[inst/examples/example_experiment.R:91:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_experiment.R#L91) *style:* **Commented code should be removed.**
```r
  # library(raster)
    ^~~~~~~~~~~~~~~
```
[inst/examples/example_experiment.R:92:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_experiment.R#L92) *style:* **Commented code should be removed.**
```r
  # beginCluster(20) # if you have multiple clusters available, use them here to save time
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_experiment.R:96:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_experiment.R#L96) *style:* **Commented code should be removed.**
```r
  # endCluster() # end the clusters
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_experiment.R:152:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_experiment.R#L152) *style:* **Commented code should be removed.**
```r
  # fires <- lapply(sims, function(x) x$landscape$fires) %>% stack
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_POM.R:48:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L48) *style:* **Commented code should be removed.**
```r
  # cl <- makeCluster(detectCores() - 1) # not implemented yet in DEoptim
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_POM.R:83:4:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L83) *style:* **Commented code should be removed.**
```r
  #stopCluster(cl) # not yet implemented, waiting for DEoptim
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/examples/example_POM.R:106:34:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L106) *style:* **Variable or function name should be lowerCamelCase.**
```r
    params(sim1)$caribouMovement$N <- pars[2]
                                 ^
```
[inst/examples/example_POM.R:113:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L113) *style:* **Variable or function name should be lowerCamelCase.**
```r
    nPattern_Out <- caribouFn(out$caribou)
    ^~~~~~~~~~~~
```
[inst/examples/example_POM.R:119:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L119) *style:* **Commented code should be removed.**
```r
    # cat(minimizeFn)
      ^~~~~~~~~~~~~~~
```
[inst/examples/example_POM.R:120:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L120) *style:* **Commented code should be removed.**
```r
    # cat(" ")
      ^~~~~~~~
```
[inst/examples/example_POM.R:121:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L121) *style:* **Commented code should be removed.**
```r
    # cat(pars)
      ^~~~~~~~~
```
[inst/examples/example_POM.R:122:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/examples/example_POM.R#L122) *style:* **Commented code should be removed.**
```r
    # cat("\n")
      ^~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:1:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L1) *style:* **Variable or function name should be lowerCamelCase.**
```r
SpaDES.core.version <- "0.1.0"
^~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:54:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L54) *style:* **Variable or function name should be lowerCamelCase.**
```r
doEvent.caribouMovement <- function(sim, eventTime, eventType, debug = FALSE) {
^~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:86:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L86) *style:* **Lines should not be more than 100 characters.**
```r
      sim <- scheduleEvent(sim, time(sim) + P(sim)$.plotInterval, "caribouMovement", "plot", .last())
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:95:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L95) *style:* **Lines should not be more than 100 characters.**
```r
      sim <- scheduleEvent(sim, time(sim) + P(sim)$.plotInterval, "caribouMovement", "plot", .last())
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:102:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L102) *style:* **Lines should not be more than 100 characters.**
```r
      sim <- scheduleEvent(sim, time(sim) + P(sim)$.saveInterval, "caribouMovement", "save", .last() + 1)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:114:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L114) *style:* **Variable or function name should be lowerCamelCase.**
```r
Init <- function(sim) {
^~~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:121:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L121) *style:* **Variable or function name should be lowerCamelCase.**
```r
  N <- P(sim)$N
  ^
```
[inst/sampleModules/caribouMovement/caribouMovement.R:122:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L122) *style:* **Variable or function name should be lowerCamelCase.**
```r
  IDs <- as.character(1:N)
  ^~~
```
[inst/sampleModules/caribouMovement/caribouMovement.R:138:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/caribouMovement/caribouMovement.R#L138) *style:* **Variable or function name should be lowerCamelCase.**
```r
Move <- function(sim) {
^~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:1:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L1) *style:* **Variable or function name should be lowerCamelCase.**
```r
SpaDES.core.version <- "0.1.0"
^~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:20:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L20) *style:* **Lines should not be more than 100 characters.**
```r
    person(c("Alex", "M"), "Chubaty", email = "alexander.chubaty@canada.ca", role = c("aut", "cre")),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:21:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L21) *style:* **Lines should not be more than 100 characters.**
```r
