[inst/examples/example_distanceFromEachPoint.R:37:2:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/inst/examples/example_distanceFromEachPoint.R#L37) *style:* **Commented code should be removed.**
```r
#beginCluster(3) # can do parallel
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_distanceFromEachPoint.R:40:2:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/inst/examples/example_distanceFromEachPoint.R#L40) *style:* **Commented code should be removed.**
```r
#endCluster() # if beginCluster was run
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:82:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L82) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    if ( method != "RMexp") {
        ^
```
[R/initialize.R:237:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L237) *style:* **Variable or function name should be lowerCamelCase.**
```r
  X <- c(jitter(sort(rbeta(nPoints, betaPar, betaPar) * (maxX - minX) + minX)),
  ^
```
[R/initialize.R:239:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L239) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Y <- c(jitter(sort(rbeta(nPoints / 2, betaPar, betaPar) * (maxY - meanY) + meanY)),
  ^
```
[R/initialize.R:243:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L243) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Sr1 <- Polygon(cbind(X + xAdd, Y + yAdd))
  ^~~
```
[R/initialize.R:244:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L244) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Srs1 <- Polygons(list(Sr1), "s1")
  ^~~~
```
[R/initialize.R:341:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L341) *style:* **Commented code should be removed.**
```r
# ### INCORPORATE RELEVANT PARTS OF THIS OLD INIT FUNCTION INTO INITCOORDS()
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:346:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L346) *style:* **Commented code should be removed.**
```r
# #'                      (currently only \code{RasterLayer} or
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:347:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L347) *style:* **Commented code should be removed.**
```r
# #'                      \code{SpatialPolygonsDataFrame}) accepted.
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:357:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L357) *style:* **Commented code should be removed.**
```r
#     ext <- extent(agentlocation)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:359:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L359) *style:* **Commented code should be removed.**
```r
#       #            nonNAs <- !is.na(getvalue(probinit))
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:360:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L360) *style:* **Commented code should be removed.**
```r
#       nonNAs <- !is.na(getValues(probinit))
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:361:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L361) *style:* **Commented code should be removed.**
```r
#       wh.nonNAs <- which(nonNAs)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:362:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L362) *style:* **Commented code should be removed.**
```r
#       #            ProbInit.v <- cumsum(getvalue(probinit)[nonNAs])
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:363:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L363) *style:* **Commented code should be removed.**
```r
#       ProbInit.v <- cumsum(getValues(probinit)[nonNAs])
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:365:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L365) *style:* **Commented code should be removed.**
```r
#         ran <- runif(numagents,0,1)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:366:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L366) *style:* **Commented code should be removed.**
```r
#         fI <- findInterval(ran, ProbInit.v)+1
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:367:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L367) *style:* **Commented code should be removed.**
```r
#         fI2 <- wh.nonNAs[fI]
          ^~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:368:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L368) *style:* **Commented code should be removed.**
```r
#         last.ran <- runif(numagents,0,1)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:369:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L369) *style:* **Commented code should be removed.**
```r
#         last.fI <- findInterval(last.ran, ProbInit.v)+1
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:370:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L370) *style:* **Commented code should be removed.**
```r
#         last.fI2 <- wh.nonNAs[last.fI]
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:372:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L372) *style:* **Commented code should be removed.**
```r
#         #                va <- getvalue(probinit)[nonNAs]
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:373:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L373) *style:* **Commented code should be removed.**
```r
#         va <- getValues(probinit)[nonNAs]
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:374:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L374) *style:* **Commented code should be removed.**
```r
#         ran <- runif(length(va), 0, 1)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:375:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L375) *style:* **Commented code should be removed.**
```r
#         fI2 <- wh.nonNAs[ran<va]
          ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:377:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L377) *style:* **Commented code should be removed.**
```r
#         last.ran <- runif(length(fI2), 0, 1)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:378:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L378) *style:* **Commented code should be removed.**
```r
#         last.fI <- findInterval(last.ran, ProbInit.v) + 1
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:379:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L379) *style:* **Commented code should be removed.**
```r
#         last.fI2 <- wh.nonNAs[last.fI]
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:381:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L381) *style:* **Commented code should be removed.**
```r
#         #                last.ran <- runif(length(fI2),0,1)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:382:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L382) *style:* **Commented code should be removed.**
```r
#         #                last.fI2 <- wh.nonNAs[last.ran<va]
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:385:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L385) *style:* **Commented code should be removed.**
```r
#         position <- xyFromCell(agentlocation,fI2,spatial = TRUE)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:387:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L387) *style:* **Commented code should be removed.**
```r
#         position <- coordinates(agentlocation)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:389:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L389) *style:* **Commented code should be removed.**
```r
#         stop("need raster layer or Spatial Points object")
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:391:9:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L391) *style:* **Commented code should be removed.**
```r
#       numagents <- length(position)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:399:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L399) *style:* **Commented code should be removed.**
```r
#           colnames(xy) = c("x", "y")
            ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:400:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L400) *style:* **Commented code should be removed.**
```r
#           position <- SpatialPoints(xy)
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:401:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L401) *style:* **Commented code should be removed.**
