[R/checkClasses.R:21:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L21) *style:* **Variable or function name should be snake_case.**
```r
checkClasses <- function(
^~~~~~~~~~~~
```
[R/checkClasses.R:26:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L26) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(expected)
    ^~~~~~~~~~~~~~
```
[R/checkClasses.R:27:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L27) *warning:* **no visible global function definition for ‘assert_has_names’**
```r
    assert_has_names(expected)
    ^~~~~~~~~~~~~~~~
```
[R/checkClasses.R:28:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L28) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(subset)
    ^~~~~~~~~~~~~~~~
```
[R/checkClasses.R:30:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L30) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(names(expected), names(object))
        ^~~~~~~~~~~~~~~~
```
[R/checkClasses.R:32:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/checkClasses.R#L32) *warning:* **no visible global function definition for ‘assert_are_set_equal’**
```r
        assert_are_set_equal(names(expected), names(object))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/detectHPC.R:21:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/detectHPC.R#L21) *style:* **Variable or function name should be snake_case.**
```r
detectHPC <- function() {
^~~~~~~~~
```
[R/dots.R:24:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L24) *warning:* **no visible global function definition for ‘eval_bare’**
```r
    dots <- eval_bare(substitute(alist(...)))
            ^~~~~~~~~
```
[R/dots.R:25:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L25) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(dots)
    ^~~~~~~~~~~~~~
```
[R/dots.R:26:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L26) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
    assert_is_non_empty(dots)
    ^~~~~~~~~~~~~~~~~~~
```
[R/dots.R:27:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L27) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(dots)
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/dots.R:28:28:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L28) *warning:* **no visible binding for global variable ‘assert_is_name’**
```r
    invisible(lapply(dots, assert_is_name))
                           ^~~~~~~~~~~~~~
```
[R/dots.R:32:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/dots.R#L32) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(names)
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:30:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L30) *warning:* **no visible global function definition for ‘assert_is_atomic’**
```r
        assert_is_atomic(x)
        ^~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:31:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L31) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:32:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L32) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
        assert_all_are_positive(n)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:64:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L64) *warning:* **no visible global function definition for ‘assert_has_dims’**
```r
        assert_has_dims(x)
        ^~~~~~~~~~~~~~~
```
[R/headtail-methods.R:65:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L65) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:66:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L66) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
        assert_all_are_positive(n)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/headtail-methods.R:117:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L117) *warning:* **no visible global function definition for ‘assert_that’**
```r
            assert_that(nrow(square) == n * 2L)
            ^~~~~~~~~~~
```
[R/headtail-methods.R:118:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/headtail-methods.R#L118) *warning:* **no visible global function definition for ‘assert_that’**
```r
            assert_that(ncol(square) == n * 2L)
            ^~~~~~~~~~~
```
[R/matchArgsToDoCall.R:42:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L42) *style:* **Variable or function name should be snake_case.**
```r
matchArgsToDoCall <- function(
^~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:44:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L44) *style:* **Variable or function name should be snake_case.**
```r
    removeFormals = NULL,
    ^~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:48:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L48) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(args, c("list", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:50:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L50) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
        assert_is_non_empty(args)
        ^~~~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:51:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L51) *warning:* **no visible global function definition for ‘assert_has_names’**
```r
        assert_has_names(args)
        ^~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:55:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L55) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(removeFormals, c("character", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:56:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L56) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
    assert_is_a_number(which)
    ^~~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:60:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L60) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(verbose)
