[R/helper_funs.R:2:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Runs model fitting, error estimation and variable importance on fold level
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:7:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
runfolds <- function(j = NULL, currentSample = NULL, data = NULL, formula = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:7:32:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L7) *style:* **Variable or function name should be snake_case.**
```r
runfolds <- function(j = NULL, currentSample = NULL, data = NULL, formula = NULL,
                               ^~~~~~~~~~~~~
```
[R/helper_funs.R:7:82:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
runfolds <- function(j = NULL, currentSample = NULL, data = NULL, formula = NULL,
                                                                                ^
```
[R/helper_funs.R:8:41:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L8) *style:* **Variable or function name should be snake_case.**
```r
                     model.args = NULL, par.cl = NULL, par.mode = NULL,
                                        ^~~~~~
```
[R/helper_funs.R:8:56:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L8) *style:* **Variable or function name should be snake_case.**
```r
                     model.args = NULL, par.cl = NULL, par.mode = NULL,
                                                       ^~~~~~~~
```
[R/helper_funs.R:9:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L9) *style:* **Variable or function name should be snake_case.**
```r
                     do.try = NULL, model.fun = NULL, error.fold = NULL,
                     ^~~~~~
```
[R/helper_funs.R:9:55:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L9) *style:* **Variable or function name should be snake_case.**
```r
                     do.try = NULL, model.fun = NULL, error.fold = NULL,
                                                      ^~~~~~~~~~
```
[R/helper_funs.R:9:73:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L9) *style:* **Trailing whitespace is superfluous.**
```r
                     do.try = NULL, model.fun = NULL, error.fold = NULL,
                                                                        ^
```
[R/helper_funs.R:10:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L10) *style:* **Variable or function name should be snake_case.**
```r
                     error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                     ^~~~~~~~~
```
[R/helper_funs.R:10:40:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L10) *style:* **Variable or function name should be snake_case.**
```r
                     error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                                       ^~~~~~~~
```
[R/helper_funs.R:10:57:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L10) *style:* **Variable or function name should be snake_case.**
```r
                     error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                                                        ^~~~~~~~~~~~~
```
[R/helper_funs.R:11:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L11) *style:* **Variable or function name should be snake_case.**
```r
                     imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                     ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:11:47:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L11) *style:* **Variable or function name should be snake_case.**
```r
                     imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                                              ^~~~~~~
```
[R/helper_funs.R:11:63:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L11) *style:* **Variable or function name should be snake_case.**
```r
                     imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                                                              ^~~~~~~~~
```
[R/helper_funs.R:12:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L12) *style:* **Variable or function name should be snake_case.**
```r
                     err.train = NULL, importance = NULL, currentRes = NULL,
                     ^~~~~~~~~
```
[R/helper_funs.R:12:59:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L12) *style:* **Variable or function name should be snake_case.**
```r
                     err.train = NULL, importance = NULL, currentRes = NULL,
                                                          ^~~~~~~~~~
```
[R/helper_funs.R:13:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L13) *style:* **Variable or function name should be snake_case.**
```r
                     currentImpo = NULL, pred.args = NULL, progress = NULL,
                     ^~~~~~~~~~~
```
[R/helper_funs.R:13:42:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L13) *style:* **Variable or function name should be snake_case.**
```r
                     currentImpo = NULL, pred.args = NULL, progress = NULL,
                                         ^~~~~~~~~
```
[R/helper_funs.R:13:76:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L13) *style:* **Trailing whitespace is superfluous.**
```r
                     currentImpo = NULL, pred.args = NULL, progress = NULL,
                                                                           ^
```
[R/helper_funs.R:14:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
                     pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:14:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L14) *style:* **Variable or function name should be snake_case.**
```r
                     pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                     ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:14:47:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L14) *style:* **Variable or function name should be snake_case.**
```r
                     pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                                              ^~~~~~~~~~~~~~~
```
[R/helper_funs.R:14:71:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L14) *style:* **Variable or function name should be snake_case.**
```r
                     pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                                                                      ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:15:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L15) *style:* **Lines should not be more than 80 characters.**
```r
                     response = NULL, is.factor.prediction = NULL, pooled.pred.test = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:15:68:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L15) *style:* **Variable or function name should be snake_case.**
```r
                     response = NULL, is.factor.prediction = NULL, pooled.pred.test = NULL,