```r
#           position <- SpatialPoints(sampleRandom(agentlocation, numagents, xy = TRUE, sp = TRUE))
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:403:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L403) *style:* **Commented code should be removed.**
```r
#           sam <- sample(1:length(agentlocation),numagents)
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:404:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L404) *style:* **Commented code should be removed.**
```r
#           position <- SpatialPoints(agentlocation[sam,])
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:406:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L406) *style:* **Commented code should be removed.**
```r
#           stop("need raster layer or Spatial Points object")
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:413:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L413) *style:* **Commented code should be removed.**
```r
#           position <- SpatialPoints(agentlocation)
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:415:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L415) *style:* **Commented code should be removed.**
```r
#           stop("need raster layer or Spatial Points object")
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:417:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L417) *style:* **Commented code should be removed.**
```r
#         numagents <- length(position)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:425:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L425) *style:* **Commented code should be removed.**
```r
#         numagents <- length(position)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:429:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L429) *style:* **Commented code should be removed.**
```r
#     stop("Need to provide agentlocation, which can be a map layer")
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:431:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L431) *style:* **Commented code should be removed.**
```r
#   heading1 <- runif(numagents, 0, 360)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:432:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L432) *style:* **Commented code should be removed.**
```r
#   distance <- runif(numagents, 0.1, 10)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:434:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L434) *style:* **Commented code should be removed.**
```r
#   .Object@ID <- as.character(1:numagents)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:435:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L435) *style:* **Commented code should be removed.**
```r
#   .Object@spatial <- position
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:436:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L436) *style:* **Commented code should be removed.**
```r
#   .Object@heading <- heading1
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:437:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L437) *style:* **Commented code should be removed.**
```r
#   .Object@distance <- distance
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/initialize.R:439:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/initialize.R#L439) *style:* **Commented code should be removed.**
```r
#   return(.Object)
    ^~~~~~~~~~~~~~~
```
[R/mapReduce.R:53:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/mapReduce.R#L53) *style:* **Variable or function name should be lowerCamelCase.**
```r
  BsumVec <- reduced[fullRasterVals] # join
  ^~~~~~~
```
[R/neighbourhood.R:112:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L112) *style:* **Variable or function name should be lowerCamelCase.**
```r
adj.raw <- function(x = NULL, cells, directions = 8, sort = FALSE, pairs = TRUE,
^~~~~~~
```
[R/neighbourhood.R:114:21:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L114) *style:* **Variable or function name should be lowerCamelCase.**
```r
                    match.adjacent = FALSE, cutoff.for.data.table = 2e3,
                    ^~~~~~~~~~~~~~
```
[R/neighbourhood.R:114:45:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L114) *style:* **Variable or function name should be lowerCamelCase.**
```r
                    match.adjacent = FALSE, cutoff.for.data.table = 2e3,
                                            ^~~~~~~~~~~~~~~~~~~~~
```
[R/neighbourhood.R:233:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L233) *style:* **Lines should not be more than 100 characters.**
```r
              ((adj[, "from"] %% numCol + adj[, "to"] %% numCol) == 1)) # | #right & left edge cells, with neighbours wrapped
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/neighbourhood.R:238:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L238) *style:* **Lines should not be more than 100 characters.**
```r
              ((adj[, "from"] %% numCol + adj[, "to"] %% numCol) == 1)) # | #right & left edge cells, with neighbours wrapped
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/neighbourhood.R:297:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L297) *style:* **Lines should not be more than 100 characters.**
```r
              ((from %% numCol + to %% numCol) == 1))# | #right & left edge cells, with neighbours wrapped
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/neighbourhood.R:813:29:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L813) *style:* **Variable or function name should be lowerCamelCase.**
```r
setGeneric("wrap", function(X, bounds, withHeading) {
                            ^
```
[R/neighbourhood.R:822:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L822) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds) {
                        ^
```
[R/neighbourhood.R:839:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L839) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds) {
                        ^
```
[R/neighbourhood.R:849:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L849) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds) {
                        ^
```
[R/neighbourhood.R:850:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L850) *style:* **Variable or function name should be lowerCamelCase.**
```r
    X <- wrap(X, bounds = extent(bounds))
    ^
```
[R/neighbourhood.R:859:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L859) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds) {
                        ^
```
[R/neighbourhood.R:860:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L860) *style:* **Variable or function name should be lowerCamelCase.**
```r
    X <- wrap(X, bounds = extent(bounds))
    ^
```
[R/neighbourhood.R:869:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L869) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds) {
                        ^
```
[R/neighbourhood.R:872:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L872) *style:* **Variable or function name should be lowerCamelCase.**
```r
      X <- wrap(X, bounds = extent(bounds))
      ^
```
[R/neighbourhood.R:884:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L884) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds, withHeading) {
                        ^
```
[R/neighbourhood.R:909:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L909) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds, withHeading) {
                        ^
```
[R/neighbourhood.R:910:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L910) *style:* **Variable or function name should be lowerCamelCase.**
```r
      X <- wrap(X, bounds = extent(bounds), withHeading = withHeading)
      ^
```
[R/neighbourhood.R:919:25:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L919) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(X, bounds, withHeading) {
                        ^
```
[R/neighbourhood.R:922:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L922) *style:* **Variable or function name should be lowerCamelCase.**
```r
      X <- wrap(X, bounds = extent(bounds), withHeading = withHeading)
      ^
```
[R/neighbourhood.R:1059:40:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/neighbourhood.R#L1059) *style:* **Commas should always have a space after.**