    ^~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:67:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L67) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(list)
    ^~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:69:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L69) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(definition)
    ^~~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:71:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L71) *warning:* **no visible global function definition for ‘assert_is_call’**
```r
    assert_is_call(call)
    ^~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:74:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L74) *style:* **Variable or function name should be snake_case.**
```r
    callArgs <- as.list(call)[-1L] %>%
    ^~~~~~~~
```
[R/matchArgsToDoCall.R:124:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L124) *warning:* **no visible global function definition for ‘assert_all_are_non_missing_nor_empty_character’**
```r
    assert_all_are_non_missing_nor_empty_character(names(args))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:125:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L125) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(names(args))
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/matchArgsToDoCall.R:129:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L129) *warning:* **no visible global function definition for ‘assert_that’**
```r
            assert_that(!is.call(x))
            ^~~~~~~~~~~
```
[R/matchArgsToDoCall.R:130:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L130) *warning:* **no visible global function definition for ‘assert_that’**
```r
            assert_that(!is.name(x))
            ^~~~~~~~~~~
```
[R/matchArgsToDoCall.R:131:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/matchArgsToDoCall.R#L131) *warning:* **no visible global function definition for ‘assert_that’**
```r
            assert_that(!is.symbol(x))
            ^~~~~~~~~~~
```
[R/MethodDefinition.R:40:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L40) *style:* **Variable or function name should be snake_case.**
```r
methodFunction <- function(f, signature, where, package) {
^~~~~~~~~~~~~~
```
[R/MethodDefinition.R:53:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L53) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(isS4(generic))
    ^~~~~~~~~~~
```
[R/MethodDefinition.R:54:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L54) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(is(generic, "standardGeneric"))
    ^~~~~~~~~~~
```
[R/MethodDefinition.R:62:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L62) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(is(definition, "MethodDefinition"))
    ^~~~~~~~~~~
```
[R/MethodDefinition.R:68:16:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L68) *warning:* **no visible global function definition for ‘extractLocal’**
```r
        fun <- extractLocal(definition)
               ^~~~~~~~~~~~
```
[R/MethodDefinition.R:72:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L72) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(fun)
    ^~~~~~~~~~~~~~~~~~
```
[R/MethodDefinition.R:81:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L81) *style:* **Variable or function name should be snake_case.**
```r
methodFormals <- function(f, signature, where, package) {
^~~~~~~~~~~~~
```
[R/MethodDefinition.R:97:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L97) *style:* **Variable or function name should be snake_case.**
```r
hasLocal <- function(definition) {
^~~~~~~~
```
[R/MethodDefinition.R:98:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L98) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(is(definition, "MethodDefinition"))
    ^~~~~~~~~~~
```
[R/MethodDefinition.R:99:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L99) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(definition)
    ^~~~~~~~~~~~~~~~~~
```
[R/MethodDefinition.R:117:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L117) *style:* **Variable or function name should be snake_case.**
```r
extractLocal <- function(definition) {
^~~~~~~~~~~~
```
[R/MethodDefinition.R:118:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L118) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(hasLocal(definition))
    ^~~~~~~~~~~
```
[R/MethodDefinition.R:118:17:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L118) *warning:* **no visible global function definition for ‘hasLocal’**
```r
    assert_that(hasLocal(definition))
                ^~~~~~~~
```
[R/MethodDefinition.R:121:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/MethodDefinition.R#L121) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(local)
    ^~~~~~~~~~~~~~~~~~
```
[R/multiassignAsEnvir.R:17:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L17) *style:* **Variable or function name should be snake_case.**
```r
multiassignAsEnvir <- function(
^~~~~~~~~~~~~~~~~~
```
[R/multiassignAsEnvir.R:19:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L19) *style:* **Variable or function name should be snake_case.**
```r
    envirName,
    ^~~~~~~~~
```
[R/multiassignAsEnvir.R:20:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L20) *style:* **Variable or function name should be snake_case.**
```r
    parentFrame = parent.frame()
    ^~~~~~~~~~~
```
[R/multiassignAsEnvir.R:23:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L23) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(dots)
    ^~~~~~~~~~~~~~
```
[R/multiassignAsEnvir.R:25:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L25) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(names)
    ^~~~~~~~~~~~~~~~~~~
```
[R/multiassignAsEnvir.R:26:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L26) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(envirName)
    ^~~~~~~~~~~~~~~~~~
```