                                                                   ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:16:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L16) *style:* **Lines should not be more than 80 characters.**
```r
                     coords = NULL, test.fun = NULL, imp.one.rep = NULL, i = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:16:37:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L16) *style:* **Variable or function name should be snake_case.**
```r
                     coords = NULL, test.fun = NULL, imp.one.rep = NULL, i = NULL,
                                    ^~~~~~~~
```
[R/helper_funs.R:16:54:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L16) *style:* **Variable or function name should be snake_case.**
```r
                     coords = NULL, test.fun = NULL, imp.one.rep = NULL, i = NULL,
                                                     ^~~~~~~~~~~
```
[R/helper_funs.R:17:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L17) *style:* **Variable or function name should be snake_case.**
```r
                     do.gc = NULL, test.param = NULL, train.param = NULL) {
                     ^~~~~
```
[R/helper_funs.R:17:36:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L17) *style:* **Variable or function name should be snake_case.**
```r
                     do.gc = NULL, test.param = NULL, train.param = NULL) {
                                   ^~~~~~~~~~
```
[R/helper_funs.R:17:55:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L17) *style:* **Variable or function name should be snake_case.**
```r
                     do.gc = NULL, test.param = NULL, train.param = NULL) {
                                                      ^~~~~~~~~~~
```
[R/helper_funs.R:17:75:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L17) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
                     do.gc = NULL, test.param = NULL, train.param = NULL) {
                                                                          ^
```
[R/helper_funs.R:17:76:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L17) *style:* **Trailing whitespace is superfluous.**
```r
                     do.gc = NULL, test.param = NULL, train.param = NULL) {
                                                                           ^
```
[R/helper_funs.R:19:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L19) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:20:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L20) *style:* **Lines should not be more than 80 characters.**
```r
    if (par.mode == "foreach" | par.mode == "sequential" | par.mode == "foreach-old" && progress == "TRUE" | progress == 1) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:24:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L24) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:29:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L29) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:32:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L32) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:34:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L34) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/helper_funs.R:36:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L36) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:39:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L39) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/helper_funs.R:42:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L42) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
      {
      ^
```
[R/helper_funs.R:44:9:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L44) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
        {
        ^
```
[R/helper_funs.R:51:9:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L51) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
        {
        ^
```
[R/helper_funs.R:59:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L59) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:61:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L61) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/helper_funs.R:64:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L64) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:69:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L69) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/helper_funs.R:70:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L70) *style:* **Variable or function name should be snake_case.**
```r
      pred.train <- do.call(predict, args = pargs)
      ^~~~~~~~~~
```
[R/helper_funs.R:72:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L72) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/helper_funs.R:73:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L73) *style:* **Variable or function name should be snake_case.**
```r
      pred.train <- do.call(pred.fun, args = pargs)
      ^~~~~~~~~~
```
[R/helper_funs.R:76:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L76) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:80:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L80) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
      {
      ^
```
[R/helper_funs.R:81:9:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L81) *style:* **Variable or function name should be snake_case.**
```r
        err.try <- try(err.fun(nd[, response], pred.train))
        ^~~~~~~
```
[R/helper_funs.R:83:11:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L83) *style:* **Variable or function name should be snake_case.**
```r
          err.try <- NULL
          ^~~~~~~
```
[R/helper_funs.R:87:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
        currentRes[[j]]$train <- err.fun(nd[, response], pred.train)  #res[[i]][[j]]$train = err.fun(nd[,response], pred.train)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:91:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L91) *style:* **Variable or function name should be snake_case.**
```r
      pooled.obs.train <- c(pooled.obs.train, nd[, response])
      ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:92:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L92) *style:* **Variable or function name should be snake_case.**
```r
      pooled.pred.train <- c(pooled.pred.train, pred.train)
      ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:99:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L99) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:107:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L107) *style:* **Variable or function name should be snake_case.**
```r
    nd.bak <- nd
    ^~~~~~
```
[R/helper_funs.R:112:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L112) *style:* **Variable or function name should be snake_case.**
```r
    pred.test <- do.call(predict, args = pargs)
    ^~~~~~~~~
```
