Bluemix [toolchain](https://console-regional.ng.bluemix.net/devops/toolchains/ff6da71c-d2e8-4cb8-b813-96f7b2deb787 "giftback"): [Delivery Pipeline](https://console-regional.ng.bluemix.net/devops/pipelines/88102992-ebcb-4336-8fbe-00c8d895357e "giftbackv2") deployed [giftbackv2](https://github.com/apbram/giftbackv2/releases/tag/deploy-ibm-yp-us-south-apbram-br.ibm.com-giftback-20170815-145917 "deploy-ibm-yp-us-south-apbram-br.ibm.com-giftback-20170815-145917") to [giftback](https://console.bluemix.net/apps/c5a10dbb-20af-40d2-89b8-b5c6411c934d?env_id=ibm:yp:us-south "ibm:yp:us-south:apbram@br.ibm.com:giftback"), including this commit


@fedorov Thanks, yes, the DCMTK team is aware of the patch: https://github.com/msmolens/DCMTK/commit/c9ccd45212cb542d78201995951fbcfb416f8b16#commitcomment-23467725


(Jan is responsible for the related code and returns from vacaction next week AFAIK)


aes jut


When does such a warning ever occur?

The configure script defines NEED_WAIT_H through `config.h` which is included in `elvis.h` then.


@KrasnayaPloshchad Yes, I'll do that.


the old code doesn't have this, alright.

I am more and more convinced the reports for this "issue" are broken setups...


Centralized the star 'n shadows on screen.


Bluemix [toolchain](https://console-regional.ng.bluemix.net/devops/toolchains/c8154cd8-c2b5-4cbe-89a8-e628927d1d03 "trainingcenter"): [Delivery Pipeline](https://console-regional.ng.bluemix.net/devops/pipelines/1141e169-ba6b-4680-b34f-5e957351087b "trainingcenter") deployed [trainingcenter](https://github.com/pyuriko/trainingcenter/releases/tag/deploy-ibm-yp-us-south-PYURIKO-BR.IBM.COM-dev-20170815-150114 "deploy-ibm-yp-us-south-PYURIKO-BR.IBM.COM-dev-20170815-150114") to [dev](https://console.bluemix.net/apps/974ab3ab-bdb2-46a6-af21-cefb269de4f3?env_id=ibm:yp:us-south "ibm:yp:us-south:PYURIKO@BR.IBM.COM:dev"), including this commit


Bluemix [toolchain](https://console-regional.ng.bluemix.net/devops/toolchains/ff6da71c-d2e8-4cb8-b813-96f7b2deb787 "giftback"): [Delivery Pipeline](https://console-regional.ng.bluemix.net/devops/pipelines/88102992-ebcb-4336-8fbe-00c8d895357e "giftbackv2") deployed [giftbackv2](https://github.com/apbram/giftbackv2/releases/tag/deploy-ibm-yp-us-south-apbram-br.ibm.com-giftback-20170815-150128 "deploy-ibm-yp-us-south-apbram-br.ibm.com-giftback-20170815-150128") to [giftback](https://console.bluemix.net/apps/031d02ea-f2aa-44d6-a82f-26032ae6b4d2?env_id=ibm:yp:us-south "ibm:yp:us-south:apbram@br.ibm.com:giftback"), including this commit


немножечко потек


Beyond1Airloop (mjwitte) - x86_64-Linux-Ubuntu-14.04-cppcheck-1.61: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


а здесь вообще водопад


It appears that this change is not necessary? And it causes error during deployment.


We don’t use this functionality anymore from the shell, so I believe this can be dropped.


👍

@jcfr please let me know how you want to proceed. I would like to update DCMTK to this commit: http://git.dcmtk.org/?p=dcmtk.git;a=commit;h=998058d4b1bff1066beb5caa01a90f7476ab8f34. Will you rebase this patched branch?


Not a problem at all! Hope it helps.


TeamCity Chorus :: chorus-linux64-master Continuous [Build 3.0.9.90203e48c9c4c54e7aa08e1a2a5fbc4569a2738e](http://build.palaso.org/viewLog.html?buildId=96081&buildTypeId=Chorus_Linux64masterContinuous) outcome was **SUCCESS**
Summary: Tests passed: 938, ignored: 57 Build time: 00:14:29


Mapa de localização do Teatro Stoep


Otkud ova migracija?


Takodje i za ovu, zasto si pravio ovu migraciju?


* admin/adm_add.php & adm_edit.php & adm_mxaccount.php & adm_slavedns.php

On récupère la complexité du mdp qu'on doit générer que l'on va passer en paramètre de la fonction display_div_generate_password
```
$c=$admin->listPasswordPolicies();
$passwd_classcount = $c['pop']['classcount'];
```

* classes/m_admin.php

1 - Ajout de la fonction alternc_password_policy
Afin d'avoir une politique de mdp pour la section admin.

2 - Fonction checkPolicy
Elle a un pramètre en plus ($canbeempty) qui permet d'autoriser ou non un mdp vide

3 - J'ai changé l'appel à $dom->hook_admin_del_member vers  $dom->admin_del_member
Ce n'est plus vraiment un hook vu qu'on doit l'appeler directement et le fait de l'appeler 2 fois de suite ne peut qu'attirer des problèmes plus tard.

Dans la classe m_dom.php, j'ai renommé la fonction.


ovo //end na kraju metode i //CLASS na kraju klase je l ti sam dopisujes ili nesto drugo?


I suspect that if you use the global instead of `require('sails')`, it would solve the problem here.  Alternatively, if you'd rather use `require('sails')`, I think if you moved it inside your function(s) in the place(s) where you need it, it should avoid the race condition during load.

We're still looking into this regardless to see if we can make the behavior nicer-- thanks for the heads up!


TeamCity Chorus :: chorus-win32-master Continuous [Build 3.0.11.90203e48c9c4c54e7aa08e1a2a5fbc4569a2738e](http://build.palaso.org/viewLog.html?buildId=96082&buildTypeId=Chorus_Win32masterContinuous) outcome was **SUCCESS**
Summary: Tests passed: 950, ignored: 51 Build time: 00:27:57


need pull


I think this line causes this issue:

[ylecuyer@archlinux jruby]$ ./bin/jruby --version
jruby 9.2.0.0-SNAPSHOT (2.4.1) 2017-08-15 158574d OpenJDK 64-Bit Server VM 25.144-b01 on 1.8.0_144-b01 +jit [linux-x86_64]
[ylecuyer@archlinux jruby]$ ./bin/jruby -e "puts 1.floor(2)"
1.0

Ruby doc says it should return 1

https://ruby-doc.org/core-2.4.0/Integer.html#method-i-floor
1.floor(2)        #=> 1

This bug is also present in MRI

[yle[ylecuyer@archlinux jruby]$ ruby --version
ruby 2.4.1p111 (2017-03-22 revision 58053) [x86_64-linux]
cuyer@archlinux jruby]$ ruby -e "puts 1.floor(2)"
1.0


Hi! I lost password Bitcoin wallet ABC cash. How to recover the password from wallet.ABC Bitcoin version v0.14.6.0-a46e63c (64-bit) Please help!


Do we have a `Natural` space?  That would be even better.


@alonlevih The option you were looking for was just above the one you added :)


minValue and maxValue and minStep in setProps should be validated too


Synchronous Javascript allows you to build procedures which run synchronous and await the completion of io-operations or timers.