[R/multiassignAsEnvir.R:27:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/multiassignAsEnvir.R#L27) *warning:* **no visible global function definition for ‘assert_is_environment’**
```r
    assert_is_environment(parentFrame)
    ^~~~~~~~~~~~~~~~~~~~~
```
[R/parseRd.R:30:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/parseRd.R#L30) *style:* **Variable or function name should be snake_case.**
```r
parseRd <- function(object, tag) {
^~~~~~~
```
[R/parseRd.R:31:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/parseRd.R#L31) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "Rd")
    ^~~~~~~~~~~~~~~~
```
[R/parseRd.R:32:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/parseRd.R#L32) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(tag)
    ^~~~~~~~~~~~~~~~~~
```
[R/parseRd.R:34:13:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/parseRd.R#L34) *warning:* **no visible global function definition for ‘RdTags’**
```r
    tags <- RdTags(object)
            ^~~~~~
```
[R/parseRd.R:35:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/parseRd.R#L35) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
    assert_is_subset(tag, tags)
    ^~~~~~~~~~~~~~~~
```
[R/printString.R:17:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/printString.R#L17) *style:* **Variable or function name should be snake_case.**
```r
printString <- function(x, max = 100L) {
^~~~~~~~~~~
```
[R/printString.R:18:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/printString.R#L18) *warning:* **no visible global function definition for ‘assert_is_atomic’**
```r
    assert_is_atomic(x)
    ^~~~~~~~~~~~~~~~
```
[R/printString.R:19:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/printString.R#L19) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(length(x) <= max)
    ^~~~~~~~~~~
```
[R/RdTags.R:14:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/RdTags.R#L14) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "Rd")
    ^~~~~~~~~~~~~~~~
```
[R/separator.R:22:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/separator.R#L22) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
    assertIsAnImplicitInteger(times)
    ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/showSlotInfo.R:6:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/showSlotInfo.R#L6) *style:* **Variable or function name should be snake_case.**
```r
showSlotInfo <- function(list) {
^~~~~~~~~~~~
```
[R/showSlotInfo.R:7:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/showSlotInfo.R#L7) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(list)
    ^~~~~~~~~~~~~~
```
[R/showSlotInfo.R:14:24:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/showSlotInfo.R#L14) *warning:* **no visible binding for global variable ‘has_length’**
```r
    list <- Filter(f = has_length, x = list)
                       ^~~~~~~~~~
```
[R/showSlotInfo.R:28:44:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/showSlotInfo.R#L28) *warning:* **no visible global function definition for ‘headtail’**
```r
                    info <- capture.output(headtail(x))
                                           ^~~~~~~~
```
[R/standardizeCall.R:47:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L47) *style:* **Variable or function name should be snake_case.**
```r
standardizeCall <- function(
^~~~~~~~~~~~~~~
```
[R/standardizeCall.R:52:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L52) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
    assert_is_a_number(which)
    ^~~~~~~~~~~~~~~~~~
```
[R/standardizeCall.R:53:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L53) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
    assert_all_are_non_negative(which)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/standardizeCall.R:58:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L58) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(verbose)
    ^~~~~~~~~~~~~~~~
```
[R/standardizeCall.R:62:15:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L62) *warning:* **no visible global function definition for ‘.isLocalCall’**
```r
    .local <- .isLocalCall(sys.call(which = which))
              ^~~~~~~~~~~~
```
[R/standardizeCall.R:85:9:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L85) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(!isTRUE(.isLocalCall(call)))
        ^~~~~~~~~~~
```
[R/standardizeCall.R:85:29:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L85) *warning:* **no visible global function definition for ‘.isLocalCall’**
```r
        assert_that(!isTRUE(.isLocalCall(call)))
                            ^~~~~~~~~~~~
```
[R/standardizeCall.R:90:27:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L90) *warning:* **no visible global function definition for ‘extractLocal’**
```r
            definition <- extractLocal(definition)
                          ^~~~~~~~~~~~
```
[R/standardizeCall.R:115:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L115) *warning:* **no visible global function definition for ‘assert_is_call’**
```r
    assert_is_call(call)
    ^~~~~~~~~~~~~~
```
[R/standardizeCall.R:119:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L119) *warning:* **no visible global function definition for ‘assert_all_are_non_missing_nor_empty_character’**
```r
    assert_all_are_non_missing_nor_empty_character(names(as.list(call)[-1L]))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/standardizeCall.R:130:1:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L130) *style:* **Variable or function name should be snake_case.**
```r
.isLocalCall <- function(call) {
^~~~~~~~~~~~
```
[R/standardizeCall.R:131:5:](https://github.com/steinbaugh/basejump.developer/blob/df633d433348ed2523bbee19d7598cb91008c366/R/standardizeCall.R#L131) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(is(call, "call"))
    ^~~~~~~~~~~
```


