```

Otherwise, the test won't fail.


Better use OverloadedLists here


Thank you


This seems unnecessary.


The following doc(s) have been deployed to the [testingplu](https://testingplu-static-docs.pantheonsite.io/docs) Multidev environment:
- [docs/terminus/plugins/create](https://testingplu-static-docs.pantheonsite.io/docs/terminus/plugins/create)


Really, there's nothing CSV-specific here.


I made some changes but then did a control-Z to remove the changes before committing.


Here, you are trying to reuse the entire `TLS_SOCKET` (which is actually a good idea, but handling failure gracefully is def. needed).

To reuse the TLS ticket here, I think you need to add `session: TLS_SESSION`.
Not sure what happens when it's not yet defined  :P  (Perhaps do a `TLS_SESSION = undefined` or something on cold start, I'm not a Node person)


What do you think ?


I accept your offering.


Test stopped because patch is non-functional. Sorry.


Hmm true. I wanted some kind of error message in case some "root" file couldn't be read. Going to revert that one and write something more suitable.


Can also add it's now 30% or more faster than before.


Released to Kinetic: https://github.com/ros/rosdistro/pull/14207

Will do Indigo for you when the dust settles a bit.


Try getting rid of `display: inline-block;` and instead try `margin: 0 auto;` just like we were doing in class.


This level of wrapping might be a bit too much. Maybe just put the body on a new line, and when needed cut the argument list in two lines?


Should probably say `Fix MVM_string_equal_at_ignore_case when string haystack changes length when casefolding`


You can do this in one line and this saves a step of memory allocation for a new variable 'correct'.

`return Integer.parseInt(theEntry.getText().toString().trim()) == (theQuestion.getLeftOperand() + theQuestion.getRightOperand());`


Nie czytałem całego wpisu. Odnosłem się do komentarza efika. Wysywigowanie - czyli wyklikanie całego wyglądu aplikacji


:clap: :clap: :clap:


Just `DataArray{T}(rows)`, and same below?


@mitar
See 7cf8c699cb400da3e2b94ee3ee70c9b98ceaa9d7 . Should fix it.


yep cuz of the update , its not working...


Actually, some devices have that fingerprint sensor, for example, mine (Redmi Note 3 Pro 3GB/32GB), that varies from a device to device, maybe there were only a few batches with that sensor, but it's still true - Goodix sensors were used on some RN3s.

I had lots of troubles getting it to work in CM13 but this issue has now gotten into Lineage OS which I was about to try... If you google for "redmi note 3 cyanogenmod fingerprint", you'll find a bunch of sad threads and guides that require you to flash kernels (like Radon) and other stuff. I have personally tried following several guides and only that radon thing made it finally work...

If the previous version of a rc-script was working with both sensors, can this change please be reverted so less skilled enthusiasts won't be doing stupid and desperate things flashing suspicious stuff only to get the sensor working?

P. S. If you need any information on my device, please feel free to ask.


To check it works fine


![](https://github.trello.services/images/mini-trello-icon.png) [CRUD de Usuarios - Cargar tablas con permisos de roles sobre módulos](https://trello.com/c/8Wh5HSu5/2-crud-de-usuarios-cargar-tablas-con-permisos-de-roles-sobre-modulos)


Скажу сразу, вывод нигде не нужен. Если мы спрашиваем станцию, какие на ней поезда, мы должны получить список поездов. А как именно их распечатать (если надо) решает код, вызвавший этот метод.


The following doc(s) have been deployed to the [testingplu](https://testingplu-static-docs.pantheonsite.io/docs) Multidev environment:
- [docs/terminus/plugins/create](https://testingplu-static-docs.pantheonsite.io/docs/terminus/plugins/create)


Pridal som tu podporu 0ca941c1176d2d7b088039daca3a944b3b9be594. Popritom som par kompnentov prepisal na funkcionalne a zbavil sa `Object.assign` v celom kode :-)


можно `unless type`


OK


Oh sorry ! I changed `Mac::valid()` for testing purpose ! Forgotten to remove the changes 👎


хеш с числовым ключом по своей сути массив :) посмотри лучше, какие есть методы для работы с массивом в документации руби


No es "mejor" dejarlo en un paquete diferente para bootstrap??