I like the direction you're taking the new branches. It matches the kind of thing that was in my head.


Beyond1Airloop (mjwitte) - x86_64-MacOS-10.9-clang: OK (2574 of 2575 tests passed, 599 test warnings)

Messages:

 * 599 tests had: AUD diffs.
 * 525 tests had: BND diffs.
 * 1 test had: ERR diffs.
 * 2 tests had: RDD diffs.

Failures:

integration Test Summary
 * Passed: 601
 * Failed: 1

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.96%25-yellow.png)


Local to the event listener


@AdSchellevis ok for 17.7.1? will not change the default, helps with targeted migration of plugin models...


This code does not work; there must be a space between the * and the name.


Envelope может лежать в западном полушарии (все координаты отрицательные) или только по Х отрицательные - тут получится присвоение 0.0 что неверно


Аналогично про южное полушарие


You're right. That should have not been merged. Undoing it now.


as you correct the value in the validation method, uint should be Math.abs too and why not parseInt the integer, parseFloat the floats too ?


Spacer for wheels.


This commit has been mentioned on **Discourse Meta**. There might be relevant details there:

https://meta.discourse.org/t/incorrect-or-failing-oneboxes-for-links-to-other-discourse-instances/67351/20


Nisam siguran da ce ovo da radi... Mislim na potvrdu lozinke. Pogledaj ovo: https://laravel.com/docs/5.4/validation#rule-confirmed


This seems out of place, is it referring to the above table?


Make this into a section?


Nemoj ubacivati bespotrebne nove redove.


Not sure I'd start out with this, confusing for average users.


wtf github


Bespotreban novi red


Ispod public function nema potreba da bude prazan red, odmah je viticasta zagrada


При повороте координаты буду уходить за видимые границы экрана - такое сравнение неверное - в результате будет все обрезано по границам экрана


here is how i sanitize the values in my plugin :

`
// -- sanitizeValue
// -- Desc : limit the value to the min and max characteristic + round the float to the same precision than the minStep
// -- Params --
// -- currentValue : value to prepare
// -- characteristic : characteristic containing the props
// -- Return : prepared value
function sanitizeValue(currentValue,characteristic) {
	let val=0;
	if(!characteristic) // just return the value if no characteristic
		return val;
	else
		if(!characteristic.props)
			return val;
		else
			if(!characteristic.props.format)
				return val;

	switch(characteristic.props.format) {
			case "uint8" :
			case "uint16":
			case "uint32" :
			case "uint64" :
				val = parseInt(currentValue);
				val = Math.abs(val); // unsigned
				if(!val) val = 0;
				if(characteristic.props.minValue != null && characteristic.props.minValue != undefined && val < parseInt(characteristic.props.minValue)) val = parseInt(characteristic.props.minValue);
				if(characteristic.props.maxValue != null && characteristic.props.maxValue != undefined && val > parseInt(characteristic.props.maxValue)) val = parseInt(characteristic.props.maxValue);
			break;
			case "int" :
				val = parseInt(currentValue);
				if(!val) val = 0;
				if(characteristic.props.minValue != null && characteristic.props.minValue != undefined && val < parseInt(characteristic.props.minValue)) val = parseInt(characteristic.props.minValue);
				if(characteristic.props.maxValue != null && characteristic.props.maxValue != undefined && val > parseInt(characteristic.props.maxValue)) val = parseInt(characteristic.props.maxValue);
			break;
			case "float" :
				val = minStepRound(parseFloat(currentValue),characteristic);
				if(!val) val = 0.0;
				if(characteristic.props.minValue != null && characteristic.props.minValue != undefined && val < parseFloat(characteristic.props.minValue)) val = parseFloat(characteristic.props.minValue);
				if(characteristic.props.maxValue != null && characteristic.props.maxValue != undefined && val > parseFloat(characteristic.props.maxValue)) val = parseFloat(characteristic.props.maxValue);
			break;
			case "bool" :
				val = toBool(currentValue);
				if(!val) val = false;
			break;
			case "string" :
			case "tlv8" :
				val = currentValue.toString();
				if(!val) val = '';
			break;
	}
	return val;
}

// -- minStepRound
// -- Desc : round the value to the same precision than the minStep
// -- Params --
// -- val : value to round
// -- characteristic : characteristic containing the props
// -- Return : rounded value
function minStepRound(val,characteristic) {
	if(characteristic.props.minStep == null || characteristic.props.minStep == undefined) {
		characteristic.props.minStep = 1;
	}
	let prec = (characteristic.props.minStep.toString().split('.')[1] || []).length;
	if(val) {
		val = val * Math.pow(10, prec);
		val = Math.round(val); // round to the minStep precision
		val = val / Math.pow(10, prec);
	}
	return val;
}

// -- toBool
// -- Desc : transform to boolean a value
// -- Params --
// -- value : value to convert into boolean
// -- Return : boolean value
function toBool(val) {
	if (val == 'false' || val == '0') {
		return false;
	} else {
		return Boolean(val);
	}
}
`


Аналогично по Y


This isn't very idiomatic, though totally correct. I'd do it like so:

```js
const words = (await bertha.get('1o3kjPOvWCpyHWtBhCd9hTt9KMqus-85CXOHOdO0o1UA', ['words'], { republish: true }))
  .words
  .map(d => [d.matchword, d.ftstyle]);
```


Maybe add a link somewhere to https://lbry.io/faq/claimtrie-implementation for more details about takeover/claims?


:+1: Thanks!


It works well with atom, and I think these packages should make it "just work"
```
├── linter@2.2.0
├── linter-eslint@8.2.1
├── linter-ui-default@1.6.1
```
I'm planning to update the eslint rules - i'll try and do this asap (#419)


@samthor Thank you!  Safari 9 is also affected by this.  The patch solves the issue.


I believe it is important to tell the truth. It clears the soul, calms the mind, and balances karma.

Before I die in this life it is my goal to find calmness, peace, and resolve in every relationship I've had in life, with children, co-workers, partners, family, friends. It is part of me clearing my karma, and also my efforts to build a better world, one interaction at a time. It all starts at home. World peace starts with each individual.

And yes, injustice, and pain, leave a scar on the mind, heart, and psyche. I, personally, do not want to be the person that leaves scars on someone else. And I'm willing to do the karmic work to promote healing, if I have inflicted pain on a person. I don't run away and hide. I face the truth.


Beyond1Airloop (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-UnitTestsCoverage-Debug: OK (1373 of 1373 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-39.2%25-green.png)


You should probably wrap this in a `try/catch` block in case the request fails.


@kevva Just so you know, `buffer-alloc` will use the underlying `Buffer.alloc` if available, as to not print a deprecation warning. ref: https://github.com/LinusU/buffer-alloc/blob/63be376c5c7a27c3e6b7b628409fe4cbc34be5f4/index.js#L13-L14

Although using the `buffer-alloc` package will run som additional input validation that was added in Node.js 8 (I believe), even on Node.js 4.5 e.g. ref: https://github.com/LinusU/buffer-alloc/blob/63be376c5c7a27c3e6b7b628409fe4cbc34be5f4/index.js#L5-L11


Hi


Created multidev environment [sci-base#pr-aug](https://dashboard.pantheon.io/sites/31ca4f16-019a-4433-8326-6b6a4dd462ee#pr-aug).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-aug-sci-base.pantheonsite.io/)


You might also want to wrap the last two lines in a try/catch to prevent errors from getting swallowed. If the parent function is wrapped in a try/catch you can probably just do something like `catch(e) { throw e; }` to throw the error up the stack.


nb


Created multidev environment [dneedham-texascamp-2017-training#pr-ctools-m](https://dashboard.pantheon.io/sites/1e146671-908e-4bb3-8c59-a019eca02d88#pr-ctools-m).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-ctools-m-dneedham-texascamp-2017-training.pantheonsite.io/)


As it was, Scalac thought there were missing cases.  Perhaps a default case to appease it, then.