    person(c("Eliot", "J", "B"), "McIntire", email = "eliot.mcintire@canada.ca", role = c("aut", "cre")),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:35:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L35) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("persistprob", "numeric", 0.00, 0, 1, "probability of fire persisting in a pixel"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:37:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L37) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("spreadprob", "numeric", 0.225, 0.05, 0.5, "probability of fire spreading into a pixel"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:38:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L38) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("startTime", "numeric", start(sim) + 1, 0, end(sim), "time of initial fire ignition"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:39:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L39) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".plotInitialTime", "numeric", start(sim), start(sim), end(sim) + 1, "time to schedule first plot event"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:41:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L41) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".saveInitialTime", "numeric", NA_real_, NA, NA, "time to schedule first save event"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:42:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L42) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".saveInterval", "numeric", NA_real_, NA, NA, "time interval between save events")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:59:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L59) *style:* **Variable or function name should be lowerCamelCase.**
```r
doEvent.fireSpread <- function(sim, eventTime, eventType, debug = FALSE) {
^~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:87:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L87) *style:* **Lines should not be more than 100 characters.**
```r
      sim <- scheduleEvent(sim, time(sim), "fireSpread", "stats") # do stats immediately following burn
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:142:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L142) *style:* **Variable or function name should be lowerCamelCase.**
```r
Init <- function(sim) {
^~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:146:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L146) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Fires <- raster(extent(landscapes), ncol = ncol(landscapes),
  ^~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:150:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L150) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Fires <- setValues(Fires, 0)
  ^~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:153:14:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L153) *style:* **Variable or function name should be lowerCamelCase.**
```r
  landscapes$Fires <- Fires
             ^~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:159:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L159) *style:* **Variable or function name should be lowerCamelCase.**
```r
Burn <- function(sim) {
^~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:162:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L162) *style:* **Variable or function name should be lowerCamelCase.**
```r
  Fires <- spread(landscapes[[1]],
  ^~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:174:14:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L174) *style:* **Variable or function name should be lowerCamelCase.**
```r
  landscapes$Fires <- Fires
             ^~~~~
```
[inst/sampleModules/fireSpread/fireSpread.R:181:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/fireSpread/fireSpread.R#L181) *style:* **Variable or function name should be lowerCamelCase.**
```r
Stats <- function(sim) {
^~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:1:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L1) *style:* **Variable or function name should be lowerCamelCase.**
```r
SpaDES.core.version <- "0.1.0"
^~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:33:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L33) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("inRAM", "logical", FALSE, TRUE, FALSE, "should the raster be stored in memory?"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:34:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L34) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("nx", "numeric", 100L, 10L, 500L, "size of map (number of pixels) in the x dimension"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:35:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L35) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter("ny", "numeric", 100L, 10L, 500L, "size of map (number of pixels) in the y dimension"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:37:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L37) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".plotInitialTime", "numeric", start(sim), start(sim), NA, "time to schedule first plot event"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:38:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L38) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".plotInterval", "numeric", NA_real_, NA, NA, "time interval between plot events"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:39:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L39) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".saveInitialTime", "numeric", NA_real_, NA, NA, "time to schedule first save event"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:40:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L40) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".saveInterval", "numeric", NA_real_, NA, NA, "time interval between save events"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:41:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L41) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".useCache", "logical", FALSE, c("init", "plot"), NA, "should the module result be cached for future use")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:55:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L55) *style:* **Variable or function name should be lowerCamelCase.**
```r