Probably shouldn't be value if it's an Int, but instead total payout.


Some small comments in addition to totalstake being counted dynamically as opposed to an integer value.


move js to new .js file


I tested the report generator by starting Core module and verifying that when the scheduled report jobs ran, they didn't fail. In addition to this, i also added a unit test.


Yes, that could be a good idea .


This (`getValues`) is not memory safe.
```methods::callGeneric(0, getValues(e1)) ) ```
But you cannot do
```methods::callGeneric(0, e1) ```
As it would match the class of "0"


The changes above and in zzz/R don't seem to be enough, as in case of private datasets you still need to provide the API key, while R/package_search.R, line 63 explicitly suppresses that.


Just gets stuck on loading information


[FormGroup] add contentClassName and style props (#3120)

Previews: documentation | landing | table


Fixed


saw approval from jonjove
at https://github.com/MonsieurNicolas/stellar-core/commit/8ce9f678cb8577b9506939c3e7e1e310b931dab4


merging MonsieurNicolas/stellar-core/fixCrank = 8ce9f678 into auto


MonsieurNicolas/stellar-core/fixCrank = 8ce9f678 merged ok, testing candidate = 073cb708


[R/pheatmap-internal.R:1:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L1) *style:* **Variable or function name should be snake_case.**
```r
.emptyPheatmapAnnotations <- list(
^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:10:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L10) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapAnnotations <- function(
^~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:13:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L13) *style:* **Variable or function name should be snake_case.**
```r
    legendColor
    ^~~~~~~~~~~
```
[R/pheatmap-internal.R:16:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L16) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(blacklist)
    ^~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:17:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L17) *warning:* **no visible global function definition for ‘assertIsHexColorFunctionOrNULL’**
```r
    assertIsHexColorFunctionOrNULL(legendColor)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:20:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L20) *warning:* **no visible global function definition for ‘colData’**
```r
    data <- colData(object)
            ^~~~~~~
```
[R/pheatmap-internal.R:21:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L21) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:29:16:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L29) *warning:* **no visible binding for global variable ‘.emptyPheatmapAnnotations’**
```r
        return(.emptyPheatmapAnnotations)
               ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:32:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L32) *warning:* **no visible global function definition for ‘assertHasRownames’**
```r
    assertHasRownames(data)
    ^~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:51:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L51) *style:* **Variable or function name should be snake_case.**
```r
    hasLevels <- vapply(
    ^~~~~~~~~
```
[R/pheatmap-internal.R:61:16:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L61) *warning:* **no visible binding for global variable ‘.emptyPheatmapAnnotations’**
```r
        return(.emptyPheatmapAnnotations)  # nocov
               ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:74:17:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L74) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
                assert_is_factor(x)
                ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:96:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L96) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapArgs <- function(args) {
^~~~~~~~~~~~~
```
[R/pheatmap-internal.R:97:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L97) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(args)
    ^~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:98:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L98) *warning:* **no visible global function definition for ‘assert_has_names’**
```r
    assert_has_names(args)
    ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:100:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L100) *style:* **Variable or function name should be snake_case.**
```r
    invalidNames <- grep("[._]", names(args), value = TRUE)
    ^~~~~~~~~~~~
```
[R/pheatmap-internal.R:107:20:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L107) *warning:* **no visible global function definition for ‘snake’, Did you mean 'save'?**
```r
    names(args) <- snake(names(args))
                   ^~~~~
```
[R/pheatmap-internal.R:108:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L108) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
    assert_is_subset(names(args), formalArgs(pheatmap))
    ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:108:46:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L108) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
    assert_is_subset(names(args), formalArgs(pheatmap))
                                             ^~~~~~~~
```
[R/pheatmap-internal.R:109:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L109) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(names(args))
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:116:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L116) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapColorPalette <- function(color = NULL, n = 256L) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:120:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L120) *warning:* **no visible global function definition for ‘assert_all_are_hex_colors’**
```r
        assert_all_are_hex_colors(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:125:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L125) *warning:* **no visible global function definition for ‘assertIsHexColorFunctionOrNULL’**
```r
        assertIsHexColorFunctionOrNULL(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:129:30:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/pheatmap-internal.R#L129) *warning:* **no visible global function definition for ‘brewer.pal’**
```r
        colorRampPalette(rev(brewer.pal(n = 7L, name = "RdYlBu")))(n)
                             ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:39:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L39) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L41) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts"
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:44:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L44) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:45:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L45) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:46:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L46) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:50:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L50) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:51:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L51) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(trans)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:52:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L52) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:54:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L54) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData(object)
        ^~~~~~~
```
[R/plotCountsPerBiotype-methods.R:59:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L59) *style:* **Variable or function name should be snake_case.**
```r