@dlinch I'm super proud of you for pulling this off buddy.


Currently, phylogenies specifying society mappings via `xd_ids` will not be linked to languages - I still have to investigate why that might make sense. Thus, if you specify more than just the glottocode, you may win in terms of specificity of society linking, but you lose the language linking - which means the phylogeny will not show up as tree when societies are selected via language family only.


Welcome back ☺


а первое условие нужно? намного выразительнее `ar.first` и `ar.last`


можно указывать через запятую
```
attr_reader :route, :number, :type, :wagons_number
```


That constructor doesn't work for me
```julia
julia> DataArray{String}(10)
ERROR: MethodError: Cannot `convert` an object of type Int64 to an object of type DataArrays.DataArray{String,N}
This may have arisen from a call to the constructor DataArrays.DataArray{String,N}(...),
since type constructors fall back to convert methods.
 in DataArrays.DataArray{String,N}(::Int64) at ./sysimg.jl:53

julia> DataVector{String}(10)
ERROR: MethodError: Cannot `convert` an object of type Int64 to an object of type DataArrays.DataArray{String,1}
This may have arisen from a call to the constructor DataArrays.DataArray{String,1}(...),
since type constructors fall back to convert methods.
 in DataArrays.DataArray{String,1}(::Int64) at ./sysimg.jl:53

julia> DataArray{String, 1}(10)
ERROR: MethodError: Cannot `convert` an object of type Int64 to an object of type DataArrays.DataArray{String,1}
This may have arisen from a call to the constructor DataArrays.DataArray{String,1}(...),
since type constructors fall back to convert methods.
 in DataArrays.DataArray{String,1}(::Int64) at ./sysimg.jl:53
```


последнее, кстати, можно подумать, что это номер вагона оО


no problem :D happens to me all the time


What do you mean?


Hello @collinss
In case you will refactor these fields next time and respectively adjust the script which generates the spices website, I have a suggestion to use a `current_maintainer` field for the one currently responsible for an applet. As mentioned in the commit message here: https://github.com/linuxmint/cinnamon-spices-applets/commit/3eae695f8d10eafa10127b8113a586c780c3ec26
Then field `"current_maintainer": "none"` will make more sense, in my opinion.


I apologize if we come up as too focused on coding style. It just simplifies things for us, tremendously ,when the code looks the way we are used to. Our coding style is somewhat specific, but it's based on hard earned experience.

Regarding editor support. I'm not an Emacs user so I'll be of no use, hopefully some of my colleagues will help you with that. What I can do is point you to a fork of [`stylish-haskell`](https://github.com/Siprj/stylish-haskell) from one of our colleagues. I was told that it should support some of our idiosyncrasies already.


`if position` вернет `true`, если оно передано


No worries! I'll figure out a solution. Thanks for the help :)


`self` указывать необязательно, по-умолчанию метод и так вызовется у текущего объекта


а если вагонов нет?


Opened https://github.com/Microsoft/bond/issues/368 so we don't forget about this, as this conversation is only attached to commit 13ed9a54a831b62e05ec34e and is easy to lose track of.


поезд обречён ходить по одному маршруту? :)


<details>

<summary>No TaskCluster jobs started for this pull request</summary>

```js

The `allowPullRequests` configuration for this repository (in `.taskcluster.yml` on the
default branch) does not allow starting tasks for this pull request.
```

</details>


There were the following issues with your Pull Request

  * A "License" and a "Signed-off-by" trailers are required. See [the guidelines about this](https://github.com/ipfs/community/blob/master/contribution-guidelines.md#a-license-and-a-signed-off-by-trailers-are-required)

We ask for a few features in the commit message for Open Source licensing hygiene and commit message clarity.