doEvent.randomLandscapes <- function(sim, eventTime, eventType, debug = FALSE) {
^~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:75:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L75) *style:* **Lines should not be more than 100 characters.**
```r
      sim <- scheduleEvent(sim, time(sim) + P(sim)$.saveInterval, "randomLandscapes", "save", .last() + 1)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:86:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L86) *style:* **Variable or function name should be lowerCamelCase.**
```r
Init <- function(sim) {
^~~~
```
[inst/sampleModules/randomLandscapes/randomLandscapes.R:100:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/randomLandscapes/randomLandscapes.R#L100) *style:* **Variable or function name should be lowerCamelCase.**
```r
    DEM <- gaussMap(template, scale = 300, var = 0.03, speedup = speedup, inMemory = inMemory)
    ^~~
```
[inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.R:17:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.R#L17) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".plotInitialTime", "numeric", NA_real_, NA, NA, "This describes the simulation time at which the first plot event should occur"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.R:18:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.R#L18) *style:* **Lines should not be more than 100 characters.**
```r
    defineParameter(".saveInitialTime", "numeric", NA_real_, NA, NA, "This describes the simulation time at which the first save event should occur")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:128:22:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L128) *style:* **Variable or function name should be lowerCamelCase.**
```r
    obj$.list$.envir$._startClockTime <- NULL
                     ^~~~~~~~~~~~~~~~
```
[R/cache.R:129:22:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L129) *style:* **Variable or function name should be lowerCamelCase.**
```r
    obj$.list$.envir$._timestamp <- NULL
                     ^~~~~~~~~~~
```
[R/cache.R:235:50:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L235) *style:* **Commas should always have a space after.**
```r
          cat(crayon::blue("  Using ", fromWhere," copy of", cur$moduleName, "module\n"))
                                                 ^
```
[R/cache.R:246:50:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L246) *style:* **Commas should always have a space after.**
```r
          cat(crayon::blue("  Using ", fromWhere," copy of", cur$eventType, "event in",
                                                 ^
```
[R/cache.R:296:10:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L296) *style:* **Commented code should be removed.**
```r
        #checkPath(cacheRepo, create = TRUE) #SpaDES dependency
         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:420:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L420) *style:* **Lines should not be more than 100 characters.**
```r
        #   makes soft copy of all objects, i.e., they have the identical objects, which are pointers only
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:448:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L448) *style:* **Lines should not be more than 100 characters.**
```r
        list2env(mget(lsObjectEnv[lsObjectEnv %in% createOutputs | lsObjectEnv %in% expectsInputs], envir = object@.envir), envir = object2@.envir)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:449:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L449) *style:* **Put spaces around all infix operators.**
```r
        if (length(object2@current)==0) { # means it is not in a spades call
                                  ~^~~
```
[R/cache.R:449:41:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L449) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
        if (length(object2@current)==0) { # means it is not in a spades call
                                        ^
```
[R/cache.R:451:15:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L451) *style:* **Commented code should be removed.**
```r
          #   length(unlist(object2@completed, recursive = FALSE))/(length(object2@completed[[1]]))
              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:465:12:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L465) *style:* **Commented code should be removed.**
```r
          #object2@events <- unique(rbindlist(list(object@events, object2@events)))
           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:469:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L469) *style:* **Lines should not be more than 100 characters.**
```r
        # This is for objects that are not in the return environment yet because they are unrelated to the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:482:10:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L482) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      for(atts in attrsToGrab) {
         ^
```
[R/cache.R:486:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L486) *style:* **Commented code should be removed.**
```r
      # attr(object2, "tags") <- attr(object, "tags")
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:487:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L487) *style:* **Commented code should be removed.**
```r
      # attr(object2, "call") <- attr(object, "call")
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:488:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L488) *style:* **Commented code should be removed.**
```r
      # attr(object2, "function") <- attr(object, "function")
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:521:66:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L521) *style:* **Variable or function name should be lowerCamelCase.**
```r
  setGeneric(".addTagsToOutput", function(object, outputObjects, FUN) {
                                                                 ^~~
```
[R/cache.R:544:48:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L544) *style:* **Variable or function name should be lowerCamelCase.**
