[R/create_beast2_input_beast.R:28:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_beast.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
    "namespace=\"beast.core:beast.evolution.alignment:beast.evolution.tree.coalescent:beast.core.util:beast.evolution.nuc:beast.evolution.operators:beast.evolution.sitemodel:beast.evolution.substitutionmodel:beast.evolution.likelihood\" ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:12:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_data.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("id=\"", beastscriptr::get_file_base_sans_ext(input_fasta_filenames), "\""))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:14:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_data.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, beastscriptr::create_beast2_input_data_sequences(input_fasta_filenames = input_fasta_filenames))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_data.R:22:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_data.R#L22) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_data_sequences <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:8:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L8) *style:* **Variable and function names should not be longer than 30 characters.**
```r
create_beast2_input_distribution <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:20:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L20) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"YuleModel.t:", ids, "\" spec=\"beast.evolution.speciation.YuleModel\" birthDiffRate=\"@birthRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:21:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L21) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"YuleBirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@birthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:22:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L22) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.1\" name=\"distr\" upper=\"Infinity\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:25:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BirthDeath.t:", ids, "\" spec=\"beast.evolution.speciation.BirthDeathGernhard08Model\" birthDiffRate=\"@BDBirthRate.t:", ids, "\" relativeDeathRate=\"@BDDeathRate.t:", ids, "\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:26:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L26) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"BirthRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDBirthRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:27:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L27) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.3\" name=\"distr\" upper=\"1000.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:29:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L29) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"DeathRatePrior.t:", ids, "\" name=\"distribution\" x=\"@BDDeathRate.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:30:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L30) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <Uniform id=\"Uniform.4\" name=\"distr\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:33:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"CoalescentConstant.t:", ids, "\" spec=\"Coalescent\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:34:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L34) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <populationModel id=\"ConstantPopulation.t:", ids, "\" spec=\"ConstantPopulation\" popSize=\"@popSize.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:47:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"BayesianSkyline.t:", ids, "\" spec=\"BayesianSkyline\" groupSizes=\"@bGroupSizes.t:", ids, "\" popSizes=\"@bPopSizes.t:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:48:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <treeIntervals id=\"BSPTreeIntervals.t:", ids, "\" spec=\"TreeIntervals\" tree=\"@Tree.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:50:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <distribution id=\"MarkovChainedPopSizes.t:", ids, "\" spec=\"beast.math.distributions.MarkovChainDistribution\" jeffreys=\"true\" parameter=\"@bPopSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"KappaPrior.s:", ids, "\" name=\"distribution\" x=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.0\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.1\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.2\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa1Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa1.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.1\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:64:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L64) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.3\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:65:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.4\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("            <prior id=\"kappa2Prior.s:", ids, "\" name=\"distribution\" x=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:69:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L69) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                <LogNormal id=\"LogNormalDistributionModel.2\" name=\"distr\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:70:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.5\" estimate=\"false\" name=\"M\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:71:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <parameter id=\"RealParameter.6\" estimate=\"false\" name=\"S\">1.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:102:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L102) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"JC69.s:", ids, "\" spec=\"JukesCantor\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:104:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"hky.s:", ids, "\" spec=\"HKY\" kappa=\"@kappa.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:105:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L105) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:108:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L108) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                    <substModel id=\"tn93.s:", ids, "\" spec=\"TN93\" kappa1=\"@kappa1.s:", ids, "\" kappa2=\"@kappa2.s:", ids, "\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_distribution.R:109:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_distribution.R#L109) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("                        <frequencies id=\"estimatedFreqs.s:", ids, "\" spec=\"Frequencies\" frequencies=\"@freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_loggers.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"BayesianSkyline.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:53:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_loggers.R#L53) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_loggers.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_loggers.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <log idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:35:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L35) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"YuleBirthRateScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@birthRate.t:", ids, "\" scaleFactor=\"0.75\" weight=\"3.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:40:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeScaler.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "TreeRootScaler.t:",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:52:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "UniformOperator.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:57:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L57) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"", operator_id_pre, "SubtreeSlide.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "Narrow.t:", ids, "\" spec=\"Exchange\" tree=\"@Tree.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:70:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
  text <- c(text, paste0("    <operator id=\"", operator_id_pre, "WilsonBalding.t:", ids,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:76:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L76) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"KappaScaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:78:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:79:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L79) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:83:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L83) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa1Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa1.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"kappa2Scaler.s:", ids, "\" spec=\"ScaleOperator\" parameter=\"@kappa2.s:", ids, "\" scaleFactor=\"0.5\" weight=\"0.1\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:87:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"FrequenciesExchanger.s:", ids, "\" spec=\"DeltaExchangeOperator\" delta=\"0.01\" weight=\"0.1\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:88:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter idref=\"freqParameter.s:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:109:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L109) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"popSizesScaler.t:", ids, "\" spec=\"ScaleOperator\" parameter=\"@bPopSizes.t:", ids, "\" scaleFactor=\"0.75\" weight=\"15.0\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:111:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L111) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("    <operator id=\"groupSizesDelta.t:", ids, "\" spec=\"DeltaExchangeOperator\" integer=\"true\" weight=\"6.0\">"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_operators.R:112:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_operators.R#L112) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <intparameter idref=\"bGroupSizes.t:", ids, "\"/>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:38:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L38) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"birthRate.t:", ids, "\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:40:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDBirthRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"10000.0\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:41:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L41) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"BDDeathRate.t:", ids, "\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.5</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:43:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"popSize.t:", ids, "\" name=\"stateNode\">0.3</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:45:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"bPopSizes.t:", ids, "\" dimension=\"5\" lower=\"0.0\" name=\"stateNode\" upper=\"380000.0\">380.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:46:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <stateNode id=\"bGroupSizes.t:", ids, "\" spec=\"parameter.IntegerParameter\" dimension=\"5\">1</stateNode>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:52:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:54:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L54) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa1.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:55:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L55) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"kappa2.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">2.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:56:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:58:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L58) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAC.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:59:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L59) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:60:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateAT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:61:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateCG.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:62:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"rateGT.s:", ids, "\" lower=\"0.0\" name=\"stateNode\">1.0</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_beast2_input_state.R:63:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/create_beast2_input_state.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    text <- c(text, paste0("        <parameter id=\"freqParameter.s:", ids, "\" dimension=\"4\" lower=\"0.0\" name=\"stateNode\" upper=\"1.0\">0.25</parameter>"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_cbs_tree_prior.R:2:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/is_cbs_tree_prior.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @param x an object, to be determined if it is a valid constant coalescent Bayesian skyline prior
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_cbs_tree_prior.R:3:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/is_cbs_tree_prior.R#L3) *style:* **Lines should not be more than 80 characters.**
```r
#' @return TRUE if x is a valid constant coalescent Bayesian skyline prior, FALSE otherwise
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_ccp_tree_prior.R:2:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/is_ccp_tree_prior.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @param x an object, to be determined if it is a valid constant coalescence population tree prior
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/is_ccp_tree_prior.R:3:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/R/is_ccp_tree_prior.R#L3) *style:* **Lines should not be more than 80 characters.**
```r
#' @return TRUE if x is a valid constant coalescence population tree prior, FALSE otherwise
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input_data.R:8:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input_data.R#L8) *style:* **Lines should not be more than 80 characters.**
```r
  expected <- "                    <sequence id=\"seq_t1\" taxon=\"t1\" totalcount=\"4\" value=\"acttgttgcgactgcgcctg\"/>"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input_data.R:19:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input_data.R#L19) *style:* **Lines should not be more than 80 characters.**
```r
  expected <- "                    <sequence id=\"seq_t1\" taxon=\"t1\" totalcount=\"4\" value=\"acttgttgcgactgcgcctg\"/>"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:51:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:68:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "birth_death_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:82:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    tree_priors = beastscriptr::create_tree_prior(name = "coalescent_constant_population")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:85:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L85) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "coalescent_constant_population_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:101:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "yule_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:114:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L114) *style:* **Lines should not be more than 80 characters.**
```r
    tree_priors = beastscriptr::create_tree_prior(name = "coalescent_bayesian_skyline")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:117:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "coalescent_bayesian_skyline_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:128:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L128) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "jc69_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:139:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L139) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "hky_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:150:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L150) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "tn93_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-create_beast2_input.R:163:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-create_beast2_input.R#L163) *style:* **Lines should not be more than 80 characters.**
```r
  expected_lines <- readLines(system.file("extdata", "gtr_2_4.xml", package = "beastscriptr"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-is_yule_tree_prior.R:6:1:](https://github.com/richelbilderbeek/beastscriptr/blob/f8db16bbc075695e5a8340620ba8c11cb42bf7c4/tests/testthat/test-is_yule_tree_prior.R#L6) *style:* **Lines should not be more than 80 characters.**
```r
  testthat::expect_false(is_yule_tree_prior(create_tree_prior(name = "birth_death")))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```