`git commit --amend` can often help you quickly improve the commit message.
[Guidelines](https://github.com/ipfs/community/blob/master/contribution-guidelines.md#commit-messages) and [a script](https://github.com/ipfs/community/blob/master/dev/hooks/setup_commit_msg_hook.sh) are available to help in the long run.
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department-of-veterans-affairs/caseflow#1090


@bkueng should param_wbuf_s be in a common header somewhere? I think there's about 4 identical definitions of it across the codebase.


\(O.O)/


趣味欄の追記等について、気付いてくださりありがとうございます。


oh boy


Too bad. Looks like DataArrays hasn't been updated to new conventions...


@bemcdonnell invited me to commit the other day and I got to thinking about what is keeping me from diving in ...

For the sake of simplicity I think my contributions either on or off the clock should be considered in the Public Domain. It would be useful to use the git log to identify the contributions in the Public Domain -- legacy code and current contributions from Govt employees -- and differentiate them from contributions from authors with copyright.

There are essentially two classes of authors ones with copyright and ones without. That could be the same person at different points in their career. Like if I separate from the US EPA my contributions after that date would have copyright but prior to that they would not. I think if we get this figured out my last excuse to stop developing in my EPA stovepipe would be removed.

 ... besides being prone to confusion ;)


This commit should have a "Minor - " prefix so it can be ignored by the changelog generator


NewErrorWhenHoursShownInFirstColumnOfTable (JasonGlazer) - x86_64-Linux-Ubuntu-14.04-gcc-4.8: OK (2522 of 2522 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


worky inside standalone jar !


`if @route && position`


This test targets the following behavior: given a module Downstream that depends on a module Upstream, if we change the code of Upstream it should not change the datasetHash of Downstream.


Looks good - thanks for the commit.


Так и что такое `@position`? Станция? Не надо хранить станцию в поезде, храни только индекс станции, чтобы отслеживать перемещение поезда. Если понадобится узнать станцию - найдёшь её по индексу


NewErrorWhenHoursShownInFirstColumnOfTable (JasonGlazer) - x86_64-Linux-Ubuntu-14.04-cppcheck-1.61: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


Wow - jakie fajne wyrażenie! 👍


Are you able to drop `acorn-es7-plugin`?


Этот метод получился очень нагруженным. Разбей его лучше на два отдельных метода - для движения вперёд и для движения назад.


Look into Ruby's built in Benchmark library. I think you'll find that fun.


Indentation should be two spaces, not four.


Published


Test


There should only be empty line breaks between methods, otherwise, good!


Love your use of parentheses.


@FroMage please review this change.


This line fails unless the OUTPUT dir is `spack` in the swift-t root (I used `/tmp/swift-spacks`).


Is there another way to lay out or structure your conditionals without having to nest them?


The following doc(s) have been deployed to the [drupal8com](https://drupal8com-static-docs.pantheonsite.io/docs) Multidev environment:
- [/docs/guides/drupal8-commandline](https://drupal8com-static-docs.pantheonsite.io/docs/guides/drupal8-commandline/)
- [docs/guides/wordpress-commandline](https://drupal8com-static-docs.pantheonsite.io/docs/guides/wordpress-commandline)
- [source/docs/assets/images/drupal8-commandline--connection-info.png](https://github.com/pantheon-systems/documentation/commit/d2aad5df44a48fb757682a686ef6840b718c2896/source/docs/assets/images/drupal8-commandline--connection-info.png)
- [source/docs/assets/images/drupal8-commandline--dashboard-sites.png](https://github.com/pantheon-systems/documentation/commit/d2aad5df44a48fb757682a686ef6840b718c2896/source/docs/assets/images/drupal8-commandline--dashboard-sites.png)


I like the super explicit parens.


Może więcej informacji daj o tych skrótach sobie? :)


Might want to use more parens here to make this a bit visually clearer.


You should add a something here about how we store the feedback documents. Older feedback should still be accessible. (Ex. D+M Global feedback is split into almost 10 subtasks with some feedback inline, other feedback in attatched documents). Feedback should all be kept in one place.