@apieceofbart zrobiłem te 2 małe zadanka z tablicami. Z graczami NBA jestem na etapie 2/6


This also references Issue #25.


Hi @stanleyhuangyc , do you have some code snipped to understand how to use the touch API in code?


I'll add the annotation which suppresses the warning.


@scribblemaniac Could it be better (smoother) to say: 'I am member of special forces!"? I ean "agent" can be special. ^__^


update


149678381_Issue#6220 (Nigusse) - i386-Windows-7-VisualStudio-14: OK (2580 of 2581 tests passed, 0 test warnings)

Failures:

EnergyPlusFixture Test Summary
 * Passed: 502
 * Failed: 1

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.96%25-yellow.png)


[R/internal-yaml.R:51:18:](https://github.com/hbc/bcbioRnaseq/blob/eab0e199fa2244a0b5a013c5ac29b2c9ae53fe38/R/internal-yaml.R#L51) *style:* **`%>%` should always have a space before it and a new line after it, unless the full pipeline fits on one line.**
```r
        nested %>% camel %>% .[unique(names(.))]
               ~~^
```


@MartijnHols
Is this supposed to be here?
[![Screenshot from Gyazo](https://gyazo.com/e581365616fc9c742f722d8dedfb9a62/raw)](https://gyazo.com/e581365616fc9c742f722d8dedfb9a62)


@scribblemaniac Can we make this shorter somehow? Like "Just don't!". It should be some kind of forbidding phrase...


You're finally using tmux


BoilerSteamIDD (mitchute) - x86_64-MacOS-10.9-clang: OK (2574 of 2576 tests passed, 3 test warnings)

Messages:

 * 5 tests had: AUD diffs.
 * 5 tests had: ERR diffs.
 * 2 tests had: Table small diffs.
 * 2 tests had: Table big diffs.

Failures:

regression Test Summary
 * Passed: 598
 * Failed: 2

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.92%25-yellow.png)


Yeah, this works 👍


Klasse Arbeit


ok


@MartijnHols The low health healing tab was removed in this change for the resto druid module.


全英文看不懂，有待学习呀


Why?


thx


They are all the commented urls :upside_down_face:


It would be good to resolve this WHAT THE HECK.


You asked me. I didn't know which lrc part you meant, so put it here too. I can remove


can I make any changes in here?


Attempting to change the type of the above chunks still results in the error screenshotted in Issue #356.


Created multidev environment [sci-base#ci-21](https://dashboard.pantheon.io/sites/31ca4f16-019a-4433-8326-6b6a4dd462ee#ci-21).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-21-sci-base.pantheonsite.io/)


Ok, `WorkerSpec` should use test constants.


nice idea. I will have to write ugly signature explicitly


I think keeping the [1024]byte is a better idea. Why would you want an allocation (especially in C)


oh, it's my fault, I forgot to fix it. sorry


第三天


@koppor Can the snap folder go under /buildres/snap? Why an additional gitignore?


Space updated in commit b23ace4.


Reviewed and approved changes


remove spellstate, just use name... spellstate seems broken


These should be consts and probably not global. I would move them into safeString


This is code I don't plan on including, but I just pushed for historical purposes.


@clalancette has this branch been audited ? (to know if we should keep it around or not)


@tnut
Je pense qu'il manque cairo comme dépendance .
J'ai du rajouter --disable-documentation à ./configure pour compiler le paquet


@MaVo159
This is one controllable allocation per 1 asset access, not a big overhead.
Let's see if that code works, then replace back with `[1024]byte` when enough tests will be available.


See comment at allocation. This shouldn't be necessary and free could also be removed. Go array or slice are fine. Otherwise you need should import stdlib.h