[R/helper_funs.R:114:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L114) *style:* **Variable or function name should be snake_case.**
```r
    pred.test <- do.call(pred.fun, args = pargs)
    ^~~~~~~~~
```
[R/helper_funs.R:117:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L117) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:121:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L121) *style:* **Variable or function name should be snake_case.**
```r
      err.try <- try(err.fun(nd[, response], pred.test))
      ^~~~~~~
```
[R/helper_funs.R:123:9:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L123) *style:* **Variable or function name should be snake_case.**
```r
        err.try <- NULL
        ^~~~~~~
```
[R/helper_funs.R:127:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
      currentRes[[j]]$test <- err.fun(nd[, response], pred.test)  #res[[i]][[j]]$test  = err.fun(nd[,response], pred.test)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:131:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L131) *style:* **Variable or function name should be snake_case.**
```r
    pooled.obs.test <- c(pooled.obs.test, nd[, response])
    ^~~~~~~~~~~~~~~
```
[R/helper_funs.R:132:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L132) *style:* **Variable or function name should be snake_case.**
```r
    pooled.pred.test <- c(pooled.pred.test, pred.test)
    ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:136:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L136) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:148:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L148) *style:* **Variable or function name should be snake_case.**
```r
      imp.temp <- imp.one.rep
      ^~~~~~~~
```
[R/helper_funs.R:149:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L149) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/helper_funs.R:156:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L156) *style:* **Lines should not be more than 80 characters.**
```r
            cat(date(), "Repetition", names(currentSample)[i], "- Fold", j, "- permutation-count:", cnt, "\n")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:161:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L161) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/helper_funs.R:171:13:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L171) *style:* **Variable or function name should be snake_case.**
```r
            pred.test <- do.call(predict, args = pargs)
            ^~~~~~~~~
```
[R/helper_funs.R:173:13:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L173) *style:* **Variable or function name should be snake_case.**
```r
            pred.test <- do.call(pred.fun, args = pargs)
            ^~~~~~~~~
```
[R/helper_funs.R:176:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L176) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~~~
```
[R/helper_funs.R:179:13:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L179) *style:* **Variable or function name should be snake_case.**
```r
            permut.err <- try(err.fun(nd[, response], pred.test))
            ^~~~~~~~~~
```
[R/helper_funs.R:185:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L185) *style:* **Lines should not be more than 80 characters.**
```r
              # as.list( unlist(res[[i]][[j]]$test) - unlist(permut.err) ) (apply '-' to
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:186:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
              # corresponding list elements; only works if all list elements are scalars)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:189:13:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L189) *style:* **Variable or function name should be snake_case.**
```r
            permut.err <- err.fun(nd[, response], pred.test)
            ^~~~~~~~~~
```
[R/helper_funs.R:192:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L192) *style:* **Lines should not be more than 80 characters.**
```r
            # as.list( unlist(res[[i]][[j]]$test) - unlist(permut.err) ) (apply '-' to
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:193:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L193) *style:* **Lines should not be more than 80 characters.**
```r
            # corresponding list elements; only works if all list elements are scalars)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:198:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L198) *style:* **Lines should not be more than 80 characters.**
```r
      currentImpo[[j]] <- as.data.frame(t(sapply(imp.temp, function(y) sapply(as.data.frame(t(sapply(y,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:199:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L199) *style:* **Lines should not be more than 80 characters.**
```r
                                                                                as.data.frame))), function(x) mean(unlist(x))))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:203:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L203) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:204:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L204) *style:* **Variable or function name should be snake_case.**
```r
  currentRes <- currentRes[[j]]
  ^~~~~~~~~~
```
[R/helper_funs.R:205:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L205) *style:* **Variable or function name should be snake_case.**
```r
  currentImpo <- currentImpo[[j]]
  ^~~~~~~~~~~
```
[R/helper_funs.R:206:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L206) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:213:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L213) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:217:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L217) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Runs model fitting, error estimation and variable importance on fold level
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:223:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L223) *style:* **Variable or function name should be snake_case.**
```r
runreps <- function(currentSample = NULL, data = NULL, formula = NULL,
                    ^~~~~~~~~~~~~
```
[R/helper_funs.R:223:71:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L223) *style:* **Trailing whitespace is superfluous.**
```r
runreps <- function(currentSample = NULL, data = NULL, formula = NULL,
                                                                      ^
```
[R/helper_funs.R:224:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L224) *style:* **Lines should not be more than 80 characters.**
```r
                    model.args = NULL, par.cl = NULL, do.gc = NULL, imp.one.rep = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:224:40:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L224) *style:* **Variable or function name should be snake_case.**
```r
                    model.args = NULL, par.cl = NULL, do.gc = NULL, imp.one.rep = NULL,