Avoid using ternaries, they shorten things up and increase difficulty of reading your code to no real benefit.


Methods where you expect only a `true` or `false` result should end in a question mark so , `def div_by_five?`


Using predicate methods like this is 💯


Delete CNAME


addressing #198 as discussed over there.


Thanks mate, by the time I realised I already committed and pushed it up.
The above made it tracked by git so gitignore wasnt working, had to run this command git rm -r --cached .idea/.
Just deleted them folders now and pushed changes


Your use of predicate methods here is 💯


These guard statements here are legit.


I just sat down and started guessing parameters that could offset the returned videos, I noticed `&index=...` affects the output, although it's not very obvious how exactly, because every way I tried it I had some overlaps that needed to be cleared with distinct. With this it now works on large playlists (>200 vids) and returns in bigger batches (200 vids per batch instead of 50), but as a downside it also contains a lot of unnecessary metadata that bumps the file size quite a bit. Seems like the only clear advantage it has over your solution is that it returns playlist name, description and author.


However, I'd structure them like this:

```ruby
message += "Super" if divisible_by_7?(i)
```


develop (EnergyArchmage) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-IntegrationCoverage-Debug: OK (1888 of 1888 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-71.48%25-green.png)


В задании сказано, что нужны методы, которые бы возвращали: текущую, следующую и предыдущую станции. Сделай три отдельных метода. Не надо писать такие комбайны, которые делают сразу всё ) Есть такое правило: один метод - одна ответственность. Если тебе нужно спросить поезд, какая следующая остановка, как ты это сделаешь? )


@harveyj1953, I checked and it seems this is not fixed in mainline llvm. I committed your fix here: https://github.com/llvm-mirror/llvm/commit/39984d5813cf79959c014093f5b9a3c71a6d7272


There's no better solutions to this issue? I'm beginning to see some subtle flaws in Python's `typing` module.


You should note that use of pockets is discouraged in custom themes for critical components. Especially if there are a lot of them (bad example is edmunds) The core of the site is all in pockets. This makes the site much fragile and difficult to work with.


Hello @tgjeon ,

**_Nice work! Undisputedly the best LSTM code I have come across at Github._**

Do you have any plans of updating the code for tf 1.0? I would be happy to help you with whatever I can assist you with, at the moment I see that learn.TensorFlowEstimator has been replaced with learn.Estimator and most likely other items has changed/have become obsolete since TF 0.10. (I would be happy if I could work on the code myself but at this very moment I am away from my TF rig...but I will start working with and hopefully updating your code in one or two weeks when I'm back at home)

BR
Staffan


There is a better way to do this. Please, look into `each_wtith_index` Ruby


typo: benign


![](https://github.trello.services/images/mini-trello-icon.png) [Data format](https://trello.com/c/cM7EA1zV/51-data-format)


I might change this to a `number.times do` loop instead of an `until` loop = you're calculating the length of values each time you iterate, I suspect using times would be a bit more performant.


Parens might make this a little more readble, but otherwise great!


Assignment


![](https://github.trello.services/images/mini-trello-icon.png) [Data set save](https://trello.com/c/YcTY8ao1/59-data-set-save)


nice and clean


for what is this OFFLOAD?


I have a WIP DataArrays PR that implements the new conventions, I just need to actually finish it


bonous


@bobrik we have found that this commit from #39289 breaks plain multimaster, the minion continually tries to connect to the first master in the master list, even if it is down, and never tries any other masters, even after a minion restart.

If you wanna take a look at this, that would be great.  If it is still an issue on Monday, we are going to revert this because it is blocking a release.

cc: @cachedout @Ch3LL

Thanks!
Daniel


git checkout -- filename    does the job too

On Fri, Mar 17, 2017 at 1:52 PM, passanpm <notifications@github.com> wrote:

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> committing.