```r
  cc <- cbind(pureCircle2[, "x"] - xy[,"x"], pureCircle2[, "y"] - xy[, "y"])
                                       ^
```
[R/probability.R:41:35:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/probability.R#L41) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    1 / sqrt(var * 2 * pi) * exp(-((theta - mu + 2 * pi * k) ^ 2) / (2 * var))
                                  ^
```
[R/probability.R:44:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/probability.R#L44) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Next <- term(theta, mu, var, k)
  ^~~~
```
[R/probability.R:45:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/probability.R#L45) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Last <- Next
  ^~~~
```
[R/RcppExports.R:68:20:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/RcppExports.R#L68) *style:* **Variable or function name should be lowerCamelCase.**
```r
runifC <- function(N) {
                   ^
```
[R/RcppExports.R:71:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/RcppExports.R#L71) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/SELES.R:53:23:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/SELES.R#L53) *style:* **Variable or function name should be lowerCamelCase.**
```r
numAgents <- function(N, probInit) {
                      ^
```
[R/splitRaster.R:51:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/splitRaster.R#L51) *style:* **Lines should not be more than 100 characters.**
```r
  function(r, nx = 1, ny = 1, buffer = c(0, 0), path = file.path(getwd(), names(r)), cl, rType = "FLT4S") {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/splitRaster.R:111:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/splitRaster.R#L111) *style:* **Lines should not be more than 100 characters.**
```r
      clusterApplyLB(cl = cl, x = seq_along(extents), fun = croppy, e = extents, r = r, path = path, rType = rType)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread.R:538:8:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread.R#L538) *style:* **Commented code should be removed.**
```r
      #isNASpreadProb <- is.na(spreadProb[])
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread.R:540:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread.R#L540) *style:* **Commented code should be removed.**
```r
      #   isNASpreadProb <- is.na(spreadProb[])
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread.R:541:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread.R#L541) *style:* **Commented code should be removed.**
```r
      #   spreadProb[isNASpreadProb] <- 0L
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread.R:942:41:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread.R#L942) *style:* **Place a space before left parenthesis, except in a function call.**
```r
              notDupsEvents <- notDups[-(1:(nrSpreads - nrPotentials))]
                                        ^
```
[R/spread2.R:5:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L5) *style:* **Lines should not be more than 100 characters.**
```r
                           "quantityAdj", "quantityAdj2", "state", "size", "tooBigByNCells", "V1", "proportion"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:674:12:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L674) *style:* **Commented code should be removed.**
```r
          #pureCircle <- unique(pureCircle)
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:759:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L759) *style:* **Commented code should be removed.**
```r
          # colnamesDtPot <- colnames(dtPotential)
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:760:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L760) *style:* **Commented code should be removed.**
```r
          # ll <-  lapply(colnamesDtPot, function(x) dtPotential[[x]][!spreadProbNA])
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:761:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L761) *style:* **Commented code should be removed.**
```r
          # names(ll) <- colnamesDtPot
            ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:762:13:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L762) *style:* **Commented code should be removed.**
```r
          # dtPotential <- as.data.table(ll)
            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:772:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L772) *style:* **Lines should not be more than 100 characters.**
```r
                                                                   .I[sample.int(length(numNeighs), size = numNeighs, prob = spreadProbRel)],
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:787:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L787) *style:* **Variable or function name should be lowerCamelCase.**
```r
      NAaSP <- !is.na(actualSpreadProb)
      ^~~~~
```
[R/spread2.R:789:42:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L789) *style:* **Commas should always have a space after.**
```r
        dtPotential <- dtPotential[NAaSP,]
                                         ^
```
[R/spread2.R:830:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L830) *style:* **Lines should not be more than 100 characters.**
```r
        # this is to prevent overlap within an event... in some cases, overlap within event is desired, so skip this block
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:848:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L848) *style:* **Lines should not be more than 100 characters.**
```r
        #successCells <- na.omit(successCells[!dupsWithinDtPotential]) # remove the dupsWithinDtPotential
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/spread2.R:848:10:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/R/spread2.R#L848) *style:* **Commented code should be removed.**
```r
        #successCells <- na.omit(successCells[!dupsWithinDtPotential]) # remove the dupsWithinDtPotential
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-examples.R:3:47:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L3) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (grepl("VIC-", Sys.info()["nodename"]))  { # for debugging only
                                              ^
```
[tests/testthat/test-examples.R:4:11:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L4) *style:* **Commented code should be removed.**
```r
    cat("#START##############\n", file = tmpExFile, append = FALSE)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-examples.R:14:15:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L14) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
    setwd(owd)}
              ^
```
[tests/testthat/test-examples.R:16:46:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L16) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (grepl("VIC-", Sys.info()["nodename"])) { # for debugging only
                                             ^
```
[tests/testthat/test-examples.R:17:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L17) *style:* **Lines should not be more than 100 characters.**
```r
    cat(paste("All files exist: ", isTRUE(all(file.exists(exFiles))), "\n"), file = tmpExFile, append = TRUE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-examples.R:22:48:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-examples.R#L22) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if (grepl("VIC-", Sys.info()["nodename"])) { # for debugging only
                                               ^
```
[tests/testthat/test-mapReduce.R:23:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L23) *style:* **Commented code should be removed.**
```r
  #expect_equal(sort(unique(getValues(biomass))), sort(reducedDT$biomass))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:27:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L27) *style:* **Commented code should be removed.**
```r
#   library(data.table)
    ^~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:28:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L28) *style:* **Commented code should be removed.**
```r