            biotypeCol <- "transcriptBiotype"
            ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:61:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L61) *style:* **Variable or function name should be snake_case.**
```r
            biotypeCol <- "geneBiotype"
            ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:63:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L63) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(biotypeCol, colnames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:79:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L79) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:104:21:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘rename’, Did you mean 'unname'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                    ^~~~~~
```
[R/plotCountsPerBiotype-methods.R:104:36:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:104:36:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:104:52:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                                   ^~
```
[R/plotCountsPerBiotype-methods.R:180:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L180) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:182:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L182) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts"
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:185:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L185) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:186:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L186) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:190:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L190) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:191:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L191) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(trans)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:192:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L192) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:194:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L194) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData(object)
        ^~~~~~~
```
[R/plotCountsPerBiotype-methods.R:197:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L197) *style:* **Variable or function name should be snake_case.**
```r
        biotypeCol <- "broadClass"
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:198:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L198) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(biotypeCol, colnames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:212:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L212) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:236:21:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘rename’, Did you mean 'unname'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                    ^~~~~~
```
[R/plotCountsPerBiotype-methods.R:236:36:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:236:36:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:236:52:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                                   ^~
```
[R/plotCountsPerGene-methods.R:31:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L31) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:37:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L37) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts",
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L41) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:42:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L42) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:46:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L46) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:49:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L49) *warning:* **no visible global function definition for ‘assertIsFillScaleDiscreteOrNULL’**
```r
        assertIsFillScaleDiscreteOrNULL(fill)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:50:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L50) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(flip)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:51:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L51) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:52:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L52) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:70:14:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L70) *warning:* **no visible global function definition for ‘ggplot’, Did you mean 'biplot'?**
```r
        p <- ggplot(data = data)
             ^~~~~~
```
[R/plotCountsPerGene-methods.R:124:22:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L124) *warning:* **no visible global function definition for ‘coord_flip’**
```r
            p <- p + coord_flip()
                     ^~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:128:22:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotCountsPerGene-methods.R#L128) *warning:* **no visible global function definition for ‘guides’**
```r
            p <- p + guides(color = FALSE, fill = FALSE)
                     ^~~~~~
```
[R/plotGenderMarkers-methods.R:22:21:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L22) *warning:* **no visible binding for global variable ‘object’, Did you mean 'objects'?**
```r
        validObject(object)
                    ^~~~~~
```
[R/plotGenderMarkers-methods.R:25:30:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L25) *warning:* **no visible binding for global variable ‘object’, Did you mean 'objects'?**
```r
        organism <- organism(object)
                             ^~~~~~
```
[R/plotGenderMarkers-methods.R:33:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L33) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(markers)
        ^~~~~~~~~~~~~~
```
[R/plotGenderMarkers-methods.R:36:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L36) *style:* **Variable or function name should be snake_case.**
```r
        supportedOrganisms <- names(markers) %>%
        ^~~~~~~~~~~~~~~~~~
```
[R/plotGenderMarkers-methods.R:47:29:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L47) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
        markers <- markers[[camel(organism)]]
                            ^~~~~
```
[R/plotGenderMarkers-methods.R:48:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenderMarkers-methods.R#L48) *warning:* **no visible global function definition for ‘assert_is_tbl_df’**
```r
        assert_is_tbl_df(markers)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:41:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L41) *style:* **Variable or function name should be snake_case.**
```r
.plotGeneFacet <- function(
^~~~~~~~~~~~~~
```
[R/plotGene-methods.R:43:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L43) *style:* **Variable or function name should be snake_case.**
```r
    countsAxisLabel = "counts",
    ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:44:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L44) *style:* **Variable or function name should be snake_case.**
```r
    medianLine = TRUE,
    ^~~~~~~~~~
```
[R/plotGene-methods.R:48:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L48) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "SummarizedExperiment")
    ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:49:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L49) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:52:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L52) *warning:* **no visible global function definition for ‘meltCounts’**
```r
    data <- meltCounts(object)
            ^~~~~~~~~~
```
[R/plotGene-methods.R:74:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L74) *warning:* **no visible binding for global variable ‘.geneMedianLine’**