                                       ^~~~~~
```
[R/helper_funs.R:224:55:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L224) *style:* **Variable or function name should be snake_case.**
```r
                    model.args = NULL, par.cl = NULL, do.gc = NULL, imp.one.rep = NULL,
                                                      ^~~~~
```
[R/helper_funs.R:224:69:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L224) *style:* **Variable or function name should be snake_case.**
```r
                    model.args = NULL, par.cl = NULL, do.gc = NULL, imp.one.rep = NULL,
                                                                    ^~~~~~~~~~~
```
[R/helper_funs.R:225:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L225) *style:* **Variable or function name should be snake_case.**
```r
                    do.try = NULL, model.fun = NULL, error.fold = NULL,
                    ^~~~~~
```
[R/helper_funs.R:225:54:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L225) *style:* **Variable or function name should be snake_case.**
```r
                    do.try = NULL, model.fun = NULL, error.fold = NULL,
                                                     ^~~~~~~~~~
```
[R/helper_funs.R:225:72:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L225) *style:* **Trailing whitespace is superfluous.**
```r
                    do.try = NULL, model.fun = NULL, error.fold = NULL,
                                                                       ^
```
[R/helper_funs.R:226:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L226) *style:* **Variable or function name should be snake_case.**
```r
                    error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                    ^~~~~~~~~
```
[R/helper_funs.R:226:39:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L226) *style:* **Variable or function name should be snake_case.**
```r
                    error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                                      ^~~~~~~~
```
[R/helper_funs.R:226:56:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L226) *style:* **Variable or function name should be snake_case.**
```r
                    error.rep = NULL, pred.fun = NULL, imp.variables = NULL,
                                                       ^~~~~~~~~~~~~
```
[R/helper_funs.R:227:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L227) *style:* **Variable or function name should be snake_case.**
```r
                    imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                    ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:227:46:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L227) *style:* **Variable or function name should be snake_case.**
```r
                    imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                                             ^~~~~~~
```
[R/helper_funs.R:227:62:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L227) *style:* **Variable or function name should be snake_case.**
```r
                    imp.permutations = NULL, err.fun = NULL, train.fun = NULL,
                                                             ^~~~~~~~~
```
[R/helper_funs.R:228:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L228) *style:* **Variable or function name should be snake_case.**
```r
                    err.train = NULL, importance = NULL, currentRes = NULL,
                    ^~~~~~~~~
```
[R/helper_funs.R:228:58:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L228) *style:* **Variable or function name should be snake_case.**
```r
                    err.train = NULL, importance = NULL, currentRes = NULL,
                                                         ^~~~~~~~~~
```
[R/helper_funs.R:229:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L229) *style:* **Variable or function name should be snake_case.**
```r
                    currentImpo = NULL, pred.args = NULL, progress = NULL,
                    ^~~~~~~~~~~
```
[R/helper_funs.R:229:41:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L229) *style:* **Variable or function name should be snake_case.**
```r
                    currentImpo = NULL, pred.args = NULL, progress = NULL,
                                        ^~~~~~~~~
```
[R/helper_funs.R:229:75:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L229) *style:* **Trailing whitespace is superfluous.**
```r
                    currentImpo = NULL, pred.args = NULL, progress = NULL,
                                                                          ^
```
[R/helper_funs.R:230:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L230) *style:* **Lines should not be more than 80 characters.**
```r
                    pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:230:21:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L230) *style:* **Variable or function name should be snake_case.**
```r
                    pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                    ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:230:46:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L230) *style:* **Variable or function name should be snake_case.**
```r
                    pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                                             ^~~~~~~~~~~~~~~
```
[R/helper_funs.R:230:70:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L230) *style:* **Variable or function name should be snake_case.**
```r
                    pooled.obs.train = NULL, pooled.obs.test = NULL, pooled.pred.train = NULL,
                                                                     ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:231:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L231) *style:* **Lines should not be more than 80 characters.**
```r
                    response = NULL, is.factor.prediction = NULL, pooled.pred.test = NULL,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:231:67:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L231) *style:* **Variable or function name should be snake_case.**
```r
                    response = NULL, is.factor.prediction = NULL, pooled.pred.test = NULL,
                                                                  ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:232:36:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L232) *style:* **Variable or function name should be snake_case.**
```r
                    coords = NULL, test.fun = NULL, par.mode = NULL, i = NULL) {
                                   ^~~~~~~~
```
[R/helper_funs.R:232:53:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L232) *style:* **Variable or function name should be snake_case.**
```r
                    coords = NULL, test.fun = NULL, par.mode = NULL, i = NULL) {
                                                    ^~~~~~~~
```