#   library(raster)
    ^~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:31:6:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L31) *style:* **Commented code should be removed.**
```r
#    detach("package:data.table")
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:35:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L35) *style:* **Commented code should be removed.**
```r
#   ras <- raster(extent(0,15,0,15), res=1)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:36:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L36) *style:* **Commented code should be removed.**
```r
#   fullRas <- randomPolygons(ras, numTypes=5, speedup=1, p=0.3)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:37:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L37) *style:* **Commented code should be removed.**
```r
#   names(fullRas) <- "mapcodeAll"
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:38:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L38) *style:* **Commented code should be removed.**
```r
#   uniqueComms <- raster::unique(fullRas)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:42:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L42) *style:* **Commented code should be removed.**
```r
#     biomass=rnbinom(length(uniqueComms), mu=4000, 0.4)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:44:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L44) *style:* **Commented code should be removed.**
```r
#   biomass <- rasterizeReduced(reducedDT, fullRas, "biomass")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:46:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L46) *style:* **Commented code should be removed.**
```r
#   expect_equal(sort(unique(getValues(biomass))), sort(reducedDT$biomass))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:47:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L47) *style:* **Commented code should be removed.**
```r
#   expect_equal(length(unique(getValues(biomass))), length(unique(getValues(fullRas))))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:49:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L49) *style:* **Commented code should be removed.**
```r
#   setkey(reducedDT, biomass)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:50:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L50) *style:* **Commented code should be removed.**
```r
#   communities <- rasterizeReduced(reducedDT, fullRas, "communities")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:51:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L51) *style:* **Commented code should be removed.**
```r
#   expect_equal(sort(unique(getValues(communities))), sort(reducedDT$communities))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:52:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L52) *style:* **Commented code should be removed.**
```r
#   expect_equal(length(unique(getValues(communities))), length(unique(getValues(fullRas))))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:56:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L56) *style:* **Commented code should be removed.**
```r
#   library(data.table)
    ^~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:57:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L57) *style:* **Commented code should be removed.**
```r
#   library(raster)
    ^~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:60:6:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L60) *style:* **Commented code should be removed.**
```r
#    detach("package:data.table")
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:64:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L64) *style:* **Commented code should be removed.**
```r
#   ras <- raster(extent(0, 15, 0, 15), res = 1)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:65:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L65) *style:* **Commented code should be removed.**
```r
#   fullRas <- randomPolygons(ras, numTypes = 5, speedup = 1, p = 0.3)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:67:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L67) *style:* **Commented code should be removed.**
```r
#   uniqueComms <- raster::unique(fullRas)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:71:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L71) *style:* **Commented code should be removed.**
```r
#     biomass=rnbinom(length(uniqueComms), mu = 4000, 0.4)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:73:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L73) *style:* **Commented code should be removed.**
```r
#   biomass <- rasterizeReduced(reducedDT, fullRas, "biomass")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:75:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L75) *style:* **Commented code should be removed.**
```r
#   setkey(reducedDT, biomass)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:76:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L76) *style:* **Commented code should be removed.**
```r
#   communities <- rasterizeReduced(reducedDT, fullRas, "communities")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:77:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L77) *style:* **Commented code should be removed.**
```r
#   expect_equal(sort(unique(getValues(communities))), sort(reducedDT$communities))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:81:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L81) *style:* **Commented code should be removed.**
```r
#   library(data.table)
    ^~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:82:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L82) *style:* **Commented code should be removed.**
```r
#   library(raster)
    ^~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:85:6:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L85) *style:* **Commented code should be removed.**
```r
#    detach("package:data.table")
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:89:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L89) *style:* **Commented code should be removed.**
```r
#   ras <- raster(extent(0,15,0,15), res=1)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:90:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L90) *style:* **Commented code should be removed.**
```r
#   fullRas <- randomPolygons(ras, numTypes=5, speedup=1, p=0.3)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:91:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L91) *style:* **Commented code should be removed.**
```r
#   names(fullRas) <- "mapcodeAll"
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:92:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L92) *style:* **Commented code should be removed.**
```r
#   uniqueComms <- raster::unique(fullRas)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:96:7:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L96) *style:* **Commented code should be removed.**
```r
#     biomass=rnbinom(length(uniqueComms), mu=4000, 0.4)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:98:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L98) *style:* **Commented code should be removed.**
```r
#   biomass <- rasterizeReduced(reducedDT, fullRas, "biomass")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:100:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L100) *style:* **Commented code should be removed.**
```r
#   setkey(reducedDT, biomass)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:101:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L101) *style:* **Commented code should be removed.**
```r
#   communities <- rasterizeReduced(reducedDT, fullRas, "communities")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mapReduce.R:102:5:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-mapReduce.R#L102) *style:* **Commented code should be removed.**
```r
#   expect_equal(length(unique(getValues(communities))), length(unique(getValues(fullRas))))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-randomPolygon.R:25:60:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-randomPolygon.R#L25) *style:* **Put spaces around all infix operators.**
```r
  expect_true(base::abs(base::abs(polyArea - area)) <  area/4) ## TODO: why is this area/4?
