[R/aggregate-methods.R:122:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L122) *style:* **Variable or function name should be snake_case.**
```r
.aggregateFuns <- c("sum", "mean")
^~~~~~~~~~~~~~
```
[R/aggregate-methods.R:127:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L127) *style:* **Variable or function name should be snake_case.**
```r
.aggregateMessage <- function(groupings, fun) {
^~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:128:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L128) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
    assert_is_factor(groupings)
    ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:129:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L129) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(fun)
    ^~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:153:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L153) *warning:* **no visible global function definition for ‘assertHasValidDimnames’**
```r
        assertHasValidDimnames(object)
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:154:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L154) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(groupings)
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:155:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L155) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(object), names(groupings))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:156:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L156) *warning:* **no visible global function definition for ‘assertAllAreValidNames’**
```r
        assertAllAreValidNames(levels(groupings))
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:158:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L158) *warning:* **no visible global function definition for ‘.aggregateMessage’**
```r
        .aggregateMessage(groupings, fun = fun)
        ^~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:220:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L220) *warning:* **no visible global function definition for ‘assertHasValidDimnames’**
```r
        assertHasValidDimnames(object)
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:221:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L221) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(groupings)
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:222:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L222) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(object), names(groupings))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:223:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L223) *warning:* **no visible global function definition for ‘assertAllAreValidNames’**
```r
        assertAllAreValidNames(levels(groupings))
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:225:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L225) *warning:* **no visible global function definition for ‘.aggregateMessage’**
```r
        .aggregateMessage(groupings, fun = fun)
        ^~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:281:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L281) *warning:* **no visible global function definition for ‘assertHasValidDimnames’**
```r
        assertHasValidDimnames(object)
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:282:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L282) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(col)
        ^~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:286:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L286) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(col, colnames(rowData(object)))
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:286:40:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L286) *warning:* **no visible global function definition for ‘rowData’**
```r
        assert_is_subset(col, colnames(rowData(object)))
                                       ^~~~~~~
```
[R/aggregate-methods.R:287:22:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L287) *warning:* **no visible global function definition for ‘rowData’**
```r
        groupings <- rowData(object)[[col]]
                     ^~~~~~~
```
[R/aggregate-methods.R:288:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L288) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(groupings)
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:289:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L289) *warning:* **no visible global function definition for ‘assertAllAreValidNames’**
```r
        assertAllAreValidNames(levels(groupings))
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:312:36:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L312) *warning:* **no visible global function definition for ‘emptyRanges’**
```r
            args[["rowRanges"]] <- emptyRanges(names = rownames)
                                   ^~~~~~~~~~~
```
[R/aggregate-methods.R:314:34:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L314) *warning:* **no visible global function definition for ‘DataFrame’**
```r
            args[["rowData"]] <- DataFrame(row.names = rownames)
                                 ^~~~~~~~~
```
[R/aggregate-methods.R:316:30:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L316) *warning:* **no visible binding for global variable ‘SummarizedExperiment’**
```r
        se <- do.call(what = SummarizedExperiment, args = args)
                             ^~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:337:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L337) *warning:* **no visible global function definition for ‘assertHasValidDimnames’**
```r
        assertHasValidDimnames(object)
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:338:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L338) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(col)
        ^~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:342:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L342) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(col, colnames(colData(object)))
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:342:40:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L342) *warning:* **no visible global function definition for ‘colData’**
```r
        assert_is_subset(col, colnames(colData(object)))
                                       ^~~~~~~
```
[R/aggregate-methods.R:343:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L343) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(col, colnames(sampleData(object)))
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:344:22:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L344) *warning:* **no visible global function definition for ‘colData’**
```r
        groupings <- colData(object)[[col]]
                     ^~~~~~~
```