[R/helper_funs.R:234:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L234) *style:* **Variable or function name should be snake_case.**
```r
  currentRes <- NULL
  ^~~~~~~~~~
```
[R/helper_funs.R:235:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L235) *style:* **Variable or function name should be snake_case.**
```r
  currentImpo <- currentSample
  ^~~~~~~~~~~
```
[R/helper_funs.R:236:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L236) *style:* **Variable or function name should be snake_case.**
```r
  currentPooled.err <- NULL
  ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:237:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L237) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:239:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L239) *style:* **Variable or function name should be snake_case.**
```r
    currentRes <- lapply(currentSample, unclass)
    ^~~~~~~~~~
```
[R/helper_funs.R:242:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L242) *style:* **Variable or function name should be snake_case.**
```r
    currentRes <- NULL
    ^~~~~~~~~~
```
[R/helper_funs.R:244:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L244) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:247:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L247) *style:* **Variable or function name should be snake_case.**
```r
    pooled.obs.train <- pooled.pred.train <- c()
    ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:247:25:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L247) *style:* **Variable or function name should be snake_case.**
```r
    pooled.obs.train <- pooled.pred.train <- c()
                        ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:249:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L249) *style:* **Variable or function name should be snake_case.**
```r
  pooled.obs.test <- pooled.pred.test <- c()
  ^~~~~~~~~~~~~~~
```
[R/helper_funs.R:249:22:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L249) *style:* **Variable or function name should be snake_case.**
```r
  pooled.obs.test <- pooled.pred.test <- c()
                     ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:250:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L250) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:253:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L253) *style:* **Lines should not be more than 80 characters.**
```r
  # current sample arriving here has length of folds (because it it alsready indexed by
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:255:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L255) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:256:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L256) *style:* **Lines should not be more than 80 characters.**
```r
  # this ensures that runfolds finds all objects which have been defined until here
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:258:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L258) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:259:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L259) *style:* **Lines should not be more than 80 characters.**
```r
  if (par.mode == "foreach" | par.mode == "sequential" && progress == TRUE | progress == 2) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:262:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L262) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:263:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L263) *style:* **Lines should not be more than 80 characters.**
```r
  runfolds_list <- map(seq_along(currentSample), function(rep) runfolds(j = rep, data = data, currentSample = currentSample,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:264:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L264) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        formula = formula, par.mode = par.mode, pred.fun = pred.fun,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:265:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L265) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        model.args = model.args, do.try = do.try, model.fun = model.fun,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:266:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L266) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        error.fold = error.fold, error.rep = error.rep, imp.permutations = imp.permutations,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:266:157:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L266) *style:* **Trailing whitespace is superfluous.**
```r
                                                                        error.fold = error.fold, error.rep = error.rep, imp.permutations = imp.permutations,
                                                                                ^
```
[R/helper_funs.R:267:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L267) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        imp.variables = imp.variables, is.factor.prediction = is.factor.prediction,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:268:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L268) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        err.train = err.train, importance = importance, currentRes = currentRes,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:268:145:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L268) *style:* **Trailing whitespace is superfluous.**
```r
                                                                        err.train = err.train, importance = importance, currentRes = currentRes,
                                                                                ^
```
[R/helper_funs.R:269:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L269) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        pred.args = pred.args, response = response, par.cl = par.cl,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:269:133:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L269) *style:* **Trailing whitespace is superfluous.**
```r
                                                                        pred.args = pred.args, response = response, par.cl = par.cl,
                                                                                ^
```
[R/helper_funs.R:270:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L270) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        coords = coords, progress = progress, pooled.obs.train = pooled.obs.train,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:270:147:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L270) *style:* **Trailing whitespace is superfluous.**
```r
                                                                        coords = coords, progress = progress, pooled.obs.train = pooled.obs.train,
                                                                                ^
