[R/create_beast2_input_data.R:26:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_data.R#L26) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_data_sequences <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:10:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L10) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_distribution <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:23:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L23) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"YuleModel.t:", ids, "\" spec=\"beast.evolution.speciation.YuleModel\" birthDiffRate=\"@birthRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:24:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L24) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"YuleBirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@birthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:25:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.1\" name=\"distr\" upper=\"Infinity\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:28:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BirthDeath.t:", ids, "\" spec=\"beast.evolution.speciation.BirthDeathGernhard08Model\" birthDiffRate=\"@BDBirthRate.t:", ids, "\" relativeDeathRate=\"@BDDeathRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:29:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L29) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"BirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDBirthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:30:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L30) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.3\" name=\"distr\" upper=\"1000.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:32:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"DeathRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDDeathRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:33:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.4\" name=\"distr\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:36:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"CoalescentConstant.t:", ids, "\" spec=\"Coalescent\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:37:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L37) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <populationModel id=\"ConstantPopulation.t:", ids, "\" spec=\"ConstantPopulation\" popSize=\"@popSize.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:50:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BayesianSkyline.t:", ids, "\" spec=\"BayesianSkyline\" groupSizes=\"@bGroupSizes.t:", ids, "\" popSizes=\"@bPopSizes.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <treeIntervals id=\"BSPTreeIntervals.t:", ids, "\" spec=\"TreeIntervals\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:53:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L53) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"MarkovChainedPopSizes.t:", ids, "\" spec=\"beast.math.distributions.MarkovChainDistribution\" jeffreys=\"true\" parameter=\"@bPopSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"KappaPrior.s:", ids, "\" name=\"distribution\" x=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.1\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:61:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa1Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa1.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.4\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:71:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa2Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:72:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L72) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.5\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:74:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L74) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.6\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:78:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateACPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAC.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:80:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L80) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.7\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:81:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.8\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:84:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L84) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateAGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:86:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L86) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.9\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.10\" estimate=\"false\" name=\"beta\">20.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateATPrior.s:", ids, "\" name=\"distribution\" x=\"@rateAT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:92:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L92) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.11\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:93:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.12\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:96:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateCGPrior.s:", ids, "\" name=\"distribution\" x=\"@rateCG.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:97:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.3\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:98:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L98) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.13\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:99:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.14\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:102:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L102) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"RateGTPrior.s:", ids, "\" name=\"distribution\" x=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:103:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.5\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:104:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.17\" estimate=\"false\" name=\"alpha\">0.05</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:105:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L105) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.18\" estimate=\"false\" name=\"beta\">10.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:111:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L111) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"ucldStdevPrior.c:", ids, "\" name=\"distribution\" x=\"@ucldStdev.c:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:112:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L112) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Gamma id=\"Gamma.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:113:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L113) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"alpha\">0.5396</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:114:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L114) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"beta\">0.3819</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:141:3:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L141) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/create_beast2_input_distribution.R:142:23:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L142) *warning:* **no visible global function definition for ‘get_prop_invariant’**
```r
    prop_invariant <- get_prop_invariant(site_models)
                      ^~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:146:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L146) *style:* **Lines should not be more than 80 characters.**
```r
      "name=\"proportionInvariant\" upper=\"1.0\">", prop_invariant, "</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:158:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L158) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"JC69.s:", ids, "\" spec=\"JukesCantor\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:160:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L160) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"hky.s:", ids, "\" spec=\"HKY\" kappa=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:161:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L161) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:164:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L164) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"tn93.s:", ids, "\" spec=\"TN93\" kappa1=\"@kappa1.s:", ids, "\" kappa2=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:165:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L165) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:168:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L168) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"gtr.s:", ids, "\" spec=\"GTR\" rateAC=\"@rateAC.s:", ids, "\" rateAG=\"@rateAG.s:", ids, "\" rateAT=\"@rateAT.s:", ids, "\" rateCG=\"@rateCG.s:", ids, "\" rateGT=\"@rateGT.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:169:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L169) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <parameter id=\"rateCT.s:", ids, "\" estimate=\"false\" lower=\"0.0\" name=\"rateCT\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:170:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L170) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:178:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L178) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <branchRateModel id=\"StrictClock.c:", ids, "\" spec=\"beast.evolution.branchratemodel.StrictClockModel\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:185:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L185) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <branchRateModel id=\"RelaxedClock.c:", ids, "\" spec=\"beast.evolution.branchratemodel.UCRelaxedClockModel\" rateCategories=\"@rateCategories.c:", ids, "\" tree=\"@Tree.