```r
        p <- p + .geneMedianLine
                 ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:82:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L82) *warning:* **no visible global function definition for ‘guides’**
```r
        p <- p + guides(color = FALSE)
                 ^~~~~~
```
[R/plotGene-methods.R:90:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L90) *style:* **Variable or function name should be snake_case.**
```r
.plotGeneWide <- function(
^~~~~~~~~~~~~
```
[R/plotGene-methods.R:92:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L92) *style:* **Variable or function name should be snake_case.**
```r
    countsAxisLabel = "counts",
    ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:93:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L93) *style:* **Variable or function name should be snake_case.**
```r
    medianLine = TRUE,
    ^~~~~~~~~~
```
[R/plotGene-methods.R:97:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L97) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "SummarizedExperiment")
    ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:98:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L98) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:101:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L101) *warning:* **no visible global function definition for ‘meltCounts’**
```r
    data <- meltCounts(object)
            ^~~~~~~~~~
```
[R/plotGene-methods.R:122:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L122) *warning:* **no visible binding for global variable ‘.geneMedianLine’**
```r
        p <- p + .geneMedianLine
                 ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:140:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L140) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:141:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L141) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts",
        ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:142:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L142) *style:* **Variable or function name should be snake_case.**
```r
        medianLine = TRUE,
        ^~~~~~~~~~
```
[R/plotGene-methods.R:149:19:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L149) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:150:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L150) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
        assert_is_character(genes)
        ^~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:152:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L152) *warning:* **no visible global function definition for ‘assert_all_are_in_closed_range’**
```r
        assert_all_are_in_closed_range(length(genes), lower = 1L, upper = 20L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:153:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L153) *warning:* **no visible global function definition for ‘mapGenesToRownames’**
```r
        genes <- mapGenesToRownames(object, genes = genes, strict = FALSE)
                 ^~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:154:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L154) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:155:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L155) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:159:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L159) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:160:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L160) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(medianLine)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:161:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L161) *warning:* **no visible global function definition for ‘assertIsColorScaleDiscreteOrNULL’**
```r
        assertIsColorScaleDiscreteOrNULL(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:162:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L162) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(legend)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:166:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L166) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        assay <- assays(object)[[assay]]
                 ^~~~~~
```
[R/plotGene-methods.R:167:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L167) *warning:* **no visible global function definition for ‘assays<-’**
```r
        assays(object) <- list(assay = assay)
        ^~~~~~
```
[R/plotGene-methods.R:172:19:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L172) *warning:* **no visible global function definition for ‘convertGenesToSymbols’**
```r
        object <- convertGenesToSymbols(object)
                  ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:176:21:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L176) *warning:* **no visible binding for global variable ‘.plotGeneFacet’**
```r
            what <- .plotGeneFacet
                    ^~~~~~~~~~~~~~
```
[R/plotGene-methods.R:178:21:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGene-methods.R#L178) *warning:* **no visible binding for global variable ‘.plotGeneWide’**
```r
            what <- .plotGeneWide
                    ^~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:24:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L24) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:26:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L26) *style:* **Variable or function name should be snake_case.**
```r
        minCounts = 1L,
        ^~~~~~~~~
```
[R/plotGenesDetected-methods.R:32:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L32) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:33:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L33) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:37:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L37) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:38:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L38) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(limit)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:39:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L39) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(limit)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:40:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L40) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(minCounts)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L41) *warning:* **no visible global function definition for ‘assert_all_are_in_range’**
```r
        assert_all_are_in_range(minCounts, lower = 1L, upper = Inf)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:42:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L42) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(minCounts)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:43:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L43) *warning:* **no visible global function definition for ‘assertIsFillScaleDiscreteOrNULL’**
```r
        assertIsFillScaleDiscreteOrNULL(fill)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:44:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L44) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(flip)
        ^~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:45:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L45) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:47:19:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L47) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        counts <- assays(object)[[assay]]
                  ^~~~~~
```
[R/plotGenesDetected-methods.R:48:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L48) *style:* **Variable or function name should be snake_case.**
```r