[inst/extdata/test_retinas/3hgbqg/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L4) *style:* **Lines should not be more than 80 characters.**
```r
  LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/3hgbqg/main.r:4:3:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
  LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
  ^~~~~~~~~~
```
[inst/extdata/test_retinas/3hgbqg/main.r:5:3:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L5) *style:* **Variable or function name should be snake_case.**
```r
  RESOLUTION_var <- 500 #Plot width in pixels
  ^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/3hgbqg/main.r:9:3:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L9) *style:* **Variable or function name should be snake_case.**
```r
  IJ <-data.frame(maxX = 1429,
  ^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:9:6:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L9) *style:* **Put spaces around all infix operators.**
```r
  IJ <-data.frame(maxX = 1429,
     ^~~
```
[inst/extdata/test_retinas/3hgbqg/main.r:13:33:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                  deltaX = (1429-108)/21,
                               ~^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:13:38:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                  deltaX = (1429-108)/21,
                                    ~^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:14:32:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L14) *style:* **Put spaces around all infix operators.**
```r
                  deltaY = (989-85)/14)
                              ~^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:14:36:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L14) *style:* **Put spaces around all infix operators.**
```r
                  deltaY = (989-85)/14)
                                  ~^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:26:23:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L26) *style:* **Commas should never have a space before.**
```r
          height = 30 ,# height of the counting frame in microns
                     ~^
```
[inst/extdata/test_retinas/3hgbqg/main.r:26:24:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L26) *style:* **Commas should always have a space after.**
```r
          height = 30 ,# height of the counting frame in microns
                       ^
```
[inst/extdata/test_retinas/3hgbqg/main.r:31:30:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L31) *style:* **Commas should never have a space before.**
```r
          extrapolate = TRUE ,          #Predicts densities to the equator.
                            ~^
```
[inst/extdata/test_retinas/3hgbqg/main.r:33:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L33) *style:* **Lines should not be more than 80 characters.**
```r
          rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/3hgbqg/main.r:34:24:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
          plot_suppress=TRUE,
                      ~^~
```
[inst/extdata/test_retinas/3hgbqg/main.r:41:3:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/3hgbqg/main.r#L41) *warning:* **no visible global function definition for ‘retinaplot’**
```r
  retinaplot(my_retina)
  ^~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:2:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L2) *style:* **Lines should not be more than 80 characters.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:2:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L2) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:5:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L5) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 944,
^~
```
[inst/extdata/test_retinas/40oik5/main.r:5:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L5) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 944,
   ^~~
```
[inst/extdata/test_retinas/40oik5/main.r:21:15:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L21) *style:* **Commas should never have a space before.**
```r
  height = 25 ,# height of the counting frame in microns
             ~^
```
[inst/extdata/test_retinas/40oik5/main.r:21:16:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L21) *style:* **Commas should always have a space after.**
```r
  height = 25 ,# height of the counting frame in microns
               ^
```
[inst/extdata/test_retinas/40oik5/main.r:26:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L26) *style:* **Commas should never have a space before.**
```r
  extrapolate = TRUE ,          #Predicts densities to the equator.
                    ~^
```
[inst/extdata/test_retinas/40oik5/main.r:28:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L28) *style:* **Lines should not be more than 80 characters.**
```r
  rotation_ccw = 0, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:29:16:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L29) *style:* **Put spaces around all infix operators.**
```r
  plot_suppress=TRUE,
              ~^~
```
[inst/extdata/test_retinas/40oik5/main.r:34:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L34) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina, rotation=115, col_breaks_source = c(0, 35000))
^~~~~~~~~~
```
[inst/extdata/test_retinas/40oik5/main.r:34:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/40oik5/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
retinaplot(my_retina, rotation=115, col_breaks_source = c(0, 35000))
                             ~^~
```
[inst/extdata/test_retinas/8pm223/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L3) *style:* **Lines should not be more than 80 characters.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/8pm223/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/8pm223/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/8pm223/main.r:6:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L6) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 981,
^~
```
[inst/extdata/test_retinas/8pm223/main.r:6:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L6) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 981,
   ^~~
```
[inst/extdata/test_retinas/8pm223/main.r:22:15:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L22) *style:* **Commas should never have a space before.**
```r
  height = 25 ,# height of the counting frame in microns
             ~^
```
[inst/extdata/test_retinas/8pm223/main.r:22:16:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L22) *style:* **Commas should always have a space after.**
```r
  height = 25 ,# height of the counting frame in microns
               ^
```
[inst/extdata/test_retinas/8pm223/main.r:27:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L27) *style:* **Commas should never have a space before.**
```r
  extrapolate = TRUE ,          #Predicts densities to the equator.
                    ~^
```
[inst/extdata/test_retinas/8pm223/main.r:29:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L29) *style:* **Lines should not be more than 80 characters.**
```r
  rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/8pm223/main.r:30:16:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L30) *style:* **Put spaces around all infix operators.**
```r
  plot_suppress=TRUE,
              ~^~
```
[inst/extdata/test_retinas/8pm223/main.r:34:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/8pm223/main.r#L34) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina)
^~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.1 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L8) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 1210,
^~
```
[inst/extdata/test_retinas/bjii4t/main.r:8:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L8) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 1210,
   ^~~
```
[inst/extdata/test_retinas/bjii4t/main.r:12:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1210-72)/20,
                             ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:12:35:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1210-72)/20,
                                 ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:13:30:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (928-46)/15)
                            ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:13:34:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (928-46)/15)
                                ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:26:21:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L26) *style:* **Commas should never have a space before.**
```r
        height = 45 ,# height of the counting frame in microns
                   ~^
```
[inst/extdata/test_retinas/bjii4t/main.r:26:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L26) *style:* **Commas should always have a space after.**
```r
        height = 45 ,# height of the counting frame in microns
                     ^
```
[inst/extdata/test_retinas/bjii4t/main.r:31:28:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L31) *style:* **Commas should never have a space before.**
```r
        extrapolate = TRUE ,          #Predicts densities to the equator.
                          ~^
```
[inst/extdata/test_retinas/bjii4t/main.r:33:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L33) *style:* **Lines should not be more than 80 characters.**
```r
        rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:34:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
        plot_suppress=TRUE,
                    ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:41:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L41) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina)
^~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:43:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L43) *style:* **Variable or function name should be snake_case.**
```r
findPeak <- function(my_retina){
^~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:44:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L44) *style:* **Use spaces to indent, not tabs.**
```r
	coord <- my_retina$trimmed_data
^
```
[inst/extdata/test_retinas/bjii4t/main.r:45:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L45) *style:* **Use spaces to indent, not tabs.**
```r
	peak_temp <- coord[which.max(coord$z),]
^
```
[inst/extdata/test_retinas/bjii4t/main.r:45:40:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L45) *style:* **Commas should always have a space after.**
```r
	peak_temp <- coord[which.max(coord$z),]
                                       ^
```
[inst/extdata/test_retinas/bjii4t/main.r:46:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Lines should not be more than 80 characters.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:46:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Use spaces to indent, not tabs.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
^
```
[inst/extdata/test_retinas/bjii4t/main.r:46:29:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Put spaces around all infix operators.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                           ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:46:45:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Commas should always have a space after.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                                            ^
```
[inst/extdata/test_retinas/bjii4t/main.r:46:59:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Put spaces around all infix operators.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                                                         ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:46:71:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Commas should always have a space after.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                                                                      ^
```
[inst/extdata/test_retinas/bjii4t/main.r:46:79:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Put spaces around all infix operators.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                                                                             ~^~
```
[inst/extdata/test_retinas/bjii4t/main.r:46:91:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L46) *style:* **Commas should always have a space after.**
```r
	peak <- data.frame(latitude=abs(peak_temp[,1]), longitude=peak_temp[,2], peak=peak_temp[,3])
                                                                                ^
```
[inst/extdata/test_retinas/bjii4t/main.r:47:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L47) *style:* **Use spaces to indent, not tabs.**
```r
	return(peak)
^
```
[inst/extdata/test_retinas/bjii4t/main.r:48:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L48) *style:* **Use spaces to indent, not tabs.**
```r
	}
^
```
[inst/extdata/test_retinas/bjii4t/main.r:53:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L53) *style:* **Commented code should be removed.**
```r
  #lambda=0.001
   ^~~~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:54:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L54) *style:* **Commented code should be removed.**
```r
  #polynomial_m=2
   ^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/bjii4t/main.r:55:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/bjii4t/main.r#L55) *style:* **Commented code should be removed.**
```r
  #rotation=30
   ^~~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L3) *style:* **Lines should not be more than 80 characters.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L8) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 1084,
^~
```