>
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>


http://lists.llvm.org/pipermail/openmp-dev/2017-March/001697.html

'Runtime contains the host runtime, most of the OpenMP functionality is
implemented there. Offload is a library for offloading to Xeon Phi, whereas
libomptarget is a device agnostic offload library'


Can a SPECHITS overflow occur on E2M5? Where?


Bluemix [toolchain](https://console.ng.bluemix.net/devops/toolchains/760b25fe-63c3-433f-832d-83b9d565f14c "acmefreight-lw"): [Delivery Pipeline](https://console.ng.bluemix.net/devops/pipelines/df551bf7-408d-439d-9bb8-22e438701e49 "webui (prod)") deployed this commit to [logistics-wizard](https://console.ng.bluemix.net/apps/9d287155-55af-42c6-9db2-26e64559ad20 "ibm:yp:us-south:rvennam@us.ibm.com:logistics-wizard")


I'll do that next.


It probably would have been easier to do this:

```
if post.id == 1 || post.id % 5 == 0
```


Then you can get rid of all of this.


Hi, my name is Milan and i just tried to run the Dressing room and i have an interesting problem - when i try to run dressing room i get the error DllNotFoundException: UnityInterface.dll that apparently starts here: 		uint rc = NiteWrapper.Init(new StringBuilder(".\\OpenNI.xml")); - line 508 of Nite.cs. After checking it appears that i from some reason do not have the dll file and can't seem to be able to find it. It would help me greatly if you could provide me with the dll - my email is milanzaric54@gmail.com.


could you use  5.6 instead of 5.8 ?
nice feature by the way !!! ;)


NewErrorWhenHoursShownInFirstColumnOfTable (JasonGlazer) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-UnitTestsCoverage-Debug: OK (1288 of 1288 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-37.47%25-green.png)


Assignment files


any questions regarding the above new implementations please refer to documentation!


kiva-init (EnergyArchmage) - i386-Windows-7-VisualStudio-14: OK (2482 of 2486 tests passed, 0 test warnings)

 * 4 tests had: EIO diffs.
 * 4 tests had: ESO big diffs.
 * 4 tests had: Table big diffs.
 * 1 test had: AUD diffs.
 * 1 test had: ERR diffs.
 * 1 test had: MTR big diffs.
 * 1 test had: SSZ big diffs.
 * 1 test had: ZSZ big diffs.

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.84%25-yellow.png)


This comment shoud have the # symbol, otherwise R will try to execute it returning an error.


Huh? But that was changed together with the tbz change?


кстати, если индекс окажется больше, чем есть в массиве, метод и так вернёт `nil`, так что эта проверка не обязательна )


Ooof, the `if` was not changed, just the inside. Oops!


Doppelt hält besser? ;)


ha, was doing something else, but AtomicBoolean sufficed, this got cleaned.


Is this work that could be brought back into ofxMidi?


can use mState?


adv-ss-nv-docs (jasondegraw) - x86_64-MacOS-10.9-clang: OK (2480 of 2480 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


on ubuntu I get: `Uncaught (in promise) TypeError: archive.fileTree.addNode is not a function
    at generate (main.js:1229)`


Makes it easier to actually write in the forbiddens, according to him.

However, I'd prefer to revert them back to what they originally were, except that it'd mean changing a bunch of pages back again...


do I miss a dependency?


No. GHC also has this file.


Why is this one incorrect? If you extend something in ASN.1, are you not supposed to put it under the "..." in order to maintain backwards compatibility?


