@junegunn Absolutely but ag is available in many linux distributions by default whereas ripgrep isn't. Wouldn't hurt to mention ag as well. I am not allowed to install any software on our debian production server which isn't available in official repositories. you know people will try to use what you suggest even if this is just an example


Отступы не забывай


skillrack question


It is: https://github.com/fsprojects/Paket/issues/2863


@chrfrasco we are sharing our agignore files within the project. there are 9 ignored directories and many more ignored files. putting this in a one line ripgrep call isn't very nice.


Hm .... if you add closing brace (`}`), then you also have to add closing bracket (`]`) to be consistent ... or leave both out.


This is a security update: https://curl.haxx.se/docs/adv_20171023.html

Could you please mark such commits or cherry-pick them yourself into the release branches in the future?


Можно использовать assertTrue


Lockpicking divisor: `byte[18] @0x41e6a`
Class# to ClassId: `byte[18] @0x41e7c`
HDs: `byte[18] @0x42001`
Starting health is calculated as `random(1..HD)+healthBonus+25`.
Class attributes: `szlist @0x39b64`
Allowed weapons are stored as a 16-bit pointer array `@0x39eb5`. The base address is `0x36290`. NULL means any weapon. The weapon data are byte arrays of WeaponIds terminated with `0xFF`.
Allowed shields are stored in the same way `@0x39F01`.
Allowed armor: `byte[18] @0x39FC4`. Each byte is the minimal allowed armor type, so 3 is no armor, and 0 is plate or lower. The Knight's "no leather armor" rule is implemented separately.
XP for the level 1: `uint16[18] @0x3aa3e` Experience to get to the level _i_ is calculated as follows:
```
XP[0]=0
XP[1]=base_xp
XP[i]=floor(XP[i-1]*30/16), i=2..8
XP[i]=floor(XP[i-1]*1.5), i>8
```


(done: https://github.com/brainstorm-tools/brainstorm3/commit/16deebfa69a3099a0fa827a038cc6cbb30cf4de8)


Thanks! Though I think many of the of courses were justified -:)


Perfect, thanks!


Now it imposible to define keyword using example
@epoberezkin How you can comment it BREAKING CHANGE?


thanks for the fix ... this is strange I tested it w/o the config file and it seemed to work for me, anyway your fix seems more stable and generic.


This change wasn't indented to change any behaviour - it was required to enable compilation with CLion/CMake. Do you see any difference in the the bundles created when the identifier is explicitly set in the `.plist` templates, rather than using the Xcode variable? For the JUCE examples it appears to make no difference to the actual identifier written into the `Info.plist` files in the plug-in bundles.


![](https://github.trello.services/images/mini-trello-icon.png) [Prove we can get an access token with the access code](https://trello.com/c/zRPw2DQW/3-prove-we-can-get-an-access-token-with-the-access-code)


Fixes #206
Fixes #317


:white_check_mark: [CodeHound](https://github.com/CodeHoundBot) has built this commit using [AppVeyor](https://appveyor.com) and found that it is :ok:.

[![](https://img.shields.io/travis/rust-lang/rust.svg)](https://ci.appveyor.com/project/yotam180/xai/build/1.0.42)


Duplicado. Ya está descrito en la descripción de la actividad.


No; the whole change was a rollback. not sure what happened/


Bonjour,
Effectivement, un probléme de droit est present au lancement sans ce changement.


Hi,in line 170 I wonder if the shape of  the matrix is (batchSize)*3,maybe it is (batchSize*dimension)*3


@Alamgir  Thanks a  lot :)


As one can see, to avoid copying the intersection objects, and even the vector storing the pointers, the current implementation leaves all deletion responsibility to the client. It doesnt look like a viable solution. @jwintz


Looks great, this fixes the problems we had. Thanks for the quick patch! 💯


There is a duplicate declaration of sliced 🤐


```
S
 T
STAR
   R


@tdroxler don't forgot to contribute your changes back to upstream ;-)


The (plain) text area is hidden (you can't do syntax highlighting with a plain text area), so it never gets the focus. But even if it had the focus, the value is set after the content is converted asynchronously, after the syntax is selected so after the text area looses the focus.


Danke @GodMod


this wont work, use `public dbMask: number | null`


same here


To clarify - I'd really recommend we stick to PHP 5.3.x as minimum version for Textpattern 4.7. After that release we can probably quite safely target PHP 5.5 for Textpattern 4.8 given current trends.


and here too


`if 'DateSampled' in values` or similar.