[inst/extdata/test_retinas/gv3igs/main.r:8:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L8) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 1084,
   ^~~
```
[inst/extdata/test_retinas/gv3igs/main.r:12:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1084-100)/21,
                             ~^~
```
[inst/extdata/test_retinas/gv3igs/main.r:12:36:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1084-100)/21,
                                  ~^~
```
[inst/extdata/test_retinas/gv3igs/main.r:13:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (1022-36)/14)
                             ~^~
```
[inst/extdata/test_retinas/gv3igs/main.r:13:35:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (1022-36)/14)
                                 ~^~
```
[inst/extdata/test_retinas/gv3igs/main.r:26:21:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L26) *style:* **Commas should never have a space before.**
```r
        height = 35 ,# height of the counting frame in microns
                   ~^
```
[inst/extdata/test_retinas/gv3igs/main.r:26:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L26) *style:* **Commas should always have a space after.**
```r
        height = 35 ,# height of the counting frame in microns
                     ^
```
[inst/extdata/test_retinas/gv3igs/main.r:31:28:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L31) *style:* **Commas should never have a space before.**
```r
        extrapolate = TRUE ,          #Predicts densities to the equator.
                          ~^
```
[inst/extdata/test_retinas/gv3igs/main.r:33:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L33) *style:* **Lines should not be more than 80 characters.**
```r
        rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:34:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
        plot_suppress=TRUE,
                    ~^~
```
[inst/extdata/test_retinas/gv3igs/main.r:41:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L41) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina,rotation=270)
^~~~~~~~~~
```
[inst/extdata/test_retinas/gv3igs/main.r:41:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L41) *style:* **Commas should always have a space after.**
```r
retinaplot(my_retina,rotation=270)
                     ^
```
[inst/extdata/test_retinas/gv3igs/main.r:41:30:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/gv3igs/main.r#L41) *style:* **Put spaces around all infix operators.**
```r
retinaplot(my_retina,rotation=270)
                            ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L3) *style:* **Lines should not be more than 80 characters.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/jhvbwt/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.001 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/jhvbwt/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/jhvbwt/main.r:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L8) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 1189,
^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:8:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L8) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 1189,
   ^~~
```
[inst/extdata/test_retinas/jhvbwt/main.r:12:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1189-26)/19,
                             ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:12:35:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1189-26)/19,
                                 ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:13:30:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (986-81)/15)
                            ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:13:34:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (986-81)/15)
                                ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:26:21:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L26) *style:* **Commas should never have a space before.**
```r
        height = 25 ,# height of the counting frame in microns
                   ~^
```
[inst/extdata/test_retinas/jhvbwt/main.r:26:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L26) *style:* **Commas should always have a space after.**
```r
        height = 25 ,# height of the counting frame in microns
                     ^
```
[inst/extdata/test_retinas/jhvbwt/main.r:31:28:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L31) *style:* **Commas should never have a space before.**
```r
        extrapolate = TRUE ,          #Predicts densities to the equator.
                          ~^
```
[inst/extdata/test_retinas/jhvbwt/main.r:33:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L33) *style:* **Lines should not be more than 80 characters.**
```r
        rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/jhvbwt/main.r:34:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
        plot_suppress=TRUE,
                    ~^~
```
[inst/extdata/test_retinas/jhvbwt/main.r:41:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/jhvbwt/main.r#L41) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina)
^~~~~~~~~~
```
[inst/extdata/test_retinas/raxp91/main.r:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L3) *style:* **Variable or function name should be snake_case.**
```r
LAMBDA_var <- 0.1 #Thin plate spline smoothing. Lambda=0 would be interpolation.
^~~~~~~~~~
```
[inst/extdata/test_retinas/raxp91/main.r:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L4) *style:* **Variable or function name should be snake_case.**
```r
RESOLUTION_var <- 500 #Plot width in pixels
^~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/raxp91/main.r:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L8) *style:* **Variable or function name should be snake_case.**
```r
IJ <-data.frame(maxX = 1016,
^~
```
[inst/extdata/test_retinas/raxp91/main.r:8:4:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L8) *style:* **Put spaces around all infix operators.**
```r
IJ <-data.frame(maxX = 1016,
   ^~~
```
[inst/extdata/test_retinas/raxp91/main.r:12:31:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1016-25)/18,
                             ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:12:35:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L12) *style:* **Put spaces around all infix operators.**
```r
                deltaX = (1016-25)/18,
                                 ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:13:30:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (923-48)/17)
                            ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:13:34:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L13) *style:* **Put spaces around all infix operators.**
```r
                deltaY = (923-48)/17)
                                ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:26:21:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L26) *style:* **Commas should never have a space before.**
```r
        height = 45 ,# height of the counting frame in microns
                   ~^
```
[inst/extdata/test_retinas/raxp91/main.r:26:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L26) *style:* **Commas should always have a space after.**
```r
        height = 45 ,# height of the counting frame in microns
                     ^
```
[inst/extdata/test_retinas/raxp91/main.r:31:28:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L31) *style:* **Commas should never have a space before.**
```r
        extrapolate = TRUE ,          #Predicts densities to the equator.
                          ~^
```
[inst/extdata/test_retinas/raxp91/main.r:33:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L33) *style:* **Lines should not be more than 80 characters.**
```r
        rotation_ccw = -90, # when set to -90 degrees, the rotation is unaltered from the measured orientation.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/extdata/test_retinas/raxp91/main.r:34:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L34) *style:* **Put spaces around all infix operators.**
```r
        plot_suppress=TRUE,
                    ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:41:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L41) *warning:* **no visible global function definition for ‘retinaplot’**
```r
retinaplot(my_retina, lambda=0.001, polynomial_m=	2, rotation=30)
^~~~~~~~~~
```
[inst/extdata/test_retinas/raxp91/main.r:41:29:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L41) *style:* **Put spaces around all infix operators.**
```r
retinaplot(my_retina, lambda=0.001, polynomial_m=	2, rotation=30)
                           ~^~
```
[inst/extdata/test_retinas/raxp91/main.r:41:49:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L41) *style:* **Put spaces around all infix operators.**
```r
retinaplot(my_retina, lambda=0.001, polynomial_m=	2, rotation=30)
                                               ~^
```
[inst/extdata/test_retinas/raxp91/main.r:41:62:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/inst/extdata/test_retinas/raxp91/main.r#L41) *style:* **Put spaces around all infix operators.**
```r
retinaplot(my_retina, lambda=0.001, polynomial_m=	2, rotation=30)
                                                            ~^~
```
[R/composite.R:2:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:2:2:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L2) *style:* **Commented code should be removed.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:6:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L6) *style:* **Lines should not be more than 80 characters.**
```r
##' @param plot Logical, by default false, but when true it will output the plot where the first element in the list is fixed.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:7:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
##' @param ... Arguments passed from other functions. You can access the thin plate spline interpolator here.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L8) *style:* **Lines should not be more than 80 characters.**
```r
##' @return composite_mat Matrix of the composite retina, where the first element of the retina list is fixed.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:9:2:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L9) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian.cohn@@usc.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:11:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
vector_retina_composite <- function(retina_list, spin_spatial_res = 128, plot_spatial_res = 512,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:11:97:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L11) *style:* **Trailing whitespace is superfluous.**
```r
vector_retina_composite <- function(retina_list, spin_spatial_res = 128, plot_spatial_res = 512,
                                                                                ^
```
[R/composite.R:14:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
        rotation_degree_list <- compute_rotation_matrix(retina_list, spatial_res = spin_spatial_res,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:14:101:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L14) *style:* **Trailing whitespace is superfluous.**
```r
        rotation_degree_list <- compute_rotation_matrix(retina_list, spatial_res = spin_spatial_res,
                                                                                ^
```
[R/composite.R:19:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L19) *style:* **Lines should not be more than 80 characters.**
```r
    sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res = plot_spatial_res)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:19:12:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L19) *warning:* **no visible global function definition for ‘map_vec_sum’**
```r
    sum <- map_vec_sum(retina_list, rotation_degree_list, spatial_res = plot_spatial_res)
           ^~~~~~~~~~~
```
[R/composite.R:20:25:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L20) *style:* **Put spaces around all infix operators.**
```r
    composite_mat <- sum/n  #get the average
                       ~^~
```
[R/composite.R:21:14:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L21) *style:* **Trailing whitespace is superfluous.**
```r
    if (plot)
             ^
```
[R/composite.R:22:9:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L22) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
        {
        ^
```
[R/composite.R:25:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
            plot_from_MAT(MATRIX = composite_mat, extrapolate = TRUE, spatial_res = plot_spatial_res,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:25:102:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L25) *style:* **Trailing whitespace is superfluous.**
```r
            plot_from_MAT(MATRIX = composite_mat, extrapolate = TRUE, spatial_res = plot_spatial_res,
                                                                                ^
```
[R/composite.R:26:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L26) *style:* **Lines should not be more than 80 characters.**
```r
                col_levels = 50, contour_levels = 20, contour_breaks_source = c(min(composite_mat),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:26:100:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L26) *style:* **Trailing whitespace is superfluous.**
```r
                col_levels = 50, contour_levels = 20, contour_breaks_source = c(min(composite_mat),
                                                                                ^
```
[R/composite.R:27:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L27) *style:* **Lines should not be more than 80 characters.**
```r