мб конструктор ёбнуть?


Do anyone know, why code do second GETSTATIC here? Looks like using DUP should be better in this case.


Hi Thiago,

great job, thank you! That is almost exactly what I was looking for.
May I provide an improvement, because unmask seems not to work for bigger numbers. And sorry, I just have no time to fork your solution correctly ( with all this Github-things & so on )

`function unmaskValue(value) {
          if (settings.decimal === ',') {
              value = value.replace(/[,.]/g, function (m) {
                  // m is the match found in the string
                  // If `,` is matched return `.`, if `.` matched return `,`
                  return m === ',' ? '.' : '';
              });

              value = parseFloat(value);
          } else {
              return value.replace(new RegExp('\\'+settings.thousands, 'g'), '');
          }

          return value;
      }`

Also to mask bigger numbers after losing focus, try the code below in -checkValue function
`        //if (Number(val).toString() !== returnval.toString()) {
          originalinput.val(maskValue(returnval));
          originalinput.trigger('change');
        //}`

At the end: if initialize with numbers in "en-US" format, but using the "," decimal separator,  the input value can/should be masked, may be sowewhere in the Init()-function, right after `_setInitval();`. At least it works for me.


If someone interested, these updates seems fix transifex
https://github.com/it-projects-llc/maintainer-quality-tools/compare/de489abdab704d312138dd01f06c5f41403e90d8...028d1392632fc60e01dddf9aaeb2395fdd2e0a2d


need to remove the .tga extension from icon. I've done a couple more RP spells, modified tlk file as well. Will submit new versions of both tlk and spells.2da to FoamBats4All


@JordanMajd thanks to point this out. A new version including this fix will be online tomorrow.

Cheers


@adrianw thanks to point this out. New version including this fix will be online tomorrow.

Cheers


this is odd, why is fancy title writing directly and needing to check readonly? That seems like such a weird place to have a direct DB write.


no! I mean 0.5.0 was never released BEFORE the downgrade!  and it was not about updating version to what was in the readme, it was about being consistent before we release it
the completely other story is that we should not use the PATCH version if it's not a fix/patch release


Now that would be downright proactive!


Oh wow we have a whole FIELD just for the fancy title?? We actually keep the "raw" title around?? That is bizarre.


можно, ебнем