```
  S    S
   T  T
 ST A R
    R

```
thanks


I think this is good enough as a fix


Can you please add it here also?
[http://www.yiiframework.com/doc-2.0/guide-db-active-record.html](http://www.yiiframework.com/doc-2.0/guide-db-active-record.html)
Relations via a Junction Table
> The difference between via() and viaTable() is ...

In my opinion here would be the best to mention:
> if you need relation via multiple tables you have to use via() instead of viaTable().
Thanks in advance!


@zylinx `if 'DateSampled' in values and ...` or `if values.get('DateSampled', False):`


I blame vim


@mtzguido @nikswamy Sorry, but I did test this on my own *Linux* machine and it works well and the regular CI server also said it's OK to merge. Not sure how the nightly or Guido's setup is different from mine. Can someone explain to me what fails?


My bad, I thought it was 5.4+ in which the shorthand ternery operator was introduced. If it's 5.3+, then that's cool.


Android B3 Practice 2


@ahmadnassri yes we will :)


should be dependent on the new configuration


januari <-> Januari


ok thanks Marius for the explanation, I get it now. Could be good to add your explanation as comment and explain that we manually trigger the change event because the textarea is hidden and thus doesn't have the focus (and thus it won't send a change event when loosing focus).


255 -> 180


Larger text on heatmap facet strips


this check should be applied in the foreach before actually applying things.


[R/create_beast2_input_beast.R:31:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_beast.R#L31) *style:* **Lines should not be more than 80 characters.**
```r
    "namespace=\"beast.core:beast.evolution.alignment:beast.evolution.tree.coalescent:beast.core.util:beast.evolution.nuc:beast.evolution.operators:beast.evolution.sitemodel:beast.evolution.substitutionmodel:beast.evolution.likelihood\" ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:12:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_data.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("id=\"", beastscriptr::get_file_base_sans_ext(input_fasta_filenames), "\""))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:14:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_data.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, beastscriptr::create_beast2_input_data_sequences(input_fasta_filenames = input_fasta_filenames))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:22:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_data.R#L22) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_data_sequences <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:10:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L10) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_distribution <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:23:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L23) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"YuleModel.t:", ids, "\" spec=\"beast.evolution.speciation.YuleModel\" birthDiffRate=\"@birthRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:24:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L24) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"YuleBirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@birthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:25:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.1\" name=\"distr\" upper=\"Infinity\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:28:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BirthDeath.t:", ids, "\" spec=\"beast.evolution.speciation.BirthDeathGernhard08Model\" birthDiffRate=\"@BDBirthRate.t:", ids, "\" relativeDeathRate=\"@BDDeathRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:29:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L29) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"BirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDBirthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:30:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L30) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.3\" name=\"distr\" upper=\"1000.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:32:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"DeathRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDDeathRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:33:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.4\" name=\"distr\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:36:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"CoalescentConstant.t:", ids, "\" spec=\"Coalescent\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:37:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L37) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <populationModel id=\"ConstantPopulation.t:", ids, "\" spec=\"ConstantPopulation\" popSize=\"@popSize.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:50:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BayesianSkyline.t:", ids, "\" spec=\"BayesianSkyline\" groupSizes=\"@bGroupSizes.t:", ids, "\" popSizes=\"@bPopSizes.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <treeIntervals id=\"BSPTreeIntervals.t:", ids, "\" spec=\"TreeIntervals\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:53:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L53) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"MarkovChainedPopSizes.t:", ids, "\" spec=\"beast.math.distributions.MarkovChainDistribution\" jeffreys=\"true\" parameter=\"@bPopSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"KappaPrior.s:", ids, "\" name=\"distribution\" x=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.1\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:61:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa1Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa1.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.4\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:71:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa2Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:72:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L72) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.5\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:74:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L74) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.6\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:78:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateACPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAC.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:80:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L80) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.7\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:81:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.8\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:84:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L84) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateAGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:86:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L86) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.9\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.10\" estimate=\"false\" name=\"beta\">20.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateATPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:92:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L92) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.11\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:93:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.12\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:96:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateCGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateCG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:97:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.3\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:98:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L98) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.13\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:99:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.14\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:102:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L102) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateGTPrior.s:", ids, "\" name=\"distribution\" x=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:103:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.5\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:104:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.17\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:105:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L105) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.18\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:111:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L111) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"ucldStdevPrior.c:", ids, "\" name=\"distribution\" x=\"@ucldStdev.c:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:112:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L112) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:113:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L113) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"alpha\">0.5396</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:114:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L114) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"beta\">0.3819</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:141:3:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L141) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/create_beast2_input_distribution.R:142:23:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L142) *warning:* **no visible global function definition for ‘get_prop_invariant’**
```r
    prop_invariant <- get_prop_invariant(site_models)
                      ^~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:146:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L146) *style:* **Lines should not be more than 80 characters.**
```r