                  max(composite_mat)), col_breaks_source = c(min(composite_mat),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:27:81:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L27) *style:* **Trailing whitespace is superfluous.**
```r
                  max(composite_mat)), col_breaks_source = c(min(composite_mat),
                                                                                ^
```
[R/composite.R:28:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
                  max(composite_mat)), z1 = Pmol_753$azimuthal_data.datapoints[[1]]$z,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:28:87:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L28) *style:* **Trailing whitespace is superfluous.**
```r
                  max(composite_mat)), z1 = Pmol_753$azimuthal_data.datapoints[[1]]$z,
                                                                                ^
```
[R/composite.R:35:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L35) *style:* **Lines should not be more than 80 characters.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:35:2:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L35) *style:* **Commented code should be removed.**
```r
##' @param retina_list A list containing retina objects, with names(retina_list) all defined.
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:36:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
##' @param rotation_indices Each value in this vector will correspond to the amount of rotation applied to each retina in the list.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:37:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L37) *style:* **Lines should not be more than 80 characters.**
```r
##' @param ... Arguments passed from other functions. You can access the thin plate spline interpolator here.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:38:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L38) *style:* **Lines should not be more than 80 characters.**
```r
##' @return sum_mat The sum of all retina objects in the list, with respect to the rotation indices.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:39:2:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L39) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian.cohn@@usc.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:41:16:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L41) *warning:* **no visible global function definition for ‘mat_from_ret_obj’**
```r
    sum_mat <- mat_from_ret_obj(retina_list[[1]], rotation = 0, ...)
               ^~~~~~~~~~~~~~~~
```
[R/composite.R:44:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
        sum_mat <- sum_mat + mat_from_ret_obj(retina_list[[i]], rotation_indices[i],
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/composite.R:44:85:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/composite.R#L44) *style:* **Trailing whitespace is superfluous.**
```r
        sum_mat <- sum_mat + mat_from_ret_obj(retina_list[[i]], rotation_indices[i],
                                                                                ^
```
[R/matrix_retobj.R:3:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L3) *style:* **Lines should not be more than 80 characters.**
```r
##' You can decide how much to rotate the retina before returning the matrix. You can also pass arguments to the polar plotter.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:6:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L6) *style:* **Lines should not be more than 80 characters.**
```r
##' @param n the number by which to divide the matrix by. Useful when generating partial averages.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:7:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
##' @param reflect logical, by default it is TRUE, in order to view the retina from outside the eye (rather than from within.)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:10:2:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L10) *style:* **Commented code should be removed.**
```r
##' @author Brian Cohn \email{brian.cohn@@usc.edu} and Lars Schmitz
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:12:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
mat_from_ret_obj <- function(retina_object, rotation = 0, n = 1, reflect = TRUE,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:12:81:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
mat_from_ret_obj <- function(retina_object, rotation = 0, n = 1, reflect = TRUE,
                                                                                ^
```
[R/matrix_retobj.R:17:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L17) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/matrix_retobj.R:20:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L20) *style:* **Lines should not be more than 80 characters.**
```r
    az <- mapproject(x = retina_object$trimmed_data[, 2], retina_object$trimmed_data[,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:20:87:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L20) *style:* **Trailing whitespace is superfluous.**
```r
    az <- mapproject(x = retina_object$trimmed_data[, 2], retina_object$trimmed_data[,
                                                                                ^
```
[R/matrix_retobj.R:25:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L25) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/matrix_retobj.R:27:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L27) *style:* **Lines should not be more than 80 characters.**
```r
    map2fit <- fit_plot_azimuthal(x2, y2, z2, plot_suppress = TRUE, extrapolate = TRUE,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:27:88:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L27) *style:* **Trailing whitespace is superfluous.**
```r
    map2fit <- fit_plot_azimuthal(x2, y2, z2, plot_suppress = TRUE, extrapolate = TRUE,
                                                                                ^
```
[R/matrix_retobj.R:28:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
        outer.radius = pi/2, falciform_coords = retina_object$azimuthal_data.falciform[[1]],
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matrix_retobj.R:28:26:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L28) *style:* **Put spaces around all infix operators.**
```r
        outer.radius = pi/2, falciform_coords = retina_object$azimuthal_data.falciform[[1]],
                        ~^~
```
[R/matrix_retobj.R:28:93:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L28) *style:* **Trailing whitespace is superfluous.**
```r
        outer.radius = pi/2, falciform_coords = retina_object$azimuthal_data.falciform[[1]],
                                                                                ^
```
[R/matrix_retobj.R:30:5:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L30) *style:* **Variable or function name should be snake_case.**
```r
    MAT <- map2fit[[2]]$z
    ^~~
```
[R/matrix_retobj.R:32:15:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/matrix_retobj.R#L32) *style:* **Put spaces around all infix operators.**
```r
    return(MAT/n)
             ~^~
```
[R/plotting_functions.R:4:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L4) *style:* **Lines should not be more than 80 characters.**
```r
##' Shows a visualization of the outline, as well as the location of each datapoint so the user can identify where the tears are.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:7:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
##' @param path_to_retina_data_folder The path to the folder that contains the outline.roi file.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:8:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L8) *style:* **Lines should not be more than 80 characters.**
```r
##' @return roi_coordinates XY vals of pixel coordinates of the outline points, in order.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:11:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
	roi_object <- RImageJROI::read.ijroi(file.path(path_to_retina_data_folder, "outline.roi"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:11:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L11) *style:* **Use spaces to indent, not tabs.**
```r
	roi_object <- RImageJROI::read.ijroi(file.path(path_to_retina_data_folder, "outline.roi"))
^
```
[R/plotting_functions.R:14:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L14) *style:* **Use spaces to indent, not tabs.**
```r
		## ImageJ ROI format plots has the coordinate (0, 0) in the top
^~
```
[R/plotting_functions.R:15:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L15) *style:* **Use spaces to indent, not tabs.**
```r
		  ## left.  We have the coordinate (0, 0) in the bottom left. We need
^~
```
[R/plotting_functions.R:16:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L16) *style:* **Use spaces to indent, not tabs.**
```r
		  ## to transform P so that the outline appears in the correct
^~
```
[R/plotting_functions.R:17:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L17) *style:* **Use spaces to indent, not tabs.**
```r
		  ## orientation.
^~
```
[R/plotting_functions.R:18:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L18) *style:* **Use spaces to indent, not tabs.**
```r
			im <- NULL
^~~
```
[R/plotting_functions.R:19:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L19) *style:* **Use spaces to indent, not tabs.**
```r
		  roi_XY_coords <- roi_object$coords
^~
```
[R/plotting_functions.R:19:5:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L19) *style:* **Variable or function name should be snake_case.**
```r
		  roi_XY_coords <- roi_object$coords
    ^~~~~~~~~~~~~
```
[R/plotting_functions.R:20:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L20) *style:* **Use spaces to indent, not tabs.**
```r
		  offset <- ifelse(is.null(im), max(roi_XY_coords[,2]), nrow(im))
^~
```
[R/plotting_functions.R:20:54:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L20) *style:* **Commas should always have a space after.**
```r
		  offset <- ifelse(is.null(im), max(roi_XY_coords[,2]), nrow(im))
                                                     ^
```
[R/plotting_functions.R:21:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L21) *style:* **Use spaces to indent, not tabs.**
```r
		  roi_XY_coords[,2] <- offset - roi_XY_coords[,2]
^~
```
[R/plotting_functions.R:21:20:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L21) *style:* **Commas should always have a space after.**
```r
		  roi_XY_coords[,2] <- offset - roi_XY_coords[,2]
                   ^
```
[R/plotting_functions.R:21:50:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L21) *style:* **Commas should always have a space after.**
```r
		  roi_XY_coords[,2] <- offset - roi_XY_coords[,2]
                                                 ^
```
[R/plotting_functions.R:24:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Lines should not be more than 80 characters.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:24:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Use spaces to indent, not tabs.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
^
```
[R/plotting_functions.R:24:26:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Put spaces around all infix operators.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                        ~^~
```
[R/plotting_functions.R:24:35:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Put spaces around all infix operators.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                 ~^~
```
[R/plotting_functions.R:24:36:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Only use double-quotes.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                   ^~~~~~~~~
```
[R/plotting_functions.R:24:50:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Put spaces around all infix operators.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                                ~^~
```
[R/plotting_functions.R:24:58:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Put spaces around all infix operators.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                                        ~^~
```
[R/plotting_functions.R:24:59:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Only use double-quotes.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                                          ^~~~~~~~~~
```
[R/plotting_functions.R:24:75:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Put spaces around all infix operators.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                                                         ~^~
```
[R/plotting_functions.R:24:76:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L24) *style:* **Only use double-quotes.**
```r
	plot(roi_XY_coords, type="l", col='#d3d3d3', asp=1, xlab='X Pixels', ylab='Y Pixels');
                                                                           ^~~~~~~~~~
```
[R/plotting_functions.R:25:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
	text(roi_XY_coords[,1],roi_XY_coords[,2], labels=1:length(roi_XY_coords[,1]), cex=0.5)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting_functions.R:25:1:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L25) *style:* **Use spaces to indent, not tabs.**
```r
	text(roi_XY_coords[,1],roi_XY_coords[,2], labels=1:length(roi_XY_coords[,1]), cex=0.5)
^
```
[R/plotting_functions.R:25:22:](https://github.com/briancohn/retina/blob/0a7d7c0d4c8b7c5315eebfefb2fb54dea3acccea/R/plotting_functions.R#L25) *style:* **Commas should always have a space after.**
```r
	text(roi_XY_coords[,1],roi_XY_coords[,2], labels=1:length(roi_XY_coords[,1]), cex=0.5)
                     ^
```