[R/DEploidR.R:20:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L20) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromTxt <- function ( refFileName, altFileName ){
^~~~~~~~~~~~~~~~~~~~~~
```
[R/DEploidR.R:20:38:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L20) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromTxt <- function ( refFileName, altFileName ){
                                     ^~~~~~~~~~~
```
[R/DEploidR.R:20:51:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L20) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromTxt <- function ( refFileName, altFileName ){
                                                  ^~~~~~~~~~~
```
[R/DEploidR.R:49:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L49) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromVcf <- function ( vcfFileName, ADFieldIndex = 2 ){
^~~~~~~~~~~~~~~~~~~~~~
```
[R/DEploidR.R:49:38:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L49) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromVcf <- function ( vcfFileName, ADFieldIndex = 2 ){
                                     ^~~~~~~~~~~
```
[R/DEploidR.R:49:51:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L49) *style:* **Variable or function name should be snake_case.**
```r
extractCoverageFromVcf <- function ( vcfFileName, ADFieldIndex = 2 ){
                                                  ^~~~~~~~~~~~
```
[R/DEploidR.R:57:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L57) *style:* **Variable or function name should be snake_case.**
```r
    numberOfHeaderLines <- 0
    ^~~~~~~~~~~~~~~~~~~
```
[R/DEploidR.R:61:13:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L61) *style:* **Variable or function name should be snake_case.**
```r
            numberOfHeaderLines <- numberOfHeaderLines + 1
            ^~~~~~~~~~~~~~~~~~~
```
[R/DEploidR.R:73:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L73) *style:* **Variable or function name should be snake_case.**
```r
    sampleName <- names(vcf)[10]
    ^~~~~~~~~~
```
[R/DEploidR.R:78:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L78) *style:* **Variable or function name should be snake_case.**
```r
    tmpCovStr <- unlist(lapply(field, `[[`, ADFieldIndex))
    ^~~~~~~~~
```
[R/DEploidR.R:79:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L79) *style:* **Variable or function name should be snake_case.**
```r
    tmpCov <- strsplit(as.character(tmpCovStr), ",")
    ^~~~~~
```
[R/DEploidR.R:81:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L81) *style:* **Variable or function name should be snake_case.**
```r
    refCount <- as.numeric(unlist(lapply(tmpCov, `[[`, 1)))
    ^~~~~~~~
```
[R/DEploidR.R:82:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L82) *style:* **Variable or function name should be snake_case.**
```r
    altCount <- as.numeric(unlist(lapply(tmpCov, `[[`, 2)))
    ^~~~~~~~
```
[R/DEploidR.R:108:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L108) *style:* **Variable or function name should be snake_case.**
```r
extractPLAF <- function ( plafFileName ){
^~~~~~~~~~~
```
[R/DEploidR.R:108:27:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L108) *style:* **Variable or function name should be snake_case.**
```r
extractPLAF <- function ( plafFileName ){
                          ^~~~~~~~~~~~
```
[R/DEploidR.R:139:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L139) *style:* **Variable or function name should be snake_case.**
```r
plotProportions <- function (proportions, title = "Components",
^~~~~~~~~~~~~~~
```
[R/DEploidR.R:140:24:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L140) *style:* **Variable or function name should be snake_case.**
```r
                       cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                       ^~~~~~~
```
[R/DEploidR.R:140:37:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L140) *style:* **Variable or function name should be snake_case.**
```r
                       cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                    ^~~~~~~~
```
[R/DEploidR.R:140:51:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L140) *style:* **Variable or function name should be snake_case.**
```r
                       cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                                  ^~~~~~~~
```
[R/DEploidR.R:141:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L141) *style:* **Variable or function name should be snake_case.**
```r
    rainbowColorBin <- 16
    ^~~~~~~~~~~~~~~
```
[R/DEploidR.R:183:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L183) *style:* **Variable or function name should be snake_case.**
```r
plotAltVsRef <- function ( ref, alt, title = "Alt vs Ref",
^~~~~~~~~~~~
```
[R/DEploidR.R:184:21:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L184) *style:* **Variable or function name should be snake_case.**
```r
                    exclude.ref = c(), exclude.alt = c(),
                    ^~~~~~~~~~~
```
[R/DEploidR.R:184:40:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L184) *style:* **Variable or function name should be snake_case.**
```r
                    exclude.ref = c(), exclude.alt = c(),