                                                          ~^~
```
[tests/testthat/test-splitRaster.R:140:38:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L140) *style:* **Commas should always have a space after.**
```r
  expect_identical(dataType(y4[[1]]),"INT1U")
                                     ^
```
[tests/testthat/test-splitRaster.R:155:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L155) *style:* **Lines should not be more than 100 characters.**
```r
    tmpdir <- file.path(tempdir(), "splitRaster-test-parallel") %>% reproducible::checkPath(create = TRUE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-splitRaster.R:158:8:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L158) *style:* **Commented code should be removed.**
```r
      #detach("package:raster")
       ^~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-splitRaster.R:216:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L216) *style:* **Lines should not be more than 100 characters.**
```r
  tmpdir <- file.path(tempdir(), "splitRaster-test-large") %>% reproducible::checkPath(create = TRUE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-splitRaster.R:254:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L254) *style:* **Commented code should be removed.**
```r
  #expect_equal(min(values(m)), min(values(r))) ## Error: cannot allocate vector of size 4.8 Gb
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-splitRaster.R:273:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L273) *style:* **Commented code should be removed.**
```r
  #expect_equal(max(values(m1)), max(values(r)))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-splitRaster.R:274:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-splitRaster.R#L274) *style:* **Commented code should be removed.**
```r
  #expect_equal(min(values(m1)), min(values(r)))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread.R:209:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread.R#L209) *style:* **Lines should not be more than 100 characters.**
```r
    if (interactive()) Plot(circEdge, addTo = "circs", cols = c("transparent", rainbow(numCircs)[whCirc]))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:148:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L148) *style:* **Commented code should be removed.**
```r
  #quickDT <- data.table(id = seq_along(sams), initialPixels = sams, key = "id")
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:150:4:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L150) *style:* **Commented code should be removed.**
```r
  #cirOut <- quickDT[cirOut, on = ]
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:473:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L473) *style:* **Lines should not be more than 100 characters.**
```r
  ##                                    expr       min        lq      mean   median        uq       max neval
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:474:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L474) *style:* **Lines should not be more than 100 characters.**
```r
  ##         iterativeFun(ras, FALSE, n, sp)  3.096979 12.642477  73.02248 35.17520  91.10528  764.4073   300
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:475:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L475) *style:* **Lines should not be more than 100 characters.**
```r
  ##      nonIterativeFun(ras, FALSE, n, sp)  1.509484  6.555565  31.18444 14.91066  42.78317  158.5237   300
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:476:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L476) *style:* **Lines should not be more than 100 characters.**
```r
  ##           origSpread(ras, FALSE, n, sp)  5.154006  7.555631  14.87158 11.49005  17.50599  231.5487   300
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:477:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L477) *style:* **Lines should not be more than 100 characters.**
```r
  ## origSpreadIterations(ras, FALSE, n, sp) 10.754669 51.524368 141.48620 93.61996 169.10808 2110.2683   300
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:688:38:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L688) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  ciCentre[seq_len(ncell(ciCentre))[-(ncell(ciCentre) / 2 - ncol(ciCentre) / 2)]] <- NA_integer_
                                     ^
```
[tests/testthat/test-spread2.R:884:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L884) *style:* **Lines should not be more than 100 characters.**
```r
                       spreadProb = 0.23, persistProb = 0, iterations = 10, directions = 8L, plot.it = FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:886:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L886) *style:* **Lines should not be more than 100 characters.**
```r
                      spreadProb = 0.23, persistProb = 0.8, iterations = 10, directions = 8L, plot.it = FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:891:3:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L891) *style:* **Variable or function name should be lowerCamelCase.**
```r
  M <- matrix(0.8, nrow = 50, ncol = 50)
  ^
```
[tests/testthat/test-spread2.R:898:35:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L898) *style:* **Put spaces around all infix operators.**
```r
  start <- c(50, length(landscape)-49)
                                 ~^~
```
[tests/testthat/test-spread2.R:902:1:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L902) *style:* **Lines should not be more than 100 characters.**
```r
                        spreadProb = 0.23, persistProb = persistRas, iterations = 10, directions = 8L,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-spread2.R:916:14:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L916) *style:* **Use <-, not =, for assignment.**
```r
  spreadProb = landscape
             ^
```
[tests/testthat/test-spread2.R:918:72:](https://github.com/PredictiveEcology/SpaDES.tools/blob/b4fd8b159c82a3af34c9099fd7a9fb6c3ffcb941/tests/testthat/test-spread2.R#L918) *style:* **Commas should always have a space after.**
```r
  expect_silent(spread2(landscape = landscape, spreadProb = spreadProb,start = start,
                                                                       ^
```


Springboard Assignment ch. 4


Just taking down the donate link 😄. On another note, seems like a few people fled Github.


Changed right arm and left arm commands due to Google Assistant not understanding. Fixed typo.


Thanks for picking up this project.

One suggestion: can you update the metadata for PyPi so the github link points to this fork instead of the original?


Hello - could you please explain this? I don't want to copy/past ;(


![](https://github.trello.services/images/mini-trello-icon.png) [Working](https://trello.com/c/f9bm8ey3/36-working)


158341011_Issue#6381 (lgu1234) - x86_64-Linux-Ubuntu-14.04-gcc-4.8-UnitTestsCoverage-Debug: OK (1679 of 1679 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-40.35%25-green.png)


huh, since when is glib required ? for what tool ? this dependency makes cross-compilation a lot more elaborate.


Oops, I of course ment for ``a<0``, not ``a<90`` as the commit is titled.


I think these lines should be:
```
?~(l.a & ?&((gor n.a n.l.a) $(a l.a, r `n.a)))
?~(r.a & ?&((gor n.a n.r.a) $(a r.a, l `n.a)))
```


响应对象


实体修改


x


I'll try to make it!


Feels so good to delete a line, eh?


I knew this was needed for some reason, just couldn't remember it. Thanks for pointing this out so quickly!