        geneCount <- colSums(counts >= minCounts)
        ^~~~~~~~~
```
[R/plotGenesDetected-methods.R:73:22:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L73) *warning:* **no visible global function definition for ‘basejump_geom_abline’**
```r
            p <- p + basejump_geom_abline(yintercept = limit)
                     ^~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:81:22:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L81) *warning:* **no visible global function definition for ‘coord_flip’**
```r
            p <- p + coord_flip()
                     ^~~~~~~~~~
```
[R/plotGenesDetected-methods.R:85:22:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotGenesDetected-methods.R#L85) *warning:* **no visible global function definition for ‘guides’**
```r
            p <- p + guides(fill = FALSE)
                     ^~~~~~
```
[R/plotHeatmap-methods.R:111:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L111) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:113:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L113) *style:* **Variable or function name should be snake_case.**
```r
        clusterRows = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:114:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L114) *style:* **Variable or function name should be snake_case.**
```r
        clusterCols = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:115:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L115) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = FALSE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:116:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L116) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:117:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L117) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:118:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L118) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:120:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L120) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:121:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L121) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:126:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L126) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:127:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L127) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:128:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L128) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:129:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L129) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:134:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L134) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:137:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L137) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterCols)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:138:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L138) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterRows)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:139:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L139) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showColnames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:140:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L140) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showRownames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:141:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L141) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightRow)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:142:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L142) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightCol)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:143:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L143) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(treeheightRow, treeheightCol)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:144:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L144) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:146:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L146) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:148:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L148) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:154:19:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L154) *warning:* **no visible global function definition for ‘convertGenesToSymbols’**
```r
        object <- convertGenesToSymbols(object)
                  ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:157:26:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L157) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        mat <- as.matrix(assays(object)[[assay]])
                         ^~~~~~
```
[R/plotHeatmap-methods.R:170:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L170) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(x)
        ^~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:175:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L175) *style:* **Variable or function name should be snake_case.**
```r
        annotationCol <- x[["annotationCol"]]
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:176:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L176) *style:* **Variable or function name should be snake_case.**
```r
        annotationColors <- x[["annotationColors"]]
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:179:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L179) *warning:* **no visible global function definition for ‘.pheatmapColorPalette’**
```r
        color <- .pheatmapColorPalette(color)
                 ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:182:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L182) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- tryCatch(
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:213:17:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L213) *warning:* **no visible global function definition for ‘.pheatmapArgs’**
```r
        args <- .pheatmapArgs(args)
                ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:214:24:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L214) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
        do.call(what = pheatmap, args = args)
                       ^~~~~~~~
```
[R/plotHeatmap-methods.R:223:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L223) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:225:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L225) *style:* **Variable or function name should be snake_case.**
```r
        clusteringMethod = "ward.D2",