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:186:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <LogNormal id=\"LogNormalDistributionModel.c:", ids, "\" S=\"@ucldStdev.c:", ids, "\" meanInRealSpace=\"true\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:187:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L187) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <parameter id=\"RealParameter.1\" estimate=\"false\" lower=\"0.0\" name=\"M\" upper=\"1.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:189:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_distribution.R#L189) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"ucldMean.c:", ids, "\" estimate=\"false\" name=\"clock.rate\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"BayesianSkyline.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:74:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L74) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"rate.c:", ids, "\" spec=\"beast.evolution.branchratemodel.RateStatistic\" branchratemodel=\"@RelaxedClock.c:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <logger id=\"treelog.t:", ids, "\" fileName=\"$(tree).trees\" logEvery=\"1000\" mode=\"tree\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"TreeWithMetaDataLogger.t:", ids, "\" spec=\"beast.evolution.tree.TreeWithMetaDataLogger\" ", "tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:93:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_loggers.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log id=\"TreeWithMetaDataLogger.t:", ids, "\" spec=\"beast.evolution.tree.TreeWithMetaDataLogger\" branchratemodel=\"@RelaxedClock.c:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:38:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L38) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"YuleBirthRateScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@birthRate.t:", ids, "\" scaleFactor=\"0.75\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeScaler.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeRootScaler.t:",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "UniformOperator.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "SubtreeSlide.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "Narrow.t:", ids, "\" spec=\"Exchange\" tree=\"@Tree.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "WilsonBalding.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"KappaScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:81:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:82:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:86:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L86) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa1Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa1.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:88:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa2Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa2.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:90:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:91:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L91) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:95:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L95) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateACScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAC.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:97:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateAGScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAG.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:99:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateATScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateAT.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:101:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateCGScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateCG.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:103:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"RateGTScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@rateGT.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:105:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L105) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:106:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L106) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:127:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"popSizesScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@bPopSizes.t:", ids, "\" scaleFactor=\"0.75\" weight=\"15.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:129:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L129) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"groupSizesDelta.t:", ids, "\" spec=\"DeltaExchangeOperator\" integer=\"true\" weight=\"6.0\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:130:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L130) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <intparameter idref=\"bGroupSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:137:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L137) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"ucldStdevScaler.c:", ids, "\" spec=\"ScaleOperator\" parameter=\"@ucldStdev.c:", ids, "\" scaleFactor=\"0.5\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:139:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L139) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesRandomWalk.c:", ids, "\" spec=\"IntRandomWalkOperator\" parameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\" windowSize=\"1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:141:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L141) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesSwapOperator.c:", ids, "\" spec=\"SwapOperator\" intparameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:143:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_operators.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"CategoriesUniform.c:", ids, "\" spec=\"UniformOperator\" parameter=\"@rateCategories.c:", ids, "\" weight=\"10.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:41:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L41) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"birthRate.t:", ids, "\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDBirthRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"10000.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:44:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDDeathRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.5</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"popSize.t:", ids, "\" name=\"stateNode\">0.3</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:48:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"bPopSizes.t:", ids, "\" dimension=\"5\" lower=\"0.0\" name=\"stateNode\" upper=\"380000.0\">380.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:49:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"bGroupSizes.t:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"5\">1</stateNode>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:54:14:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L54) *warning:* **no visible global function definition for ‘get_kappa’**
```r
    kappa <- get_kappa(site_models)
             ^~~~~~~~~
```
[R/create_beast2_input_state.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">", kappa, "</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa1.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa2.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAC.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:64:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L64) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateCG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:66:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L66) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateGT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:67:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L67) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:72:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L72) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"ucldStdev.c:", ids, "\" lower=\"0.0\" name=\"stateNode\">0.1</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:73:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_beast2_input_state.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"rateCategories.c:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"8\">1</stateNode>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_clock_model.R:33:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_clock_model.R#L33) *warning:* **no visible global function definition for ‘create_clock_model’**
```r
  return(create_clock_model(name = "relaxed_log_normal"))
         ^~~~~~~~~~~~~~~~~~
```
[R/create_site_model.R:34:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_site_model.R#L34) *warning:* **no visible global function definition for ‘create_site_model’**
```r
  return(create_site_model(name = "JC69"))
         ^~~~~~~~~~~~~~~~~
```
[R/create_site_model.R:63:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_site_model.R#L63) *warning:* **no visible global function definition for ‘create_site_model’**
```r
  return(create_site_model(name = "TN93"))
         ^~~~~~~~~~~~~~~~~
```
[R/create_site_model.R:70:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_site_model.R#L70) *warning:* **no visible global function definition for ‘create_site_model’**
```r
  return(create_site_model(name = "GTR"))
         ^~~~~~~~~~~~~~~~~
```
[R/create_tree_prior.R:34:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_tree_prior.R#L34) *warning:* **no visible global function definition for ‘create_tree_prior’**
```r
  return(create_tree_prior(name = "yule"))
         ^~~~~~~~~~~~~~~~~
```
[R/create_tree_prior.R:41:10:](https://github.com/richelbilderbeek/beastscriptr/blob/f1b258e716050aa3634e4343bb7bbb68d3697e6e/R/create_tree_prior.R#L41) *warning:* **no visible global function definition for ‘create_tree_prior’**
```r
  return(create_tree_prior(name = "birth_death"))
         ^~~~~~~~~~~~~~~~~
```