@scribblemaniac  Maybe: "You've got a talent, man..."?


why did you do this?


<null>


test


<none>


@LinusU, oh, good to know. Might as well skip the check here and use it directly then :).


Good catch! 😄  ++++


One more thing regarding this.
I noticed it while translating.
You made the textbox auto detect RTL and act on it
Now it works great, but if you're using Translators mode, and you have both english and another RTL language.
When using RTL English shows up correctly in Textbox because of auto detection
But it shows up reversed in List View.
Not sure if you would be interested in fixing this.


Fixes #32


Scene_Classify is a deep CNN classification project that presents the implementation of Inception_-ResNet_v2 model as a feature extractor in classifying scene images with concentration to the visualisation of the feature vectors that are instrumental in both spatial and local recognition.

Scene_Classify is a deep CNN classification project that presents the implementation of Inception_-ResNet_v2 model as a feature extractor in classifying scene images with concentration to the visualisation of the feature vectors that are instrumental in both spatial and local recognition.

Scene_Classify is a deep CNN classification project that presents the implementation of Inception_-ResNet_v2 model as a feature extractor in classifying scene images with concentration to the visualisation of the feature vectors that are instrumental in both spatial and local recognition.

Scene_Classify is a deep CNN classification project that presents the implementation of Inception_-ResNet_v2 model as a feature extractor in classifying scene images with concentration to the visualisation of the feature vectors that are instrumental in both spatial and local recognition.

Scene_Classify is a deep CNN classification project that presents the implementation of Inception_-ResNet_v2 model as a feature extractor in classifying scene images with concentration to the visualisation of the feature vectors that are instrumental in both spatial and local recognition.


The file imports stdlib.h either case. By the way, check both ways and leave the one that works.
I'm okay if you delete both functions.


Yeah, copy-pasted from another project.


Not a fan of this part. If I understand Deref correctly, the go fields may be stale in the future. A nil pointer panic exception is nicer than not noticing that something went wrong because of stale contents. Copying this before Deref should allow using RLock on a.mux and removes the need for activityMux, so you get concurrency as well (*android.NativeActivity is thread safe right?).


I already fixed this in the following update.


&是一个位运算符，就是将两个二进制的数逐位相与，就是都是1才是1，只要有一个为0则为0，结果是相与之后的结果。
&&是一个逻辑运算符，就是判断两个表达式的真假性，只有两个表达式同时为真才为真，有一个为假则为假，具有短路性质。


No sure what you mean by controllable. Are you thinking about the no pointer to pointer restriction. If so, the android.AssetRead code doesn't wrap this pointer, so this should be safe.


Hi @itaiferber I was just looking at this and had a thought. Doesn't this mean that the dictionary must be formatted with one element per line? Otherwise you'll get `Dictionary literal contains duplicate keys` error.  Wouldn't it be better if it was a `[AffineTransform : Int]` instead?

Or did doing it this way make copying and pasting all the `#line : `s easier? 🙂


[tests/testthat/test_plots.R:7:5:](https://github.com/hbc/bcbioRnaseq/blob/cbcf6142df6ae0a570c02e44c18550d2afb8eb2b/tests/testthat/test_plots.R#L7) *style:* **Variable or function name should be snake_case.**
```r
    geomType <- sapply(p[["layers"]], function(x) class(x[["geom"]])[[1L]])
    ^~~~~~~~
```


@fedorov  All set. See http://viewvc.slicer.org/viewvc.cgi/Slicer4?view=revision&revision=26274


I think it's fine to drop support for 10.7, if it is what using libc++ implies.


C'est commité entre temps, merci


Thank you, I will check and update the schema.


It's second nature now...!


#Test


Thank you @jcfr


i have question here please, remember when we created customerDto and MovieDto we used the mapping profile class defined in App_start to map the customer to CustomerDto  and vice versa , how come we are not mapping the NewRentalDto to Rental class?


What killed the feature? It seems like a useful one to me.


Even a `[(Int, AffineTransform)]` might be better...


Note that it takes 1008 steps now (vs 1352 from before). But we also increased the tolerance to top 30..


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160918 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160918") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160934 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160934") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-Prod-20170815-160950 "deployed-2-env-Prod-20170815-160950") to [Prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "There was a problem retrieving the space name"), including this commit


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160959 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-160959") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


Huge help. I was definitely going down a different path...


"Not a fan of this part" — I can't locate the exact line you're talking about :(
But any access to fields of `*nativeActivity` must be protected by `a.mux`, and any access to fields of `a.activity` must be protected by `a.activityMux`, for this case access to AssetManager is protected by lock in the nativeActivity.

The pointer AssetManager is being read from C once, I don't think it would "stale".