      "name=\"proportionInvariant\" upper=\"1.0\">", prop_invariant, "</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:158:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L158) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"JC69.s:", ids, "\" spec=\"JukesCantor\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:160:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L160) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"hky.s:", ids, "\" spec=\"HKY\" kappa=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:161:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L161) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:164:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L164) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"tn93.s:", ids, "\" spec=\"TN93\" kappa1=\"@kappa1.s:", ids, "\" kappa2=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:165:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L165) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:168:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L168) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"gtr.s:", ids, "\" spec=\"GTR\" rateAC=\"@rateAC.s:", ids, "\" rateAG=\"@rateAG.s:", ids, "\" rateAT=\"@rateAT.s:", ids, "\" rateCG=\"@rateCG.s:", ids, "\" rateGT=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:169:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L169) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <parameter id=\"rateCT.s:", ids, "\" estimate=\"false\" lower=\"0.0\" name=\"rateCT\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:170:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L170) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:178:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L178) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <branchRateModel id=\"StrictClock.c:", ids, "\" spec=\"beast.evolution.branchratemodel.StrictClockModel\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:179:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L179) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"clockRate.c:", ids, "\" estimate=\"false\" name=\"clock.rate\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:182:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L182) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <branchRateModel id=\"RelaxedClock.c:", ids, "\" spec=\"beast.evolution.branchratemodel.UCRelaxedClockModel\" rateCategories=\"@rateCategories.c:", ids, "\" tree=\"@Tree.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:183:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L183) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <LogNormal id=\"LogNormalDistributionModel.c:", ids, "\" S=\"@ucldStdev.c:", ids, "\" meanInRealSpace=\"true\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:184:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L184) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <parameter id=\"RealParameter.1\" estimate=\"false\" lower=\"0.0\" name=\"M\" upper=\"1.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:186:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_distribution.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"ucldMean.c:", ids, "\" estimate=\"false\" name=\"clock.rate\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"BayesianSkyline.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:74:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L74) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"rate.c:", ids, "\" spec=\"beast.evolution.branchratemodel.RateStatistic\" branchratemodel=\"@RelaxedClock.c:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <logger id=\"treelog.t:", ids, "\" fileName=\"$(tree).trees\" logEvery=\"1000\" mode=\"tree\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"TreeWithMetaDataLogger.t:", ids, "\" spec=\"beast.evolution.tree.TreeWithMetaDataLogger\" ", "tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:93:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_loggers.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"TreeWithMetaDataLogger.t:", ids, "\" spec=\"beast.evolution.tree.TreeWithMetaDataLogger\" branchratemodel=\"@RelaxedClock.c:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:38:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L38) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"YuleBirthRateScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@birthRate.t:", ids, "\" scaleFactor=\"0.75\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeScaler.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeRootScaler.t:",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "UniformOperator.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "SubtreeSlide.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "Narrow.t:", ids, "\" spec=\"Exchange\" tree=\"@Tree.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "WilsonBalding.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"KappaScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:81:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:82:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:86:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L86) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa1Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa1.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:88:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa2Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa2.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:95:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L95) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateACScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAC.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:97:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateAGScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAG.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:99:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateATScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAT.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:101:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateCGScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateCG.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:103:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateGTScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateGT.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:105:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L105) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:106:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L106) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:127:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"popSizesScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@bPopSizes.t:", ids, "\" scaleFactor=\"0.75\" weight=\"15.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:129:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L129) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"groupSizesDelta.t:", ids, "\" spec=\"DeltaExchangeOperator\" integer=\"true\" weight=\"6.0\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:130:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L130) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <intparameter idref=\"bGroupSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:137:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L137) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"ucldStdevScaler.c:", ids, "\" spec=\"ScaleOperator\" parameter=\"@ucldStdev.c:", ids, "\" scaleFactor=\"0.5\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:139:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L139) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesRandomWalk.c:", ids, "\" spec=\"IntRandomWalkOperator\" parameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\" windowSize=\"1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:141:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L141) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesSwapOperator.c:", ids, "\" spec=\"SwapOperator\" intparameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:143:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_operators.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesUniform.c:", ids, "\" spec=\"UniformOperator\" parameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:41:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L41) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"birthRate.t:", ids, "\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDBirthRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"10000.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:44:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDDeathRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.5</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"popSize.t:", ids, "\" name=\"stateNode\">0.3</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:48:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"bPopSizes.t:", ids, "\" dimension=\"5\" lower=\"0.0\" name=\"stateNode\" upper=\"380000.0\">380.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"bGroupSizes.t:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"5\">1</stateNode>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:54:14:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L54) *warning:* **no visible global function definition for ‘get_kappa’**
```r
    kappa <- get_kappa(site_models)
             ^~~~~~~~~
```
[R/create_beast2_input_state.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">", kappa, "</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa1.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa2.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAC.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:64:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L64) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateCG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateGT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:72:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L72) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"ucldStdev.c:", ids, "\" lower=\"0.0\" name=\"stateNode\">0.1</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/e8df9aa8056e5fe8c2e4749289f1a24ad351df25/R/create_beast2_input_state.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"rateCategories.c:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"8\">1</stateNode>"))