```
[R/helper_funs.R:271:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L271) *style:* **Lines should not be more than 80 characters.**
```r
                                                                        pooled.obs.test = pooled.obs.test, err.fun = err.fun))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:272:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L272) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:274:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L274) *style:* **Lines should not be more than 80 characters.**
```r
  # http://stackoverflow.com/questions/32557131/adding-a-vector-to-each-sublist-within-a-list-r
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:275:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L275) *style:* **Lines should not be more than 80 characters.**
```r
  # http://stackoverflow.com/questions/43963683/r-flexible-passing-of-sublists-to-following-function
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:277:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L277) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:281:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L281) *style:* **Lines should not be more than 80 characters.**
```r
    ### get mean from all impo results of all folds (multiple dataframes stored in a list)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:282:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L282) *style:* **Lines should not be more than 80 characters.**
```r
    ### http://stackoverflow.com/questions/18371187/element-wise-mean-for-a-list-of-dataframes-with-na
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:286:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L286) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:287:41:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L287) *style:* **Trailing whitespace is superfluous.**
```r
  pooled_only <- runfolds_merged[c(1:4)]
                                        ^
```
[R/helper_funs.R:288:64:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L288) *style:* **Trailing whitespace is superfluous.**
```r
  pooled_only <- sapply(unique(names(pooled_only)), function(x)
                                                               ^
```
[R/helper_funs.R:289:76:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L289) *style:* **Trailing whitespace is superfluous.**
```r
    unname(unlist(pooled_only[names(pooled_only) == x])), simplify = FALSE)
                                                                           ^~~
```
[R/helper_funs.R:290:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L290) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:292:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L292) *style:* **Lines should not be more than 80 characters.**
```r
  # Put the results from the pooled estimation into the pooled.err data structure:
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:297:46:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L297) *style:* **Trailing whitespace is superfluous.**
```r
        lev[pooled_only$pooled.obs.train] %>%
                                             ^
```
[R/helper_funs.R:299:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L299) *style:* **Lines should not be more than 80 characters.**
```r
        # pooled_only$pooled.obs.train <- factor(lev[pooled_only$pooled.obs.train], levels = lev)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:301:43:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L301) *style:* **Trailing whitespace is superfluous.**
```r
      lev[pooled_only$pooled.obs.test] %>%
                                          ^
```
[R/helper_funs.R:303:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L303) *style:* **Lines should not be more than 80 characters.**
```r
      # pooled_only$pooled.obs.test <- factor(lev[pooled_only$pooled.obs.test], levels = lev)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:306:49:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L306) *style:* **Trailing whitespace is superfluous.**
```r
          lev[pooled_only$pooled.pred.train] %>%
                                                ^
```
[R/helper_funs.R:308:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L308) *style:* **Lines should not be more than 80 characters.**
```r
          # pooled_only$pooled.pred.train <- factor(lev[pooled_only$pooled.pred.train], levels = lev)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:310:45:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L310) *style:* **Trailing whitespace is superfluous.**
```r
        lev[pooled_only$pooled.obs.test] %>%
                                            ^
```
[R/helper_funs.R:312:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L312) *style:* **Lines should not be more than 80 characters.**
```r
        # pooled_only$pooled.pred.test <- factor(lev[pooled_only$pooled.pred.test], levels = lev)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:314:6:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L314) *style:* **Trailing whitespace is superfluous.**
```r
    }
     ^
```
[R/helper_funs.R:315:5:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L315) *style:* **Variable or function name should be snake_case.**
```r
    pooled.err.train <- NULL
    ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:317:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L317) *style:* **Lines should not be more than 80 characters.**
```r
      pooled.err.train <- err.fun(pooled_only$pooled.obs.train, pooled_only$pooled.pred.train)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:317:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L317) *style:* **Variable or function name should be snake_case.**
```r
      pooled.err.train <- err.fun(pooled_only$pooled.obs.train, pooled_only$pooled.pred.train)
      ^~~~~~~~~~~~~~~~
```
[R/helper_funs.R:319:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L319) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:321:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L321) *style:* **Lines should not be more than 80 characters.**
```r
                                                  pooled_only$pooled.pred.test)) %>%
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:321:85:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L321) *style:* **Trailing whitespace is superfluous.**
```r
                                                  pooled_only$pooled.pred.test)) %>%
                                                                                ^
```
[R/helper_funs.R:322:19:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L322) *style:* **Trailing whitespace is superfluous.**
```r
      unlist() %>%
                  ^
```
[R/helper_funs.R:323:14:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L323) *style:* **Variable or function name should be snake_case.**
