[R/create_beast2_input_beast.R:28:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_beast.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
    "namespace=\"beast.core:beast.evolution.alignment:beast.evolution.tree.coalescent:beast.core.util:beast.evolution.nuc:beast.evolution.operators:beast.evolution.sitemodel:beast.evolution.substitutionmodel:beast.evolution.likelihood\" ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:12:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_data.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("id=\"", beastscriptr::get_file_base_sans_ext(input_fasta_filenames), "\""))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:14:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_data.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, beastscriptr::create_beast2_input_data_sequences(input_fasta_filenames = input_fasta_filenames))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:22:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_data.R#L22) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_data_sequences <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:8:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L8) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_distribution <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:20:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L20) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"YuleModel.t:", ids, "\" spec=\"beast.evolution.speciation.YuleModel\" birthDiffRate=\"@birthRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:21:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L21) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"YuleBirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@birthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:22:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L22) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.1\" name=\"distr\" upper=\"Infinity\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:25:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BirthDeath.t:", ids, "\" spec=\"beast.evolution.speciation.BirthDeathGernhard08Model\" birthDiffRate=\"@BDBirthRate.t:", ids, "\" relativeDeathRate=\"@BDDeathRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:26:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L26) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"BirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDBirthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:27:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L27) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.3\" name=\"distr\" upper=\"1000.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:29:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L29) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"DeathRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDDeathRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:30:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L30) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.4\" name=\"distr\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:33:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"CoalescentConstant.t:", ids, "\" spec=\"Coalescent\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:34:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L34) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <populationModel id=\"ConstantPopulation.t:", ids, "\" spec=\"ConstantPopulation\" popSize=\"@popSize.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:47:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BayesianSkyline.t:", ids, "\" spec=\"BayesianSkyline\" groupSizes=\"@bGroupSizes.t:", ids, "\" popSizes=\"@bPopSizes.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:48:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <treeIntervals id=\"BSPTreeIntervals.t:", ids, "\" spec=\"TreeIntervals\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:50:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"MarkovChainedPopSizes.t:", ids, "\" spec=\"beast.math.distributions.MarkovChainDistribution\" jeffreys=\"true\" parameter=\"@bPopSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"KappaPrior.s:", ids, "\" name=\"distribution\" x=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.1\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa1Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa1.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:64:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L64) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.4\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa2Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:69:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L69) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:70:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.5\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:71:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.6\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:75:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L75) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateACPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAC.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:76:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L76) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:77:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L77) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.7\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:78:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.8\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:81:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateAGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:82:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:83:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L83) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.9\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:84:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L84) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.10\" estimate=\"false\" name=\"beta\">20.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateATPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:88:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:89:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L89) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.11\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.12\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:93:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateCGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateCG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:94:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L94) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.3\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:95:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L95) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.13\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:96:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.14\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:99:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateGTPrior.s:", ids, "\" name=\"distribution\" x=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:100:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L100) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.5\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:101:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.17\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:102:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L102) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.18\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:133:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L133) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"JC69.s:", ids, "\" spec=\"JukesCantor\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:135:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L135) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"hky.s:", ids, "\" spec=\"HKY\" kappa=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:136:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L136) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:139:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L139) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"tn93.s:", ids, "\" spec=\"TN93\" kappa1=\"@kappa1.s:", ids, "\" kappa2=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:140:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L140) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:143:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"gtr.s:", ids, "\" spec=\"GTR\" rateAC=\"@rateAC.s:", ids, "\" rateAG=\"@rateAG.s:", ids, "\" rateAT=\"@rateAT.s:", ids, "\" rateCG=\"@rateCG.s:", ids, "\" rateGT=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:144:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L144) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <parameter id=\"rateCT.s:", ids, "\" estimate=\"false\" lower=\"0.0\" name=\"rateCT\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:145:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_distribution.R#L145) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_loggers.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"BayesianSkyline.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:53:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_loggers.R#L53) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_loggers.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:35:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L35) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"YuleBirthRateScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@birthRate.t:", ids, "\" scaleFactor=\"0.75\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:40:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeScaler.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeRootScaler.t:",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:52:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "UniformOperator.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "SubtreeSlide.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "Narrow.t:", ids, "\" spec=\"Exchange\" tree=\"@Tree.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:70:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "WilsonBalding.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:76:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L76) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"KappaScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:78:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:83:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L83) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa1Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa1.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa2Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa2.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:88:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:109:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L109) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"popSizesScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@bPopSizes.t:", ids, "\" scaleFactor=\"0.75\" weight=\"15.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:111:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L111) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"groupSizesDelta.t:", ids, "\" spec=\"DeltaExchangeOperator\" integer=\"true\" weight=\"6.0\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:112:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_operators.R#L112) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <intparameter idref=\"bGroupSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:38:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L38) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"birthRate.t:", ids, "\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:40:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDBirthRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"10000.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:41:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L41) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDDeathRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.5</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"popSize.t:", ids, "\" name=\"stateNode\">0.3</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:45:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"bPopSizes.t:", ids, "\" dimension=\"5\" lower=\"0.0\" name=\"stateNode\" upper=\"380000.0\">380.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"bGroupSizes.t:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"5\">1</stateNode>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:52:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:54:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L54) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa1.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa2.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAC.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:61:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateCG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateGT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/create_beast2_input_state.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_cbs_tree_prior.R:2:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/is_cbs_tree_prior.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @param x an object, to be determined if it is a valid constant coalescent Bayesian skyline prior
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_cbs_tree_prior.R:3:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/is_cbs_tree_prior.R#L3) *style:* **Lines should not be more than 80 characters.**
```r
#' @return TRUE if x is a valid constant coalescent Bayesian skyline prior, FALSE otherwise
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_ccp_tree_prior.R:2:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/is_ccp_tree_prior.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @param x an object, to be determined if it is a valid constant coalescence population tree prior
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_ccp_tree_prior.R:3:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/R/is_ccp_tree_prior.R#L3) *style:* **Lines should not be more than 80 characters.**
```r
#' @return TRUE if x is a valid constant coalescence population tree prior, FALSE otherwise
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input_data.R:8:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input_data.R#L8) *style:* **Lines should not be more than 80 characters.**
```r
  expected <- "                    <sequence id=\"seq_t1\" taxon=\"t1\" totalcount=\"4\" value=\"acttgttgcgactgcgcctg\"/>"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input_data.R:19:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input_data.R#L19) *style:* **Lines should not be more than 80 characters.**
```r
  expected <- "                    <sequence id=\"seq_t1\" taxon=\"t1\" totalcount=\"4\" value=\"acttgttgcgactgcgcctg\"/>"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "birth_death_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:82:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    tree_priors = beastscriptr::create_tree_prior(name = "coalescent_constant_population")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "coalescent_constant_population_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:101:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "yule_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:114:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L114) *style:* **Lines should not be more than 80 characters.**
```r
    tree_priors = beastscriptr::create_tree_prior(name = "coalescent_bayesian_skyline")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:117:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "coalescent_bayesian_skyline_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:128:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L128) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "jc69_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:139:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L139) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "hky_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:150:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L150) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "tn93_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:163:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-create_beast2_input.R#L163) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "gtr_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-is_yule_tree_prior.R:6:1:](https://github.com/richelbilderbeek/beastscriptr/blob/a19d3ab7730eb23fc39e3f173dd767d37e92254d/tests/testthat/test-is_yule_tree_prior.R#L6) *style:* **Lines should not be more than 80 characters.**
```r
  testthat::expect_false(is_yule_tree_prior(create_tree_prior(name = "birth_death")))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```