[R/aggregate-methods.R:345:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L345) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(groupings)
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:346:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L346) *warning:* **no visible global function definition for ‘assertAllAreValidNames’**
```r
        assertAllAreValidNames(levels(groupings))
        ^~~~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:364:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L364) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- sampleData(object)[["aggregate"]]
        ^~~~~~~~~~~
```
[R/aggregate-methods.R:365:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L365) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(sampleNames)
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:366:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L366) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- levels(sampleNames)
        ^~~~~~~~~~~
```
[R/aggregate-methods.R:367:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L367) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- DataFrame(
        ^~~~~~~~~~
```
[R/aggregate-methods.R:378:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L378) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- setdiff(interestingGroups(object), "sampleName")
        ^~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:379:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L379) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/aggregate-methods.R:389:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L389) *warning:* **no visible global function definition for ‘assertHasRownames’**
```r
        assertHasRownames(sampleData)
        ^~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:397:20:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L397) *warning:* **no visible global function definition for ‘rowRanges’**
```r
            args[["rowRanges"]] <- rowRanges(object)
                   ^~~~~~~~~
```
[R/aggregate-methods.R:399:20:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L399) *warning:* **no visible global function definition for ‘rowData’**
```r
            args[["rowData"]] <- rowData(object)
                   ^~~~~~~
```
[R/aggregate-methods.R:401:30:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L401) *warning:* **no visible binding for global variable ‘SummarizedExperiment’**
```r
        se <- do.call(what = SummarizedExperiment, args = args)
                             ^~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:402:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L402) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(se)[["aggregate"]] <- TRUE
        ^~~~~~~~
```
[R/aggregate-methods.R:402:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L402) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(se)[["aggregate"]] <- TRUE
        ^~~~~~~~
```
[R/aggregate-methods.R:427:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L427) *style:* **Variable or function name should be snake_case.**
```r
        colData <- colData(object)
        ^~~~~~~
```
[R/aggregate-methods.R:428:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L428) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(c("sampleID", "aggregate"), colnames(colData))
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:429:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L429) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
        assert_is_factor(colData[["aggregate"]])
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:463:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L463) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(names(groupings), colnames(object))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:464:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L464) *warning:* **no visible global function definition for ‘colData<-’, Did you mean 'colData'?**
```r
        colData(object)[["aggregate"]] <- groupings
        ^~~~~~~
```
[R/aggregate-methods.R:472:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L472) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
        assert_is_all_of(rse, "RangedSummarizedExperiment")
        ^~~~~~~~~~~~~~~~
```
[R/aggregate-methods.R:475:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregate-methods.R#L475) *style:* **Variable or function name should be snake_case.**
```r
        colData <- colData(rse)
        ^~~~~~~
```
[R/aggregateCellsToSamples-methods.R:28:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregateCellsToSamples-methods.R#L28) *warning:* **no visible global function definition for ‘colData’**
```r
        colData(rse)[["aggregate"]] <- cell2sample(object)
        ^~~~~~~
```
[R/aggregateCellsToSamples-methods.R:28:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregateCellsToSamples-methods.R#L28) *warning:* **no visible global function definition for ‘colData<-’**
```r
        colData(rse)[["aggregate"]] <- cell2sample(object)
        ^~~~~~~
```
[R/aggregateCellsToSamples-methods.R:28:40:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/aggregateCellsToSamples-methods.R#L28) *warning:* **no visible global function definition for ‘cell2sample’**
```r
        colData(rse)[["aggregate"]] <- cell2sample(object)
                                       ^~~~~~~~~~~
```
[R/cell2sample-methods.R:33:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/cell2sample-methods.R#L33) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset("sampleID", colnames(colData(object)))
        ^~~~~~~~~~~~~~~~
```
[R/cell2sample-methods.R:36:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/cell2sample-methods.R#L36) *style:* **Variable or function name should be snake_case.**
```r
        colData <- colData(object)
        ^~~~~~~
```
[R/cell2sample-methods.R:40:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/cell2sample-methods.R#L40) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
            assert_is_factor(sample)
            ^~~~~~~~~~~~~~~~
```
[R/combine-methods.R:80:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L80) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(class(x), class(y))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:91:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L91) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(x), rownames(y))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:94:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L94) *warning:* **no visible global function definition for ‘assert_are_disjoint_sets’**
```r
        assert_are_disjoint_sets(colnames(x), colnames(y))
        ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:124:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L124) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