```r
  definition = function(object, outputObjects, FUN, preDigestByClass) {
                                               ^~~
```
[R/cache.R:636:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L636) *style:* **Variable or function name should be lowerCamelCase.**
```r
objSize.simList <- function(x, quick = getOption("reproducible.quick", FALSE)) {
^~~~~~~~~~~~~~~
```
[R/cache.R:663:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L663) *style:* **Variable or function name should be lowerCamelCase.**
```r
makeMemoiseable.simList <- function(x) {
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/cache.R:671:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/cache.R#L671) *style:* **Variable or function name should be lowerCamelCase.**
```r
unmakeMemoiseable.simList_ <- function(x) {
^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/checkpoint.R:36:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/checkpoint.R#L36) *style:* **Variable or function name should be lowerCamelCase.**
```r
doEvent.checkpoint <- function(sim, eventTime, eventType, debug = FALSE) {
^~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:86:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L86) *style:* **Lines should not be more than 100 characters.**
```r
                xAsCall <- .isLastLineSim(x = x, xAsString = bb[seq(funStarts[yy], funEnds[yy + 1])])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:90:16:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L90) *style:* **Commented code should be removed.**
```r
              #y = strsplit(bb[funStarts[yy]], split = "\\s+")[[1]][1]
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:91:53:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L91) *style:* **Commas should always have a space after.**
```r
              y <- paste0(cantCodeCheckMessage, "'",bb[funStarts[yy]], "'")
                                                    ^
```
[R/code-checking.R:144:39:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L144) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if (identical(type, "returnSim")) { # This is intended for only the last line of a function
                                      ^
```
[R/code-checking.R:182:48:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L182) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
      } else if (identical(x[[1]], quote(`<-`)) ) {
                                               ^
```
[R/code-checking.R:185:62:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L185) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
            if (any(grepl(x[[2]][[2]], pattern = ".envir"))) {# i.e., sim@.envir
                                                             ^
```
[R/code-checking.R:202:19:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L202) *style:* **Place a space before left parenthesis, except in a function call.**
```r
          x <- x[-(1:2)]
                  ^
```
[R/code-checking.R:218:29:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L218) *style:* **Place a space before left parenthesis, except in a function call.**
```r
          x[[2]] <- x[[2]][-(1:2)]
                            ^
```
[R/code-checking.R:320:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L320) *style:* **Lines should not be more than 100 characters.**
```r
    allChecks[anyCantCodeCheck] <- lapply(names(cantCodeCheck[anyCantCodeCheck]), function(objName) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:369:51:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L369) *style:* **Commas should always have a space after.**
```r
                                              " ",verb," declared in outputObjects, ",
                                                  ^
```
[R/code-checking.R:369:56:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L369) *style:* **Commas should always have a space after.**
```r
                                              " ",verb," declared in outputObjects, ",
                                                       ^
```
[R/code-checking.R:385:20:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L385) *style:* **Commas should always have a space after.**
```r
               " ",verb," declared in inputObjects, ",
                   ^
```
[R/code-checking.R:385:25:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L385) *style:* **Commas should always have a space after.**
```r
               " ",verb," declared in inputObjects, ",
                        ^
```
[R/code-checking.R:396:90:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L396) *style:* **Commas should always have a space after.**
```r
                                       paste0(paste(missingFrmMod, collapse = ", "), " ",verb,
                                                                                ^
```
[R/code-checking.R:441:75:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L441) *style:* **Commas should always have a space after.**
```r
             " but only for the 'get' functions, not the 'set' function ","
                                                                          ^
```
[R/code-checking.R:455:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L455) *style:* **Lines should not be more than 100 characters.**
```r
    missingInMetadata <- simAssignsNotInDotInputObjects[!(simAssignsNotInDotInputObjects %in% outputObjNames)]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:464:24:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L464) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," assigned to sim inside ",
                       ^
```
[R/code-checking.R:464:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L464) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," assigned to sim inside ",
                                   ^
```
[R/code-checking.R:465:33:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L465) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in outputObjects")