@adeas31 QStringLiteral is a Qt5 macro and will not work on Qt4. (e.g. OSX)!


@klarstrup We should probably agree on indentation level. I propose 4 but I can see you're using 2 here.


You could remove the comment `(in many cases the browser will have done that already)` as you disabled that behavior altogether.


@gigaherz said:

> it's just missing a "if (!NT_SUCCESS(Status)) do something"
> reusing the Status variable is perfectly fine


@dvyukov @krytarowski
Request to review. Please let me know if I'm doing anything wrong. I'll add more descriptions soon.
NB: I'd like to know about the naming convention. How should I name these text files? Are these okay?


I also noticed that the name length limit does apply for sql dbms, but not for other implementations.


Wrong issue referenced in commit. Actually fixes #254


Should be like this:
- inria = InriaToJson()
- inrial.parse(arguments)

To many lines in main (this should be processed by another function or class)


This should be done in one line : learn map function


Тип добавить тесты на конструкторы с дефолтным значением, или этот тест просто лишний?
Тест на конструкторы с дефолтным значением вроде бы не нужны потому что дефолтное значение вообще пропасть и тест будет тупо падать.


Too many lines (same as in Inria commit)


Why?


Review that commit @kyoma. The idea is to optimize OnCombatEvent callback so if we r already inside vHoF there is no neeed to check if notification is for vMA or vSO etc.


Too many lines of code (too many logic in here). Same as in Inria commit


tg


good


Same as in all scripts. Too many lines


I just returned the values to "52".
I do not know what the consequences of this will be, but it works.


@cebe could you create issues in ext. repos? Thanks.


処理のフローはOKです 👍

これを、以下の要領で書き直してみてください。

1. 現状だとすべて上から下に向かって処理が流れるだけになっているので、これを反復処理・条件判断を使ってまとまりを作りましょう。

2. 反復処理、条件判断を行うにあたって、必要に応じて変数（領域）を用意しましょう。例えば、比較する２つの数をその都度 x と y に代入しておけば、「 x と y を比較する」と書くだけで個々の具体的な値について適用することができます。

ここは少し難しいところだと思いますので、分からなければ気軽に質問してくださいね ⭐


test


hahahahah


Ich würde den Begriff als Eigenname einordnen und somit nicht speziell übersetzen, belasse es wie du es aktuell übersetzt hast.


Hi charlievieth, is this job only available for existent user?


It's possible, but the corresponding case looks very rare and somewhat questionable in nature: pass callable reference to an object member imported into file scope as an argument to super class constructor or an interface delegate initializer.
Example:
```kotlin
package test

import kotlin.reflect.KProperty
import test.Derived.p

open class Base(val prop: KProperty<*>)

object Derived : Base(::p) {
    val p = 42
}
```


because its asking if you want to apply and only after you agreed, you'll notice that there is a problem, which results in a possible inconsistent database state. We can error about the length before doing anthing on the DB.


A quick solution could be to add this in appropriate place?
```
#if (QT_VERSION >= QT_VERSION_CHECK(5, 0, 0))
#define QStringLiteral QString::fromUtf8
#endif
```


i have also included many comments, react to it asap.
expecting for more programs for review, load me with your work...


Looking at https://raw.githubusercontent.com/project-everest/ci-logs/master/fstar-nightly-512b4359-13758.err it seems it's one of the usual stack exhaustion problems that sometimes happens with mono. The fix is super simple, and it's documented since 3+ years: `ulimit -s unlimited`
https://github.com/FStarLang/FStar/blob/master/INSTALL.md#on-linux-or-mac-os-x-using-mono


This is not enough because `parent_notation` is still used to link to a broader concept but `153` does not contain the `control_number`. If URIs are based on `control_number`, links to broader concepts should only come from 5XX fields (see #31).