                                       ^~~~~~~~~~~
```
[R/DEploidR.R:185:21:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L185) *style:* **Variable or function name should be snake_case.**
```r
                    cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                    ^~~~~~~
```
[R/DEploidR.R:185:34:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L185) *style:* **Variable or function name should be snake_case.**
```r
                    cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                 ^~~~~~~~
```
[R/DEploidR.R:185:48:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L185) *style:* **Variable or function name should be snake_case.**
```r
                    cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                               ^~~~~~~~
```
[R/DEploidR.R:189:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L189) *style:* **Variable or function name should be snake_case.**
```r
    tmpRange <- 1.1 * mean(max(alt), max(ref))
    ^~~~~~~~
```
[R/DEploidR.R:243:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L243) *style:* **Variable or function name should be snake_case.**
```r
histWSAF <- function ( obsWSAF, exclusive = TRUE,
^~~~~~~~
```
[R/DEploidR.R:243:24:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L243) *style:* **Variable or function name should be snake_case.**
```r
histWSAF <- function ( obsWSAF, exclusive = TRUE,
                       ^~~~~~~
```
[R/DEploidR.R:245:17:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L245) *style:* **Variable or function name should be snake_case.**
```r
                cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                ^~~~~~~
```
[R/DEploidR.R:245:30:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L245) *style:* **Variable or function name should be snake_case.**
```r
                cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                             ^~~~~~~~
```
[R/DEploidR.R:245:44:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L245) *style:* **Variable or function name should be snake_case.**
```r
                cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                           ^~~~~~~~
```
[R/DEploidR.R:246:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L246) *style:* **Variable or function name should be snake_case.**
```r
    tmpWSAFIndex <- 1:length(obsWSAF)
    ^~~~~~~~~~~~
```
[R/DEploidR.R:248:9:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L248) *style:* **Variable or function name should be snake_case.**
```r
        tmpWSAFIndex <- which( ( (obsWSAF < 1) * (obsWSAF > 0) ) == 1)
        ^~~~~~~~~~~~
```
[R/DEploidR.R:295:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L295) *style:* **Variable or function name should be snake_case.**
```r
plotWSAFvsPLAF <- function ( plaf, obsWSAF, expWSAF = c(),
^~~~~~~~~~~~~~
```
[R/DEploidR.R:295:36:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L295) *style:* **Variable or function name should be snake_case.**
```r
plotWSAFvsPLAF <- function ( plaf, obsWSAF, expWSAF = c(),
                                   ^~~~~~~
```
[R/DEploidR.R:295:45:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L295) *style:* **Variable or function name should be snake_case.**
```r
plotWSAFvsPLAF <- function ( plaf, obsWSAF, expWSAF = c(),
                                            ^~~~~~~
```
[R/DEploidR.R:297:23:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L297) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                      ^~~~~~~
```
[R/DEploidR.R:297:36:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L297) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                   ^~~~~~~~
```
[R/DEploidR.R:297:50:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L297) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                                 ^~~~~~~~
```
[R/DEploidR.R:336:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L336) *style:* **Variable or function name should be snake_case.**
```r
plotObsExpWSAF <- function (obsWSAF, expWSAF,
^~~~~~~~~~~~~~
```
[R/DEploidR.R:336:29:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L336) *style:* **Variable or function name should be snake_case.**
```r
plotObsExpWSAF <- function (obsWSAF, expWSAF,
                            ^~~~~~~
```
[R/DEploidR.R:336:38:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L336) *style:* **Variable or function name should be snake_case.**
```r
plotObsExpWSAF <- function (obsWSAF, expWSAF,
                                     ^~~~~~~
```
[R/DEploidR.R:338:23:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L338) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                      ^~~~~~~
```
[R/DEploidR.R:338:36:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L338) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                   ^~~~~~~~
```
[R/DEploidR.R:338:50:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L338) *style:* **Variable or function name should be snake_case.**
```r
                      cex.lab = 1, cex.main = 1, cex.axis = 1 ){
                                                 ^~~~~~~~
```