IBM Cloud [toolchain](https://console.bluemix.net/devops/toolchains/c245bd84-6f58-4ae6-bf21-6cc818366d29?env_id=ibm%3Ayp%3Aeu-gb "toolchain-9"): [Delivery Pipeline](https://console.bluemix.net/devops/pipelines/7043570b-6a41-482f-b0d9-1eb833eb64b7?env_id=ibm%3Ayp%3Aeu-gb "toolchain-9") deployed [toolchain-9](https://github.com/nkldn/toolchain-9/releases/tag/deploy-ibm-yp-eu-gb-nakul.dani-live.com-staging-20180614-100017 "deploy-ibm-yp-eu-gb-nakul.dani-live.com-staging-20180614-100017") to [staging](https://console.bluemix.net/apps/1434d959-359e-4ecc-a5db-e1d977f5cdcf?env_id=ibm:yp:eu-gb "ibm:yp:eu-gb:nakul.dani@live.com:staging"), including this commit


У методов должны быть имена объясняющие происходящее. Я не могу догадаться, что делает метод wow. Назови его пожалуйста так, что-б я понял что там происходит не смотря в то, как он написан


new image file uploaded


close #1


also, it would probably a good idea to use a regula falsi solver instead of the Newton method because it seems to be more stable and can be applied in this context. Stuff for a future cleanup I suppose...


разберись пожалуйста, чем будет являться self внутри метода.


Что должен делать этот метод, и что он делает?


I would like to be able to use snmp data to populate at the same time Host and Instance (probably not useful to set type_instance and plugin_instance at the same time, but I guess it will come up)


Remove all the logging statements.


おかが更新


А откуда взялось name? И ты ведь ничего не делаешь с этим объектом станции


Just another repository


Ugh, another RegExp mistake - the first dot **should** be escaped. I'll do a PR later this day.


Does this mean that `nextQuery` could be defined even if there are no more files or directories to return?


Add assert error msg


Added the technology Skill


`assert ((state == IN_TIMEOUT || state == RETRY_TIME) && thread != null) || thread == null;` ?


mdeejay can you let us do our work pls? You kang all the commits from everywhere and when somoene is trying to make something and do a dirty commit (just to try to fix) you are already saying that it is a kang. If it wasn´t us you still dindn´t have trees. I think you at least should say thank you. You should warn as about it and we will change it. But arriving here and saying "really? wtf?" isn´t nothing.


Fixes #4


Thank You @antirez, We are doing a study on the assignment of CVEs to security fixes.

Is there any reason, why CVE numbers were not part of the original commit message?


Так ты же удалил переменную @stations. Как это должно работать?


`setTimerState(state, null);`


Should not be used at all.


@datakurre How to resolve this error:
` *** TypeError: <MemberData at /plone/portal_memberdata/test_user_1_ used for /plone/acl_users> is not JSON serializable
`


Created multidev environment [aufundab-eu#ci-32](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-32).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-32-aufundab-eu.pantheonsite.io/)


ca ne fonctionne pas si on a plus de mailles dans l_areas (par ex toutes les mailles nationales) que celles utilisées dans unités_geo.


So nhan dang


Buenos días @lvillarreal , te encargás vos de codificar la solución que habíamos comentado?


should we use Cloud-init for this logic? wouldn't it be better to utilize ansible for creating dirs, subscription etc? mostly for getting real execution status/debug which is a weak spot on cloud-init side.


Is there any CVE number associated with this?


Difference in kernel version is indeed to blame; the kernel version I'm using is 4.1.38 in one of my projects.
The file linux/if_pppox.h included by plugin.c has been changed to include linux/in.h and linux/in6.h (https://github.com/torvalds/linux/commit/eafe92114308acf14e45c6c3d154a5dad5523d1a) which trigger the issue


https://github.com/Nur1Labs/LD/commit/97dd0c7dd9bce239b1e519fe8530b711d3fca25e

fixed


a


already checked in PutMULCONST


I found that-
` str(api.user.get_current()) outputs test_user_1_` which is more suitable at ??https://github.com/collective/collective.ifttt/blob/29ef6871910fd26812024df0762aa8eea07afa12/src/collective/ifttt/actions/ifttt.py#L115


mainPath changed


nice！


mainPath error in my computer


`PEP-8` :stuck_out_tongue_closed_eyes:


Gotta check out the automated stuff for this on the next release.


apiReponse和RJM功能重合了，应该统一


do what u want. i dont care.


I won't be online rn.


Why is this commented out now?


Created multidev environment [aufundab-eu#ci-35](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-35).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-35-aufundab-eu.pantheonsite.io/)


Okay :)


`EFFECT_EXTRA_LINK_MATERIAL` do not support `SetCountLimit` at present, see how to implement it in the updated sample: https://github.com/Fluorohydride/ygopro-scripts/commit/8576cb8c4e6632110ad390a8f9bdfd40ece3ddf4#commitcomment-29344780


Ooooh, somehow I thought this was on Saturday. In that case I’ll be there too!


Kangaroo


@hennevogel No, not spreadshirt. It's the link to the box sets. The png image that you merged here goes to the right place, but there is some text that goes below it that says "buy boxed version of openSUSE" that is linked to a broken link. https://shop.opensuse.org/#!/ it's right underneath the png.