```r
      t() -> currentPooled.err
             ^~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:324:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L324) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/helper_funs.R:329:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L329) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:330:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L330) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if ((do.gc >= 1) & (do.gc < 2)) {
      ^
```
[R/helper_funs.R:333:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L333) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:334:79:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L334) *style:* **Trailing whitespace is superfluous.**
```r
  # set currentImpo to NULL to prevent false importance output (resamp object)
                                                                              ^
```
[R/helper_funs.R:335:19:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L335) *style:* **Trailing whitespace is superfluous.**
```r
  # if not desired
                  ^
```
[R/helper_funs.R:339:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L339) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:340:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L340) *style:* **Lines should not be more than 80 characters.**
```r
  #return(list(error = currentRes, pooled.error = currentPooled.err, importance = currentImpo))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:341:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L341) *style:* **Lines should not be more than 80 characters.**
```r
  return(list(error = runfolds_merged$currentRes, pooled.error = currentPooled.err, importance = impo_only))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helper_funs.R:349:38:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L349) *style:* **Variable or function name should be snake_case.**
```r
transfer_parallel_output <- function(myRes = NULL, res = NULL, impo = NULL,
                                     ^~~~~
```
[R/helper_funs.R:350:38:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L350) *style:* **Variable or function name should be snake_case.**
```r
                                     pooled.err = NULL) {
                                     ^~~~~~~~~~
```
[R/helper_funs.R:351:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L351) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/helper_funs.R:354:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L354) *style:* **Variable or function name should be snake_case.**
```r
      pooled.err <- myRes[[i]]$pooled.error
      ^~~~~~~~~~
```
[R/helper_funs.R:358:7:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L358) *style:* **Variable or function name should be snake_case.**
```r
      pooled.err <- rbind(pooled.err, myRes[[i]]$pooled.error)
      ^~~~~~~~~~
```
[R/helper_funs.R:363:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/helper_funs.R#L363) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/resample.R:3:61:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L3) *style:* **Trailing whitespace is superfluous.**
```r
#' `resample.strat.uniform` draws a stratified random sample
                                                            ^
```
[R/resample.R:4:61:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L4) *style:* **Trailing whitespace is superfluous.**
```r
#' (with or without replacement) from the samples in `data`.
                                                            ^
```
[R/resample.R:5:65:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L5) *style:* **Trailing whitespace is superfluous.**
```r
#' Stratification is over the levels of `data[,param$response]`.
                                                                ^
```
[R/resample.R:7:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/resample.R:9:72:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L9) *style:* **Trailing whitespace is superfluous.**
```r
#' @param param a list with the following components: `strat` is either
                                                                       ^
```
[R/resample.R:11:64:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L11) *style:* **Trailing whitespace is superfluous.**
```r
#'  levels, or a vector of type factor and length `nrow(data)`;
                                                               ^
```
[R/resample.R:12:65:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
#'  `n` is a numeric value specifying the size of the subsample;
                                                                ^
```
[R/resample.R:14:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L14) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^~
```
[R/resample.R:16:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L16) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/resample.R:17:58:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L17) *style:* **Trailing whitespace is superfluous.**
```r
#' @details If `param$replace=FALSE`, a subsample of size
                                                         ^
```
[R/resample.R:18:56:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L18) *style:* **Trailing whitespace is superfluous.**
```r
#' `min(param$n,nrow(data))` will be drawn from `data`.
                                                       ^
```
[R/resample.R:20:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L20) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/resample.R:22:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L22) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/resample.R:25:40:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L25) *style:* **Trailing whitespace is superfluous.**
```r
#' d <- resample.strat.uniform(ecuador,
                                       ^
```
[R/resample.R:29:3:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L29) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/resample.R:31:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L31) *style:* **Lines should not be more than 80 characters.**
```r
resample.strat.uniform <- function(data, param = list(strat = "class", nstrat = Inf,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/resample.R:31:1:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L31) *style:* **Variable or function name should be snake_case.**
```r
resample.strat.uniform <- function(data, param = list(strat = "class", nstrat = Inf,
^~~~~~~~~~~~~~~~~~~~~~
```
[R/resample.R:31:85:](https://github.com/pat-s/sperrorest/blob/e9d17cfc67629ffcfdf369b32ccbb233f7d4c712/R/resample.R#L31) *style:* **Trailing whitespace is superfluous.**
```r
resample.strat.uniform <- function(data, param = list(strat = "class", nstrat = Inf,
                                                                                ^
```