                                ^
```
[R/code-checking.R:465:45:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L465) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in outputObjects")
                                            ^
```
[R/code-checking.R:472:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L472) *style:* **Lines should not be more than 100 characters.**
```r
    missingInMetadata <- simAssignsInDotInputObjects[!(simAssignsInDotInputObjects %in% inputObjNames)]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:481:24:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L481) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," assigned to sim inside ",
                       ^
```
[R/code-checking.R:481:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L481) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," assigned to sim inside ",
                                   ^
```
[R/code-checking.R:482:33:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L482) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in inputObjects")
                                ^
```
[R/code-checking.R:482:45:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L482) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in inputObjects")
                                            ^
```
[R/code-checking.R:504:24:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L504) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," used from sim inside ",
                       ^
```
[R/code-checking.R:504:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L504) *style:* **Commas should always have a space after.**
```r
                   " ",verbs[[fn]]," used from sim inside ",
                                   ^
```
[R/code-checking.R:505:33:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L505) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in inputObjects")
                                ^
```
[R/code-checking.R:505:45:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L505) *style:* **Commas should always have a space after.**
```r
                   fn, ", but ",verbs[[fn]]," not declared in inputObjects")
                                            ^
```
[R/code-checking.R:517:13:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L517) *style:* **Commas should always have a space after.**
```r
        " ",verb," used from sim inside ",
            ^
```
[R/code-checking.R:517:18:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L517) *style:* **Commas should always have a space after.**
```r
        " ",verb," used from sim inside ",
                 ^
```
[R/code-checking.R:519:18:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L519) *style:* **Commas should always have a space after.**
```r
        ", but ",verb," not declared in inputObjects"
                 ^
```
[R/code-checking.R:519:23:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L519) *style:* **Commas should always have a space after.**
```r
        ", but ",verb," not declared in inputObjects"
                      ^
```
[R/code-checking.R:662:6:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L662) *style:* **Commented code should be removed.**
```r
    #unique(pd[outerWh, "line1"])
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/code-checking.R:666:34:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L666) *style:* **Commas should always have a space after.**
```r
      whInner <- any((pd[outerWh,"line1"] < lwf) & (pd[outerWh,"line2"] > lwf) )
                                 ^
```
[R/code-checking.R:666:64:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L666) *style:* **Commas should always have a space after.**
```r
      whInner <- any((pd[outerWh,"line1"] < lwf) & (pd[outerWh,"line2"] > lwf) )
                                                               ^
```
[R/code-checking.R:666:79:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/code-checking.R#L666) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
      whInner <- any((pd[outerWh,"line1"] < lwf) & (pd[outerWh,"line2"] > lwf) )
                                                                              ^
```
[R/copy.R:37:13:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/copy.R#L37) *style:* **Variable or function name should be lowerCamelCase.**
```r
            sim_ <- object
            ^~~~
```
[R/downloadData.R:54:96:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L54) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    io <- .parseModulePartial(sim, modules = list(module), defineModuleElement = "inputObjects" )
                                                                                ^
```
[R/downloadData.R:242:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L242) *style:* **Commented code should be removed.**
```r
    # parsedModule <- parse(file = file.path(path, module, paste0(module, '.R')))
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/downloadData.R:243:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L243) *style:* **Commented code should be removed.**
```r
    # urls <- .getSourceURL(pattern = fileToDownload, x = parsedModule)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/downloadData.R:250:8:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L250) *style:* **Commented code should be removed.**
```r
      #urls <- moduleMetadata(module, path)$inputObjects$sourceURL
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/downloadData.R:275:27:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L275) *style:* **Commas should always have a space after.**
```r
    chksums2 <- chksums[0,]
                          ^
```
[R/downloadData.R:276:6:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L276) *style:* **Commented code should be removed.**
```r
    #children <- moduleMetadata(module, path)$childModules
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/downloadData.R:279:13:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L279) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( all( nzchar(children) & !is.na(children) ) ) {