Not necessary


Hey TeleRu developer . Please contact me biftor6@gmail.com . I am BifToGram developer.


For the record it looks like this was [fixed in 2.6.3014](https://github.com/craftcms/cms/blob/develop/CHANGELOG-v2.md#263014---2018-04-04).


Hi, it's created in step 8: `cp .env.example .env`


@AndreyAkinshin good idea, yesterday I was tired and I just wanted to fix it asap and get unblocked to finish another job


# Specs execution successful
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[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

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Bamboo specs have been successfully imported and the following deployment projects have been updated.

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stfu noobs


move inside if condition to above condition


update import


+A good place to start is Support Mozilla.

Is this common wording? I would prefer "A good place to start is Mozilla Support."


>(probably not useful to set type_instance and plugin_instance at the same time, but I guess it will come up)
When writing this patch I tried to avoid this and wrote the code with minimal changes.
But while working on this I thinked about different solutions, that's why I know how to implement `HostFromOID` option.

FYI, work is in proggress and I will open WIP PR with some significant intermediate changes soon (~4hours estimate).  That will be much appreciated if you will be in loop of this development, I will describe changes so you can make tests if all them are correct.


Grats @Tobschinski for reaching the 6000th commit! :wink:


perhaps its better not to extend the whole node but only the moves which start from the capture square of (ss+1)->currentMove.

Also something similiar is already used in LMR (search.cpp, line 1015-1017). Perhaps you can do there improvements.


floder --> folder


Created multidev environment [aufundab-eu#ci-38](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-38).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-38-aufundab-eu.pantheonsite.io/)


extract alter part to one more method and common code to one method


Cargo cult, should be removed.
(It's from StartNewSpring which may also want to download map, game, etc., but in this case the only thing we care about is engine)


Removed GROK patterns and added extractors for "elapsed_time", "priv_level", "service", "taskid" and "timezone"


Tpyo? :smile:


надеюсь вас укатают ниже плинтусы где я может быть куплю пару ваших токенов


If you only use the labels_ in the clusters, maybe you don't need to do kmeans. Just do a color palette?


Merge sentences for better understanding


oops sorry -- I first modeled the while (p[0] != 'M' && p[0] != 'T') { p++;}
without the missing ... && p[0] != 0) { ... } so it went out of bounds.
I then fixed it and forgot to remove the comment.


On one hand this is incomplete (see [my merge request](https://tcgit.chem.uzh.ch/alazzaro/dbcsr/merge_requests/1/diffs?commit_id=947d0c309ad8ae3c4fde894b6e6def669e9ab76f) for DBCSR), on the other hand it ignores files which seem to be specific to your build environment (`arch/local.mdbg`), which at least requires a documentation why they are there.


I think there should be a remark somewhere that nested objects are not automatically deleted unless you add delete behavior.


Created multidev environment [bsi1806#ci-4](https://dashboard.pantheon.io/sites/eaa3adc3-7cfb-4a08-8c16-d4f8ba03a783#ci-4).

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No crec q calgui


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`grayBackground`


6月14日组会ppt，介绍上周工作。


Use human names instead of code (gray, lightgray, ...). plz


90% of PHP projects will start reporting E_DEPRECATED from now :heart_eyes:


Puzzle `843-976686f8` disappeared from [`src/main/groovy/com/zerocracy/stk/package-info.java`](https://github.com/zerocracy/farm/blob/master/src/main/groovy/com/zerocracy/stk/package-info.java), that's why I closed #1105. Please, remember that the puzzle was not necessarily removed in this particular commit. Maybe it happened earlier, but we discovered this fact only now.


Maybe be a bit clearer on what `current` actually means here.


Puzzle `1105-a65697ae` discovered in   [`src/main/groovy/com/zerocracy/stk/package-info.java`](  https://github.com/zerocracy/farm/blob/master/src/main/groovy/com/zerocracy/stk/package-info.java)   and submitted as #1152. Please, remember that the puzzle was not   necessarily added in this particular commit. Maybe it was added earlier, but   we discovered it only now.


改个字


@hleb-albau told me that we are going to work with open-jdk. True or not?


thanks, perfect timing, I was about to push some fixes anyway and included this one as well now :)


If you removed ROADMAP.md, you also need to delete the mention of it in README.md


the `-I` (capital i) seems to be a GNU extension, at least [POSIX ls](http://pubs.opengroup.org/onlinepubs/009695399/utilities/ls.html) does not seem to cover it.
It was there before, but still, we might have to think about since this might break on BSD systems.


Created multidev environment [aufundab-eu#ci-39](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-39).

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merging master with NewBranch2


Created multidev environment [bsi1806#ci-5](https://dashboard.pantheon.io/sites/eaa3adc3-7cfb-4a08-8c16-d4f8ba03a783#ci-5).

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I get why `dirs` are order-only deps, but shouldn't `exts` be real dependencies and trigger a rebuild?


tem file


Nevermind, I got it, later on there is the `$(ALL_OBJECTS): $(EXTSHOME)/VERSIONS` which adds the dependency explicitly. Might be a good idea to add a comment there though


Indeed. Let me fix this. Good catch, thanks.


@jco-odoo this kind of commit is not supposed to land on a stable branch, it is not a fix.