The feature is good, but the implementation needs work.


tested the psudo code and getting
```Notice: Compiled catalog for desktop-a83d815.localdomain in environment production in 0.87 seconds
Notice: /Stage[main]/Sal_client::Windows_install/Scheduled_task[sal2]/ensure: created
Notice: Applied catalog in 2.11 seconds```

LGTM!


sve ok 👍


Would you be willing to update the links to the tutorial? If you no longer have a website I would be happy to host them and give you credit on my blog. I can find part 1, 3 and 4 on the internet wayback machine, but I can't pull up part 2 for some reason.


bei der _version.php soll das release sicher 15.08. statt 15.07. sein :)


ok je 👍


Ok je 👍


could you put CLEVR next to the other visual stuff, so at the end of the list, thanks!


Vanity URL Test


Added Htlm to my spark application


Sure! I can always change it back after!


Controllable i.e. we know how exactly where it's allocated and when it'd be deallocated.
This is a matter of taste.

> so this should be safe.

Yeah


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161851 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161851") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


this file is being added now and I should have noticed it was missing from the prior version.

- where does this get built and then pushed to the official repo?
- can we add that as a unit test so we have a clear statement that 'the Dockerfile checked in will build'?


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161905 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161905") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-Prod-20170815-161910 "deployed-2-env-Prod-20170815-161910") to [Prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "There was a problem retrieving the space name"), including this commit


Bluemix toolchain: An unknown tool deployed [testRepo-Traceability](https://github.com/idsdev/testRepo-Traceability/releases/tag/deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161919 "deployed-2-env-ibm-yp-us-south-user-ibm.com-prod-20170815-161919") to [prod](https://console.bluemix.net/apps/6e3bc311-c83d-4cd1-a457-99d9a5f20f19?env_id=ibm:yp:us-south "ibm:yp:us-south:user@ibm.com:prod"), including this commit


this is an apt cleaning operation, does it make sense to push it into clean-apt?


clean-install calls clean-apt, is there are reason to run clean-apt again?


I would maybe rename this to `KafkaClusterTest` or something alone those lines.


Good catch. Noted in my buglist. Could be one of those encode/decodeURIcomponent issues...


I already reverted and redid it.
You'll need to rebase and branches you have.


Beyond1Airloop (mjwitte) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-IntegrationCoverage-Debug: OK (1977 of 1978 tests passed, 0 test warnings)

Failures:

integration Test Summary
 * Passed: 604
 * Failed: 1

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.95%25-yellow.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-71.81%25-green.png)


แก้ไขปัญหที่ผิดพลาด


Amigo, me gustaría igual puedas ayudarme a solucionar unos bugs de la base que tengo para el redmi 4 pro (markw), igual podríamos intentar adaptar el kernel para el xiaomi redmi note 4 (mido), en un principio debe tener estos bugs:
No funciona la cámara
Al bloquear el equipo con el botón de power, e intentar desbloquearlo, la pantalla ya no vuelve a encender
Igual te dejo mi numero de contacto: +529993974447
Estoy en Whatsapp y en Telegram


Wow! Looks very handy


Here are the benchmark results. The

* ARMv8 AES, Opteron server, single block

```
<TR><TH>AES/CTR (128-bit key)<TD>707<TD>2.5<TD>0.422<TD>786
<TR><TH>AES/CTR (192-bit key)<TD>627<TD>2.8<TD>0.462<TD>860
<TR><TH>AES/CTR (256-bit key)<TD>563<TD>3.1<TD>0.494<TD>918
<TR><TH>AES/CBC (128-bit key)<TD>476<TD>3.7<TD>0.377<TD>700
<TR><TH>AES/CBC (192-bit key)<TD>448<TD>4.0<TD>0.388<TD>721
<TR><TH>AES/CBC (256-bit key)<TD>412<TD>4.3<TD>0.425<TD>791
<TR><TH>AES/OFB (128-bit key)<TD>570<TD>3.1<TD>0.453<TD>842
<TR><TH>AES/CFB (128-bit key)<TD>684<TD>2.6<TD>0.469<TD>872
<TR><TH>AES/ECB (128-bit key)<TD>765<TD>2.3<TD>0.181<TD>336
```

* ARMv8 AES, Opteron server, 4x blocks

```
<TR><TH>AES/CTR (128-bit key)<TD>1545<TD>1.1<TD>0.414<TD>771
<TR><TH>AES/CTR (192-bit key)<TD>1341<TD>1.3<TD>0.439<TD>817
<TR><TH>AES/CTR (256-bit key)<TD>1055<TD>1.7<TD>0.472<TD>879
<TR><TH>AES/CBC (128-bit key)<TD>685<TD>2.6<TD>0.361<TD>672
<TR><TH>AES/CBC (192-bit key)<TD>603<TD>2.9<TD>0.392<TD>731
<TR><TH>AES/CBC (256-bit key)<TD>539<TD>3.3<TD>0.422<TD>785
<TR><TH>AES/OFB (128-bit key)<TD>592<TD>3.0<TD>0.432<TD>804
<TR><TH>AES/CFB (128-bit key)<TD>668<TD>2.7<TD>0.490<TD>913
<TR><TH>AES/ECB (128-bit key)<TD>1786<TD>1.0<TD>0.179<TD>333
```


Is it the place to put the tools that one need to use?


Thanks!


Hi,
was this change necessary for something else?
It is screwing all the backwards compatibility with the EDGE code (several people using it) and I was wondering if it could be redone.
Thanks!


Can be used directly as an alternative to HashMap in java


Or is it implied?


Chrome web tool to see concretely what is happening for ex.


This should be `{11}`, shouldn't it? I keep getting "Invalid number format" errors trying to use my number.


It hasn't handled when E(char) is out of range [a . . . z] :(


Yeah, it would. I couldn't come up with any good solution, so this will have to do for now. The last version in the 2 range is 2.3.2 so it's unlikely that anyone would put 2.9.10 in their package.json. But for sure it's a ugly solution.


Имя класса не должно быть привязано к right или left. В данном случае нет смысла скакой стороны располагаются колонки, суть только в том что это galery-item и width у него должна быть 50% от родителя.


@case-eee @laurenfazah I didn't change the markdown, but here are some tailored slides.

For the actual sandbox part of the lesson, I plan on giving people the option to work solo, in small groups, or with me driving with a TV display. Any objections to that?


Do you have a final version without change tracking as well or is this the most up-to-date revision available right now?


_**> i dont no why, but i will never forget.**_
_**> i dont no why, but i will never forget.**_


Support Tech

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Our mission at npm is to reduce developer friction. We do it by building tools that make JavaScript developers' lives easier, by maintaining a registry with fantastic uptime, and by answering each of the tweets, emails, and GitHub issues that our users send us every day.

npm has been successful because we care about our users. "npm loves you" is not just marketing; it's a core company value. Users frequently report our responsive and friendly support team as a key reason why they love our products.

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The right people for this job combine empathy and communication skills with a passion for solving technical problems. Experience with Open Source and customer service are beneficial, but not required. Much more critical is a friendly, positive attitude and finding joy in helping people.

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Sometimes, this job is hard, because people frustrated by technical problems are not always polite. You'll be helping to keep the npm community a safe and friendly place, with the technical and emotional support of the entire company, and the gratitude of millions of developers who participate in the npm ecosystem.

You'll be a full employee with all benefits, including competitive salary and stock options.


galery_logo_text - тут лучше использовать разделитель -, андерскор _ я использую для того что-бы показать причастность елемента к его родителю, то есть елемнт не может существовать без своего родителя в принципе.


foot - лучше полное имя footer, не жадничай на символы :)


Love the small groups idea. Seems like a lot of folks are already starting to use webpack, so it'll probably be appreciated by some to work solo.


Oh, this is cool. You don't have to do anything with readline besides import it to get the cursor functionality from it?