            ^
```
[R/downloadData.R:279:18:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L279) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( all( nzchar(children) & !is.na(children) ) ) {
                 ^
```
[R/downloadData.R:279:54:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L279) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( all( nzchar(children) & !is.na(children) ) ) {
                                                     ^
```
[R/downloadData.R:279:56:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/downloadData.R#L279) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( all( nzchar(children) & !is.na(children) ) ) {
                                                       ^
```
[R/experiment.R:200:6:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L200) *style:* **Commented code should be removed.**
```r
    #sim <- Copy(sim, objects = FALSE, queues = TRUE)
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/experiment.R:215:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L215) *style:* **Commented code should be removed.**
```r
    # cl <- tryCatch(getCluster(), error = function(x) NULL)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/experiment.R:216:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L216) *style:* **Commented code should be removed.**
```r
    # on.exit(if (!is.null(cl)) returnCluster(), add = TRUE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/experiment.R:218:6:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L218) *style:* **Commented code should be removed.**
```r
    #if (length(modules) == 0) modules <- list(modules(sim)[-(1:4)])
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/experiment.R:222:11:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L222) *style:* **Commented code should be removed.**
```r
        # unlist(params[paramsTmp], recursive = FALSE)
          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/experiment.R:314:58:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/experiment.R#L314) *style:* **Commented code should be removed.**
```r
            params(sim_)[[mod[x]]][[param[[x]]]] <- val #factorialExp[ind,x]
                                                         ^~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:232:74:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L232) *style:* **Place a space before left parenthesis, except in a function call.**
```r
                             paste0("package:", .pkgEnv$corePackagesVec[-(1:2)]))
                                                                         ^
```
[R/helpers.R:264:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L264) *style:* **Variable or function name should be lowerCamelCase.**
```r
all.equal.simList <- function(target, current, ...) {
^~~~~~~~~~~~~~~~~
```
[R/helpers.R:280:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L280) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm("._startClockTime", envir = envir(target)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:281:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L281) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm("._startClockTime", envir = envir(current)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:282:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L282) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm("._firstEventClockTime", envir = envir(target)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:283:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L283) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm("._firstEventClockTime", envir = envir(current)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:284:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L284) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm(".timestamp", envir = envir(target)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/helpers.R:285:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/helpers.R#L285) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(rm(".timestamp", envir = envir(current)))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/load.R:198:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/load.R#L198) *style:* **Lines should not be more than 100 characters.**
```r
                names(argument) <- c(nam, names(formals(getFromNamespace(loadFun[y], loadPackage[y])))[1])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/misc-methods.R:465:55:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/misc-methods.R#L465) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
          (inherits(get(w, envir = envir), "integer")) ) {
                                                      ^
```
[R/module-define.R:744:63:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-define.R#L744) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
      exts <- na.omit(match(file_ext(fl), .fileExts[, "exts"]) )
                                                              ^
```
[R/module-dependencies-class.R:53:13:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-class.R#L53) *style:* **Variable or function name should be lowerCamelCase.**
```r
            out.df <- data.frame(
            ^~~~~~
```
[R/module-dependencies-class.R:171:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-class.R#L171) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    if ( !all(colnames(._outputObjectsDF()) %in% colnames(object@outputObjects)) ) {
        ^
```
[R/module-dependencies-class.R:171:81:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-class.R#L171) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    if ( !all(colnames(._outputObjectsDF()) %in% colnames(object@outputObjects)) ) {
                                                                                ^
```
[R/module-dependencies-methods.R:43:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L43) *style:* **Variable or function name should be lowerCamelCase.**