[R/DEploidR.R:374:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L374) *style:* **Variable or function name should be snake_case.**
```r
computeObsWSAF <- function (alt, ref) {
^~~~~~~~~~~~~~
```
[R/DEploidR.R:391:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L391) *style:* **Variable or function name should be snake_case.**
```r
haplotypePainter <- function (posteriorProbabilities, title = "", labelScaling){
^~~~~~~~~~~~~~~~
```
[R/DEploidR.R:391:31:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L391) *style:* **Variable or function name should be snake_case.**
```r
haplotypePainter <- function (posteriorProbabilities, title = "", labelScaling){
                              ^~~~~~~~~~~~~~~~~~~~~~
```
[R/DEploidR.R:391:67:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L391) *style:* **Variable or function name should be snake_case.**
```r
haplotypePainter <- function (posteriorProbabilities, title = "", labelScaling){
                                                                  ^~~~~~~~~~~~
```
[R/DEploidR.R:392:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/R/DEploidR.R#L392) *style:* **Variable or function name should be snake_case.**
```r
    rainbowColorBin <- 16
    ^~~~~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:3:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L3) *style:* **Variable or function name should be snake_case.**
```r
vcfFileName <- system.file("extdata", "PG0390-C.test.vcf.gz",
^~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:5:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L5) *style:* **Variable or function name should be snake_case.**
```r
plafFileName <- system.file("extdata", "labStrains.test.PLAF.txt",
^~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:7:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L7) *style:* **Variable or function name should be snake_case.**
```r
panelFileName <- system.file("extdata", "labStrains.test.panel.txt",
^~~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:9:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L9) *style:* **Variable or function name should be snake_case.**
```r
refFileName <- system.file("extdata", "PG0390-C.test.ref", package = "DEploid")
^~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:10:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L10) *style:* **Variable or function name should be snake_case.**
```r
altFileName <- system.file("extdata", "PG0390-C.test.alt", package = "DEploid")
^~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:12:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L12) *style:* **Variable or function name should be snake_case.**
```r
PG0390CoverageVcf <- extractCoverageFromVcf(vcfFileName)
^~~~~~~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:15:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L15) *style:* **Variable or function name should be snake_case.**
```r
PG0390Deconv <- dEploid(paste("-vcf", vcfFileName, "-plaf", plafFileName,
^~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:18:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L18) *style:* **Variable or function name should be snake_case.**
```r
expWSAF <- t(PG0390Deconv$Haps) %*% prop
^~~~~~~
```
[tests/testthat/test-DEploid_tools.R:21:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L21) *style:* **Variable or function name should be snake_case.**
```r
    PG0390CoverageTxt <- extractCoverageFromTxt(refFileName, altFileName)
    ^~~~~~~~~~~~~~~~~
```
[tests/testthat/test-DEploid_tools.R:44:5:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-DEploid_tools.R#L44) *style:* **Variable or function name should be snake_case.**
```r
    obsWSAF <- computeObsWSAF(PG0390CoverageVcf$altCount,
    ^~~~~~~
```
[tests/testthat/test-dEploid.R:3:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-dEploid.R#L3) *style:* **Variable or function name should be snake_case.**
```r
vcfFileName <- system.file("extdata", "PG0390-C.test.vcf.gz",
^~~~~~~~~~~
```
[tests/testthat/test-dEploid.R:5:1:](https://github.com/mcveanlab/DEploid-r/blob/be1f6f4ec2e294ba378d7e6286b6c1074dfa8317/tests/testthat/test-dEploid.R#L5) *style:* **Variable or function name should be snake_case.**
```r
plafFileName <- system.file("extdata", "labStrains.test.PLAF.txt",
^~~~~~~~~~~~
```


I think the same applies here.


FREE GOD


Definitely too man "..." here.


A zero comparison will compare true for both +/- 0, and that's what we want here.
We don't want an epsilon here because the case being checked for is when there is no angle at all, meaning the real part is the same as the magnitude r  (Param 0) exactly.  Even a small epsilon would make this not true.


Add radio stream and application core


use shlex.split(cmd) and shell=false


NaN and Inf are already handled, except for the case when r=+/-Inf and  theta=0, and polar returns an Infinity angle when we want a zero angle, which is what we're correcting for here.


Set the page_header parameter and pass it into the context, this will keep the headers consistent across the site. The page title also uses the page_header paramter. See base.html:48 and base-no-nav.html:12


ubuntu 16.10: for me this style isn't applied.