            assert_are_identical(rowRanges(x), rowRanges(y))
            ^~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:125:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L125) *style:* **Variable or function name should be snake_case.**
```r
            rowRanges <- rowRanges(x)
            ^~~~~~~~~
```
[R/combine-methods.R:126:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L126) *style:* **Variable or function name should be snake_case.**
```r
            rowData <- NULL
            ^~~~~~~
```
[R/combine-methods.R:128:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L128) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
            assert_are_identical(rowData(x), rowData(y))
            ^~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:129:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L129) *style:* **Variable or function name should be snake_case.**
```r
            rowData <- rowData(x)
            ^~~~~~~
```
[R/combine-methods.R:130:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L130) *style:* **Variable or function name should be snake_case.**
```r
            rowRanges <- NULL
            ^~~~~~~~~
```
[R/combine-methods.R:134:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L134) *warning:* **no visible global function definition for ‘assert_are_set_equal’**
```r
        assert_are_set_equal(colnames(colData(x)), colnames(colData(y)))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/combine-methods.R:136:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L136) *style:* **Variable or function name should be snake_case.**
```r
        colData <- rbind(
        ^~~~~~~
```
[R/combine-methods.R:155:30:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/combine-methods.R#L155) *warning:* **no visible binding for global variable ‘makeSummarizedExperiment’**
```r
        se <- do.call(what = makeSummarizedExperiment, args = args)
                             ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:59:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L59) *warning:* **no visible global function definition for ‘assert_all_are_non_missing_nor_empty_character’**
```r
        assert_all_are_non_missing_nor_empty_character(object)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:60:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L60) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
        assert_is_all_of(gene2symbol, "Gene2Symbol")
        ^~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:121:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L121) *style:* **Variable and function names should not be longer than 30 characters.**
```r
convertGenesToSymbols.sparseMatrix <- convertGenesToSymbols.matrix
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:121:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L121) *style:* **Variable or function name should be snake_case.**
```r
convertGenesToSymbols.sparseMatrix <- convertGenesToSymbols.matrix
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:136:16:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L136) *warning:* **no visible global function definition for ‘Gene2Symbol’**
```r
        g2s <- Gene2Symbol(object)
               ^~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:138:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L138) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
        assert_has_no_duplicates(symbols)
        ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:167:16:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L167) *warning:* **no visible global function definition for ‘Gene2Symbol’**
```r
        g2s <- Gene2Symbol(object)
               ^~~~~~~~~~~
```
[R/convertGenesToSymbols-methods.R:172:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertGenesToSymbols-methods.R#L172) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
        assert_has_no_duplicates(g2s[["geneID"]])
        ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertSampleIDsToNames-methods.R:22:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertSampleIDsToNames-methods.R#L22) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- sampleNames(object)
        ^~~~~~~~~~~
```
[R/convertSampleIDsToNames-methods.R:30:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertSampleIDsToNames-methods.R#L30) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
            assert_has_no_duplicates(colnames)
            ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertSampleIDsToNames-methods.R:32:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertSampleIDsToNames-methods.R#L32) *warning:* **no visible global function definition for ‘colData’**
```r
            colData(object)[["sampleName"]] <- NULL
            ^~~~~~~
```
[R/convertSampleIDsToNames-methods.R:32:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertSampleIDsToNames-methods.R#L32) *warning:* **no visible global function definition for ‘colData<-’**
```r
            colData(object)[["sampleName"]] <- NULL
            ^~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:65:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L65) *warning:* **no visible global function definition for ‘assert_all_are_non_missing_nor_empty_character’**
```r
        assert_all_are_non_missing_nor_empty_character(object)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:66:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L66) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
        assert_has_no_duplicates(object)
        ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:67:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L67) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
        assert_is_all_of(tx2gene, "Tx2Gene")
        ^~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:102:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L102) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(aggregate)
        ^~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:111:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L111) *warning:* **no visible global function definition for ‘aggregateRows’**
```r
            aggregateRows(object, groupings = t2g)
            ^~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:130:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L130) *style:* **Variable and function names should not be longer than 30 characters.**
```r
convertTranscriptsToGenes.sparseMatrix <- convertTranscriptsToGenes.matrix
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:130:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L130) *style:* **Variable or function name should be snake_case.**
```r
convertTranscriptsToGenes.sparseMatrix <- convertTranscriptsToGenes.matrix