```r
    DT <- .depsEdgeListMem(deps, plot)
    ^~
```
[R/module-dependencies-methods.R:56:3:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L56) *style:* **Variable or function name should be lowerCamelCase.**
```r
  sim.in <- sim.out <- data.table(objectName = character(0),
  ^~~~~~
```
[R/module-dependencies-methods.R:56:13:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L56) *style:* **Variable or function name should be lowerCamelCase.**
```r
  sim.in <- sim.out <- data.table(objectName = character(0),
            ^~~~~~~
```
[R/module-dependencies-methods.R:61:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L61) *style:* **Variable or function name should be lowerCamelCase.**
```r
      z.in <- as.data.table(x@inputObjects)[, .(objectName, objectClass)]
      ^~~~
```
[R/module-dependencies-methods.R:62:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L62) *style:* **Variable or function name should be lowerCamelCase.**
```r
      z.out <- as.data.table(x@outputObjects)[, .(objectName, objectClass)]
      ^~~~~
```
[R/module-dependencies-methods.R:65:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L65) *style:* **Variable or function name should be lowerCamelCase.**
```r
        sim.in <<- rbindlist(list(sim.in, z.in), use.names = TRUE)
        ^~~~~~
```
[R/module-dependencies-methods.R:68:9:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L68) *style:* **Variable or function name should be lowerCamelCase.**
```r
        sim.out <<- rbindlist(list(sim.out, z.out), use.names = TRUE)
        ^~~~~~~
```
[R/module-dependencies-methods.R:80:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L80) *style:* **Variable or function name should be lowerCamelCase.**
```r
    DT <- dx[, list(from = module, to = i.module,
    ^~
```
[R/module-dependencies-methods.R:83:15:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L83) *style:* **Variable or function name should be lowerCamelCase.**
```r
    if (plot) DT <- DT[!duplicated(DT[, 1:2, with = FALSE]), ]
              ^~
```
[R/module-dependencies-methods.R:85:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L85) *style:* **Variable or function name should be lowerCamelCase.**
```r
    DT <- data.table(from = character(0), to = character(0),
    ^~
```
[R/module-dependencies-methods.R:163:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L163) *style:* **Variable or function name should be lowerCamelCase.**
```r
    M <- distances(simGraph, mode = "out")
    ^
```
[R/module-dependencies-methods.R:195:39:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L195) *style:* **`%>%` should always have a space before it and a new line after it, unless the full pipeline fits on one line.**
```r
      missingObjects <- simEdgeList %>% filter(from != to) %>%
                                    ~~^
```
[R/module-dependencies-methods.R:209:26:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L209) *style:* **`%>%` should always have a space before it and a new line after it, unless the full pipeline fits on one line.**
```r
    return(newEdgeList %>% data.table() %>% setorder("from", "to", "objName"))
                       ~~^
```
[R/module-dependencies-methods.R:245:79:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-dependencies-methods.R#L245) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
              loadOrder <- names(simGraph[[tsort, ]]) %>% .[!(. %in% "_INPUT_" )]
                                                                              ^
```
[R/module-repository.R:28:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L28) *style:* **Lines should not be more than 100 characters.**
```r
#'          (\url{http://spades-core.predictiveecology.org/articles/ii-modules.html#module-directory-structure-modulename}),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/module-repository.R:52:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L52) *style:* **Lines should not be more than 100 characters.**
```r
    zipFiles <- grep(file.path(name, "data"), zipFiles, invert = TRUE, value = TRUE) # remove any zip in data folder
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/module-repository.R:293:8:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L293) *style:* **Commented code should be removed.**
```r
      #versionWarning(name, version)
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/module-repository.R:305:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L305) *style:* **Lines should not be more than 100 characters.**
```r
        GET(zip, ua, config = list(config(token = pat)), write_disk(localzip, overwrite = overwrite))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/module-repository.R:401:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L401) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/module-repository.R:402:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/module-repository.R#L402) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/moduleMetadata.R:75:6:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/moduleMetadata.R#L75) *style:* **Commented code should be removed.**
```r
    #metadata <- eval(parse(text = x)) # can't be used because can't evaluate start(sim)
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting-diagrams.R:78:5:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L78) *style:* **Variable or function name should be lowerCamelCase.**
```r
    DT <- tail(completed(sim), n)
    ^~
```
[R/plotting-diagrams.R:173:28:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L173) *style:* **`%>%` should always have a space before it and a new line after it, unless the full pipeline fits on one line.**
```r
        sapply(ll, NROW) %>% sum() %>% `*`(., 26L)
                         ~~^
```
[R/plotting-diagrams.R:325:7:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L325) *style:* **Variable or function name should be lowerCamelCase.**
```r
      PlotRemovingDots <- function(modDia, plotFn, axes, ...,