Also, please specify the reference to the PR/issue


It was a favour he did to us as a lot of contributors need it. Please...


True and we're working with it now


`git diff upstream/master alazzaro/master` shows me a trailing space here


In a view mode they are merged


Created multidev environment [aufundab-eu#ci-42](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-42).

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d879a30で対応されました。


YOLO


Yeah, I know. And in the intervening ten years I haven't seen a single package that actually benefited from the special INT_MAX treatment, everybody treats Patch: as if it was Patch0:, so having rpm doing something else seems dumb. Especially since we can do something more useful with the unnumbered version...


Good Addition!


@shekhawat2 somoene is mad xD


I just gave it a try, but it looks like @dizzy2003 will have to make some adjustments on our end.  The water physics solution we're using is throwing compile errors due to sampleHeight no longer being there (or something like that).

On the plus side though, the surface shader now seems to work as-is with the fog solution we're using.  Too bad @dizzy2003 spent a few days modifying the fog when all he needed to do was to change Crest's render queue. :P


I WILL ADD THAT


Created multidev environment [aufundab-eu#ci-44](https://dashboard.pantheon.io/sites/1ec59943-db4e-417e-962f-9455eafeb68c#ci-44).

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@rustyrussel was the point of this to exit the script? It seems redundant to me. Is it OK if it is removed?


2048

kopie známé logické hry 2048

pole čísel 4x4

sčítání mocnin dvou


move below if condiftion to above if


remove this change


Чтоб вы суки с треском провалились!!!!!!!!!!


All of this table parsing should be in libldap (e.g. init.c), so we don't have to maintain the list of options in two different places.


pls help resolve error
\\\

C:\Users\SccS\Desktop\test>balong_flash.exe 3.bin

 ????????? ??? ???????? ????????? ?? Balong-???????, V3.0.277, (c) forth32, 2015, GNU GPLv3
 ???? ??? Windows 32bit  (c) rust3028, 2016
--------------------------------------------------------------------------------------------------

 ??? ????? ????????: f (FW_ISO_WEBUI)

 ???????? ???????: 3750 ????
 ??? ????????? ?????: 778A8D175E602B7B779D9E05C330B5279B0661BF2EED99A20445B366D63DD697
 ?????? ????????: 21.328.62.00.397
 ?????????:       BV7R11EC1
 ???? ??????:     2017.10.22 07:20:08
 ?????????: ?????? 1, ??? ????????????: HWEW11.1

????? ???????????? ?????...
????: "FC - PC UI Interface (COM13)"

 ????? ???????? ???????: FW_ISO_WEBUI (3750 ????)
 ?????? ?????????: 7200B--SKCBADZM
 ????????????? ??????????: HUAWEI BV7R11EC1
----------------------------------------------------

##  ---- ??? ??????? ---- ????????
00  Fastboot              100%
01  M3Boot_R11            100%
02  M3Boot-ptable         100%
03  Kernel_R11            100%
04  VxWorks_R11           100%
05  M3Image_R11           100%
06  DSP_R11               100%
07  Nvdload_R11           100%
08  System                100%
! ?????? ???????? ??????? 8 (System) - ??? ?????? 0c


Nice joke


add detail level comment for this method


Probably should have this help text in the libldap table too.


add comment


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NullReferenceException: Object reference not set to an instance of an object
ToastMessageScript.showToastOnUiThread (System.String toastString)


ok . thank you


I'm trying to re-implement the Relay Chess variant move generator:
ddugovic/Stockfish@ac56608#diff-85fbbdc0ae2caf8c12bb6a676da65c9aR379


Guys, give us a chance to resubmit. My documents are perfectly fine and your KYC provider rejected them. You said you will send mails when problem so we can resubmit. Please help me. I win in a ICO lottery for the first time and I was so happy and now its ruined. You explicitly stated that you will contact us to resubmit. its just not fair.


While using develop (because of CAN-FD with Vector) the filters do not work any more. I don't completely understand the changes above - anyway where are the filters actually applied now?


Local dictionary exclude is not handled please handle the same


qwe


"Local Dictionary Columns" change this to Local Dictionary Include


The fix is to take only positive dimensions.


This change breaks my code. A handler should **NOT** be forced to return a string.

Alternative solution:
```ts
export type OnInputChangeHandler = (inputValue: string) => string | void;
```


Fixed typo


Check if same type of method is already present or else move to util


큐


Isn't `./src/locales` also needed?


Created multidev environment [bsi1806#ci-7](https://dashboard.pantheon.io/sites/eaa3adc3-7cfb-4a08-8c16-d4f8ba03a783#ci-7).

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Still need to use boom for sending error messages back to the API request


@fidelram @vivekbhr You might use these two lines in HiCExplorer wherever you're using `pool.map_async()` there. It turns out that deepTools has only ever killed off its forks when it's completely finished. This means that it's been holding on to a potentially large amount of memory for long periods of time, which likely relates to its high memory demands. The `.close()` and `.join()` help free up memory then. I don't know if HiCExplorer has similar issues, but if so it's an easy fix.


How to delete dis


mistake , not fixed for browser still


Shouldn't htis be tackled by https://github.com/vyos/vyos-build/commit/91351362c91775f6e5a351cfa3b619e7f3dcce5e ? Or did I get something wrong?