dead code


Created multidev environment [electronil#pr-conttyp3](https://dashboard.pantheon.io/sites/17d8094e-ddfb-4032-83e4-771bdf4a36d2#pr-conttyp3).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-conttyp3-electronil.pantheonsite.io/)


add a todo so you will remove it later.


@damaggu  could you please add the following to your `~/.vimrc` file so that we can avoid whitespace accumulation in the future?

```
highlight BadWhitespace ctermbg=red guibg=darkred
au BufRead,BufNewFile *.py,*.pyw,*.c,*.h match BadWhitespace /\s\+$/
```


un-necessary new line?


![](https://github.trello.services/images/mini-trello-icon.png) [fdfsf](https://trello.com/c/WLNzq2y5/1-fdfsf)


Good, just a few comments


I was just explaining why I got rid of ResponsiveEmbed. I put an iframe and it works fine, the responsiveness is not causing any issue so far


Right, but I think this would be a better alternative to achieve our goal of even distribution of requests, rather than recreating connections every time


Hi panzergame, I forgot to give you feedback for ge_enkits. Last time I tested I think I was based just before this commit. I had performances decrease unfortunately using ge_enkits on my computer on my usual performance test files.


I can not get round this:
Write a single-line comment on line 1. It can be anything! (Make sure it starts with #)
Set the variable monty equal to True.
Set another variable python equal to 1.234.
Set a third variable monty_python equal to python squared.


Explaining Preprocessor Directives & data types


can u help to interpret the statement in python
coding?


Explained Functions in C


It's pasted into pull request description text box verbatim and is not rendered as markdown. So, yes, this is intentional.


Explained printf() function & What is TRUE & FALSE in C


@G1GC Sure, we'll discuss that [here](https://github.com/ind9/arcane/pull/55#issuecomment-337882584), as that's outside the scope of this repo.


これで `$bundle exec db:migrate` すると

```
== 20171019101953 AddTokenUserUidToUsers: migrating ===========================-- add_column(:users, :provider, :string)
rails aborted!
StandardError: An error has occurred, this and all later migrations canceled:
SQLite3::SQLException: duplicate column name: provider: ALTER TABLE "users" ADD "provider" varchar
/Users/e155730/src/github.com/AnaTofuZ/enpit_er/db/migrate/20171019101953_add_token_user_uid_to_users.rb:3:in `change'bin/rails:4:in `require'
bin/rails:4:in `<main>'
ActiveRecord::StatementInvalid: SQLite3::SQLException: duplicate column name: provider: ALTER TABLE "users" ADD "provider" varchar
/Users/e155730/src/github.com/AnaTofuZ/enpit_er/db/migrate/20171019101953_add_token_user_uid_to_users.rb:3:in `change'
bin/rails:4:in `require'bin/rails:4:in `<main>'
SQLite3::SQLException: duplicate column name: provider
/Users/e155730/src/github.com/AnaTofuZ/enpit_er/db/migrate/20171019101953_add_token_user_uid_to_users.rb:3:in `change'
bin/rails:4:in `require'
bin/rails:4:in `<main>'
Tasks: TOP => db:migrate
(See full trace by running task with --trace)
```