      ^~~~~~~~~~~~~~~~
```
[R/plotting-diagrams.R:326:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L326) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.color,
                                   ^~~~~~~~~~~~
```
[R/plotting-diagrams.R:327:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L327) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.size,
                                   ^~~~~~~~~~~
```
[R/plotting-diagrams.R:328:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L328) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.size2,
                                   ^~~~~~~~~~~~
```
[R/plotting-diagrams.R:329:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L329) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.shape,
                                   ^~~~~~~~~~~~
```
[R/plotting-diagrams.R:330:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L330) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.label.cex,
                                   ^~~~~~~~~~~~~~~~
```
[R/plotting-diagrams.R:331:36:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L331) *style:* **Variable or function name should be lowerCamelCase.**
```r
                                   vertex.label.family,
                                   ^~~~~~~~~~~~~~~~~~~
```
[R/plotting-diagrams.R:345:1:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L345) *style:* **Lines should not be more than 100 characters.**
```r
          c(nchar(namesModDia)^0.8 * 10) # use exponential to stretch out, and multiplication to make all bigger
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotting-diagrams.R:443:22:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting-diagrams.R#L443) *style:* **Only use double-quotes.**
```r
    if ((Sys.info()[['sysname']] == "Darwin") && (Sys.which("glpsol") == "")) {
                     ^~~~~~~~~
```
[R/plotting.R:6:31:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L6) *style:* **Variable or function name should be lowerCamelCase.**
```r
                              na.color, zero.color, length){
                              ^~~~~~~~
```
[R/plotting.R:6:41:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L6) *style:* **Variable or function name should be lowerCamelCase.**
```r
                              na.color, zero.color, length){
                                        ^~~~~~~~~~
```
[R/plotting.R:37:25:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L37) *style:* **Variable or function name should be lowerCamelCase.**
```r
                        na.color, zero.color, length) {
                        ^~~~~~~~
```
[R/plotting.R:37:35:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L37) *style:* **Variable or function name should be lowerCamelCase.**
```r
                        na.color, zero.color, length) {
                                  ^~~~~~~~~~
```
[R/plotting.R:86:22:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L86) *style:* **Put spaces around all infix operators.**
```r
      eval(parse(text=deparse(elems[[useElem]])), envir=tmp@.envir),
                    ~^~
```
[R/plotting.R:86:56:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L86) *style:* **Put spaces around all infix operators.**
```r
      eval(parse(text=deparse(elems[[useElem]])), envir=tmp@.envir),
                                                      ~^~
```
[R/plotting.R:87:12:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L87) *style:* **Put spaces around all infix operators.**
```r
      error=function(x) eval(parse(text=deparse(elems[[useElem]])), envir=envir))
          ~^~
```
[R/plotting.R:87:40:](https://github.com/PredictiveEcology/SpaDES.core/blob/a83a17eb34b451fbd3d6b425709b78642368da3e/R/plotting.R#L87) *style:* **Put spaces around all infix operators.**
```r
      error=function(x) eval(parse(text=deparse(elems[[useElem]])), envir=envir))
                                      ~^~
```


Коммиты надо привязывать к issue


Thank you!


:smile:


@josephwright Prepared for a new release or not?


Begining


[R/rkt_calc_harm_mean.R:5:11:](https://github.com/richelbilderbeek/raket/blob/6b251d636801cf47d9be177034d5156f636d0223/R/rkt_calc_harm_mean.R#L5) *style:* **Trailing whitespace is superfluous.**
```r
#' @export
          ^
```
[tests/testthat/test-rkt_calc_harm_mean.R:6:1:](https://github.com/richelbilderbeek/raket/blob/6b251d636801cf47d9be177034d5156f636d0223/tests/testthat/test-rkt_calc_harm_mean.R#L6) *style:* **Trailing whitespace is superfluous.**
```r

^~
```


These are just check to eliminate another level of lazy evaluation which might happen that `shape` was known before actually finishing aggregate functions, just after recognizing groups inside the data. Those timings are not being used in benchmark results, other than validation that those grand total are fast, so they are made on already materialized results of query that created `ans` object.
Now when I changed ((in d262037)[https://github.com/h2oai/db-benchmark/commit/d2620379b8c8021e9073e33d597bc6cc6c5e94a6]) `.persist` to `.compute` they are evaluated as pandas, not dask, objects.


correct-runperiod-transitions (jasondegraw) - x86_64-Linux-Ubuntu-14.04-gcc-4.8: OK (3049 of 3050 tests passed, 18 test warnings)

Messages:

 * 3 tests had: EIO diffs.
 * 1 test had: Table big diffs.
 * 15 tests had: Table small diffs.

Failures:

regression Test Summary
 * Passed: 650
 * Failed: 1

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.97%25-yellow.png)


good job


![](https://github.trello.services/images/mini-trello-icon.png) [Create a Home Page](https://trello.com/c/vlwJdvel/1-create-a-home-page)


Hmm. Adding GC_register_displacement_inner(FINALIZER_CLOSURE_FLAG) does not help fully: https://travis-ci.org/ivmai/bdwgc/jobs/430756308


Checkmarx scan results 20 Sep 2018 09:29 UTC +03:00

High
Medium
Low
Info

New
0
0
0
0

Recurrent
0
0
0
0

Fixed
0
0
0
0

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a23cad998261c81bf63aa21ac681a2e8b5303e7c	@web-flow