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:226:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L226) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:227:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L227) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:228:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L228) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:229:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L229) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:231:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L231) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:232:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L232) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:237:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L237) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:238:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L238) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:239:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L239) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:240:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L240) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:245:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L245) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:248:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L248) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(clusteringMethod)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:249:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L249) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showColnames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:250:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L250) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showRownames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:251:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L251) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightRow)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:252:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L252) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightCol)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:253:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L253) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(treeheightRow, treeheightCol)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:254:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L254) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:256:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L256) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:265:26:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L265) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        mat <- as.matrix(assays(object)[[assay]])
                         ^~~~~~
```
[R/plotHeatmap-methods.R:273:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L273) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(x)
        ^~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:278:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L278) *style:* **Variable or function name should be snake_case.**
```r
        annotationCol <- x[["annotationCol"]]
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:279:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L279) *style:* **Variable or function name should be snake_case.**
```r
        annotationColors <- x[["annotationColors"]]
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:282:18:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L282) *warning:* **no visible global function definition for ‘.pheatmapColorPalette’**
```r
        color <- .pheatmapColorPalette(color)
                 ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:285:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L285) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- tryCatch(
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:317:17:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L317) *warning:* **no visible global function definition for ‘.pheatmapArgs’**
```r
        args <- .pheatmapArgs(args)
                ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:322:24:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L322) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
        do.call(what = pheatmap, args = args)
                       ^~~~~~~~
```
[R/plotHeatmap-methods.R:327:1:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L327) *style:* **Variable or function name should be snake_case.**
```r
.quantileBreaks <- function(object, n = 10L) {
^~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:328:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L328) *warning:* **no visible global function definition for ‘assert_is_matrix’**
```r
    assert_is_matrix(object)
    ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:329:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L329) *warning:* **no visible global function definition for ‘assert_is_an_integer’**
```r
    assert_is_an_integer(n)
    ^~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:330:5:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L330) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
    assert_all_are_positive(n)
    ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:341:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L341) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:343:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L343) *style:* **Variable or function name should be snake_case.**
```r
        clusterRows = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:344:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L344) *style:* **Variable or function name should be snake_case.**
```r
        clusterCols = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:345:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L345) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = FALSE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:346:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L346) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:347:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L347) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:348:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L348) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:350:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L350) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:352:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L352) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:357:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L357) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:358:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L358) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:359:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L359) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:360:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L360) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:365:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L365) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:367:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L367) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:369:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L369) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterCols)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:370:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L370) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterRows)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:371:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L371) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(legend)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:372:9:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L372) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:374:13:](https://github.com/steinbaugh/basejump.plots/blob/3494ce3612621f37cc784dccb39816a2cfec6cae/R/plotHeatmap-methods.R#L374) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```


		for (String examine : item.getExamine())
				{
					b.append(" ").append(examine);
					b.append("</br>");
				}
forgot this, removed it because of a error.


Successfully aliased the URL <https://tanya-ermolaeva-hyxljfuqkm.now.sh> to the following alias.

* https://tanya-ermolaeva.now.sh


I changed the license because I didn't need the whole thing (By the way, it was made by me)


If you leave these at `1`, then double attack and triple attack won't give extra attacks when they should.


See https://github.com/rspatial/raster/commit/d5526bc0e353fb4355efac3c7368b49ccfdc8af1


>
>
> ![catmagik](https://user-images.githubusercontent.com/5001057/47882344-7d2e1e80-de29-11e8-8fe4-30c31863fc2c.gif)

same


Que tigre que tu fez aqui hein !? huahauhahauha