o


Yoba?


This is much slower and resource intensive for server as using sql.


不應該在 ProcessConfigs() 去塞 count
而是應該在 Count 的  getter() 去回傳 this.configs.count;


:-( so much for search-and-replace ...


Signed-off-by: Ramesha Karunasena <ramesha.karu@gmail.com> (github: github_handle)


@Awzaw
sorry to post here, no issue button
TypeError: "Return value of CustomAlerts\Commands\Commands::onCommand() must be of the type boolean, none returned" (EXCEPTION) in "CustomAlerts_dev-1.phar/src/CustomAlerts/Commands/Commands" at line 89

see attached file
[customalertsissue.txt](https://github.com/poggit-orphanage/CustomAlerts/files/1410274/customalertsissue.txt)

thanks


echt wel? voor import en local development :) ?


Fixed in 433b00a0d.


Signed-off-by: Ramesha Karunasena ramesha.karu@gmail.com (github: github_handle)


top!


В целом решение работоспособное и написано довольно компактно.
Если вдруг возникнет необходимость повысить производительность - необходимо проанализировать текущий алгоритм.
12 строка:
- Проверка с использованием регулярного выражения и выполняется за линейное время от количества символов o(N).

13 строка:
- Создание StringBuilder - выделение o(N) памяти
- Копирование из исходной строки во внутренний буфер
- Вызов метода reverse - o(N) операций для обращения строки
- Вызов метода toString - выделение o(N) памяти
- Копирование из внутреннего буфера StringBuilder в создаваемую строку

14 строка:
- Вызов метода equals для двух строк - o(N) операций попарного сравнения символов

Общая сложность алгоритма равна o(N)

Можно оптимизировать до фиксированной сложности Θ(N/2)


whoops :)


Yes this is what a data-structure class means @Creeperface01


property 應該是 readonly
規格


List 應為 private


不須特別寫入，而應該使用 Count 的  getter 去讀取


If "commit" is true the file is really deleted and notifications are sent, else the file is moved into the thrash bin and notifications are not sent.


應為 readonly


This is forcing a gradle plugin for 3.0 and up, even on the main branch. Would be nice if you can update that
"Error:This Gradle plugin requires Studio 3.0 minimum"


Покрытие тестами не полное)
Как будет работать при отсутствии палиндромов, при одном, при трех...?


I don't have info about all quests, but I see 4. The ones you mentioned and [quest 5713](http://www.wowhead.com/quest=5713/one-shot-one-kill).


應為 private


consistent


應使用 Counter 的 getter


I believe you only need to update the build number once a package has been published for the current version (and if updating the recipe for a new version, the build number should be reset to zero)

i.e. Right now the recipe has not been published, so leave the build number as zero.


how can i become a good programer


Are lines 98 and 99 necessary? Line 101 seems to be doing its own thing. Also, it's not clear why you're creating two Accountowner objects. Can you not run line 32 before line 31? Also, the commit message doesn't mention getNextIdintTest.

Speaking of, I believe the convention is for the test methods to end in the particle 'Test.' I think that's what Professor DiGiorgio askedus to do.