Fixes #234


Commit Message is not correct, I added PMD and FindBugs


2. right. Now I see what you want to achieve. I have to admit I didn't think about that kind of workflow, however, in this use case it makes sense to open the current folder. I think a mix of your solution and mine would be nice. If qgis is launched "normally", i.e. via UI/Shortcut it shows the sample data folder and if qgis is launched via shell in a specific folder, that folder should be taken. Don't know yet how to implement that.


The `posix_fs.txt` and `posix_mm.txt` names come from my experiment of sharing some descriptions between OSes (linux/freebsd/netbsd/darwin all support a common posix subset). But the experiment failed so far. I think it's better to name them as `fs.txt` and `mm.txt` for now.

Also please add the following so that we keep them formatted:
```
--- a/Makefile
+++ b/Makefile
@@ -201,6 +201,7 @@ format: bin/syz-fmt
        clang-format --style=file -i executor/*.cc executor/*.h tools/kcovtrace/*.c
        bin/syz-fmt sys/akaros
        bin/syz-fmt sys/freebsd
+       bin/syz-fmt sys/netbsd
        bin/syz-fmt sys/linux
        bin/syz-fmt sys/fuchsia
        bin/syz-fmt sys/windows
```

Otherwise looks good.

I think it makes sense to get other pieces working before adding more descriptions (on top of this). We need sys/syz-extract/netbsd.go, the *const files, sys/netbsd/init.go and few bits in sys/targets/targets.go.


why you add a new line?


Congrats!


I see, so all this extra properties in ValidateFunction have to be optional. @Delagen will you make a PR?


I agree that is it always better to avoid additional dependencies.
Anyway, are you sure that there is no clean way to detect the directory using Windows API?
Using Posix API inside Windows code looks weird.


IMO, reimplementing `AtomicInteger` using `syncrhonized` block is not a good idea. Let me include all necessary classes into TeaVM class library and you'll be able to revert most of this commit.


Ok, gracias


No, it won't result in any inconsistent state. It will apply migrations that are of correct lengths and will fail on the one with too long name without applying it.


the first example I have tried was pseudo klienian 009 MC dof, this is not suitable for running as a c++ example. I am wondering if they should be in a section called OpenCL Only examples h'mm??


処理のフローは OK です 👍

以下の要領で書き直してみてください。

1. 「８の数字を探し、一致したら終了」とありますが、ここは反復処理となるように記述を工夫しましょう。
2.  ８の数字と一致するか否かについては、条件判断を使って記述しましょう。
3. 上記の２点を満たすために、必要に応じて変数（領域）を使いましょう。

ここは少し難しいところですので、分からなければ質問してください ⭐


No problem. Of course we can always push back and re-instate some of the of courses :) and we do not have to slavishly follow every word of the review. If you let me know which of the casualties in this purge were excessive collateral I'll happily re-instate them, given sufficient justification.

But overall I think the changes represented in this commit are an improvement.


#hacktobershirt


I didn't release a new version. Have sense release a new breaking version?


Here is a sample Procfile for a NodeJS app:


Was thinking: it may be worth explicitly saying this can be done with the `w` argument but hopefully it's self-explanatory to readers who've made it to this point in the book!


from the outside (same mechanism than for web containers).


yes, but we know the problem before, so it should be checked in 192 instead of here. Will prepare a pull request.


do you mean do the mirroring in this specific case?


tu incrémente deux fois cardIndex ?


This breaks the shadow (at lease on Android unless `fixNativeFeedbackRadius = true`


Bluemix [toolchain](https://console.bluemix.net/devops/toolchains/73511828-153e-4116-982d-cd7af20ed76d "HULUpload"): [Delivery Pipeline](https://console.bluemix.net/devops/pipelines/790ac3cd-a474-4b62-92f0-a8d134917190 "HULUploads") deployed [HULUpload](https://github.com/tinusm/HULUpload/releases/tag/deploy-ibm-yp-us-south-TEAM17040311301800949-cloudnative-dev-20171024-085034 "deploy-ibm-yp-us-south-TEAM17040311301800949-cloudnative-dev-20171024-085034") to [cloudnative-dev](https://console.bluemix.net/apps/fe4ed76f-15d6-45ae-b390-3bc19e83ee67?env_id=ibm:yp:us-south "ibm:yp:us-south:TEAM17040311301800949:cloudnative-dev"), including this commit