@ggerges Wasn't me this time who made it


@caitlynmei Get your team in order


Yes, seems underscore is forbidden by the `uts46` library. I'm pinging Nick to see if that is intentional. If so, I will remove it from the regex.

Thanks! Quick discovery! :)


Hi @happynoom , do you think you could add save and load model features?


np.  thank you for making this repo!


Thanks :-)


@NayaraCaetano Aqui


@yungsters I'm curious if the audio file needs to meet certain conditions for Chrome to consider it?

The example wav file from Mathias Bynens collection of small files is waaay smaller, but maybe Chrome has heuristics to ignore it:

https://github.com/mathiasbynens/small/blob/master/wav.wav


Nice secret password, might wanna hide that :D


The case you grouchy up seems rare so we should of revert this change. Bold without a corresponding txt- rule shouldn't happen


+ git ignore


@deoel
@VirgoBBK
Validation universelle des numéros de téléphone!


`echo config.py > .gitignore`


do you have any idea what youre doing


Hello, Siim.
Thanks again for your comments, they were useful.
Also can I ask for feedback to the Assignment2, I just posted it on github.
Sorry for being late - it was a little bit harder than I expected :)
(
https://github.com/yarynapavlyshyn/CodeU-Group8/tree/Assignment2/Assignment2-Ancestors
)

Thanks,
Yaryna

2017-05-24 13:06 GMT+03:00 Siim Põder <notifications@github.com>:

> There are tools that automatically generate code documentation that might
> care about the formatting of the docstrings.
>
> I'm not familiar with literature about documentation style unfortunately.
> Your choice of a single sentence for these API methods feels appropriate as
> they implement a common data structure most developers would be familiar
> with anyway.
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/yarynapavlyshyn/CodeU-Group8/commit/54553390b2ce1714f0059e446133c42571785d02#commitcomment-22260522>,
> or mute the thread
> <https://github.com/notifications/unsubscribe-auth/AVrRBgXfo53-PaZOhvc3-ja_RidI2LfJks5r9AEcgaJpZM4NiS7R>
> .
>


測試東西XD