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/convertTranscriptsToGenes-methods.R:147:16:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/convertTranscriptsToGenes-methods.R#L147) *warning:* **no visible global function definition for ‘Tx2Gene’**
```r
        t2g <- Tx2Gene(object)
               ^~~~~~~
```
[R/counts-methods.R:38:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/counts-methods.R#L38) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset("counts", assayNames(object))
        ^~~~~~~~~~~~~~~~
```
[R/counts-methods.R:38:36:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/counts-methods.R#L38) *warning:* **no visible global function definition for ‘assayNames’**
```r
        assert_is_subset("counts", assayNames(object))
                                   ^~~~~~~~~~
```
[R/counts-methods.R:39:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/counts-methods.R#L39) *warning:* **no visible global function definition for ‘assays’**
```r
        assays(object)[["counts"]]
        ^~~~~~
```
[R/counts-methods.R:58:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/counts-methods.R#L58) *warning:* **no visible global function definition for ‘assays’**
```r
        assays(object)[["counts"]] <- value
        ^~~~~~
```
[R/counts-methods.R:58:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/counts-methods.R#L58) *warning:* **no visible global function definition for ‘assays<-’**
```r
        assays(object)[["counts"]] <- value
        ^~~~~~
```
[R/detectLanes.R:13:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectLanes.R#L13) *style:* **Variable or function name should be snake_case.**
```r
detectLanes <- function(
^~~~~~~~~~~
```
[R/detectLanes.R:17:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectLanes.R#L17) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(object)
    ^~~~~~~~~~~~~~~~~~~
```
[R/detectLanes.R:18:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectLanes.R#L18) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(lanePattern)
    ^~~~~~~~~~~~~~~~~~
```
[R/detectLanes.R:18:24:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectLanes.R#L18) *warning:* **no visible binding for global variable ‘lanePattern’**
```r
    assert_is_a_string(lanePattern)
                       ^~~~~~~~~~~
```
[R/detectLanes.R:21:20:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectLanes.R#L21) *warning:* **no visible global function definition for ‘str_match’**
```r
        as.integer(str_match(object, pattern)[, 2L])
                   ^~~~~~~~~
```
[R/detectOrganism.R:51:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectOrganism.R#L51) *style:* **Variable or function name should be snake_case.**
```r
detectOrganism <- function(object) {
^~~~~~~~~~~~~~
```
[R/detectOrganism.R:52:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectOrganism.R#L52) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(object)
    ^~~~~~~~~~~~~~~~~~~
```
[R/detectOrganism.R:60:14:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectOrganism.R#L60) *warning:* **no visible global function definition for ‘.detectOrganism.string’**
```r
        x <- .detectOrganism.string(object[[i]])
             ^~~~~~~~~~~~~~~~~~~~~~
```
[R/detectOrganism.R:74:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectOrganism.R#L74) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(object)
        ^~~~~~~~~~~~~~~~~~
```
[R/detectOrganism.R:82:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/detectOrganism.R#L82) *warning:* **no visible global function definition for ‘assert_is_tbl_df’**
```r
        assert_is_tbl_df(data)
        ^~~~~~~~~~~~~~~~
```
[R/geometricMean-methods.R:50:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/geometricMean-methods.R#L50) *style:* **Variable or function name should be snake_case.**
```r
        removeNA = TRUE,
        ^~~~~~~~
```
[R/geometricMean-methods.R:51:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/geometricMean-methods.R#L51) *style:* **Variable or function name should be snake_case.**
```r
        zeroPropagate = FALSE
        ^~~~~~~~~~~~~
```
[R/geometricMean-methods.R:53:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/geometricMean-methods.R#L53) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(removeNA)
        ^~~~~~~~~~~~~~~~
```
[R/geometricMean-methods.R:54:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/geometricMean-methods.R#L54) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(zeroPropagate)
        ^~~~~~~~~~~~~~~~
```
[R/geometricMean-methods.R:113:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/geometricMean-methods.R#L113) *style:* **Variable or function name should be snake_case.**
```r
geometricMean.sparseMatrix <- geometricMean.matrix
^~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/logRatio-methods.R:34:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/logRatio-methods.R#L34) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(base)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/logRatio-methods.R:36:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/logRatio-methods.R#L36) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
        assert_all_are_positive(base)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/logRatio-methods.R:57:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/logRatio-methods.R#L57) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(base)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/logRatio-methods.R:59:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/logRatio-methods.R#L59) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
        assert_all_are_positive(base)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/makeSingleCellExperiment.R:25:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L25) *style:* **Variable or function name should be snake_case.**
```r
makeSingleCellExperiment <- function(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/makeSingleCellExperiment.R:27:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L27) *style:* **Variable or function name should be snake_case.**
```r
    rowRanges,
    ^~~~~~~~~
```
[R/makeSingleCellExperiment.R:28:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L28) *style:* **Variable or function name should be snake_case.**
```r
    colData,
    ^~~~~~~
```
[R/makeSingleCellExperiment.R:30:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L30) *style:* **Variable or function name should be snake_case.**
```r
    transgeneNames = NULL,
    ^~~~~~~~~~~~~~
```
[R/makeSingleCellExperiment.R:31:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L31) *style:* **Variable or function name should be snake_case.**
```r
    spikeNames = NULL
    ^~~~~~~~~~
```
[R/makeSingleCellExperiment.R:56:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSingleCellExperiment.R#L56) *warning:* **no visible global function definition for ‘isSpike<-’**
```r
            isSpike(sce, spikeNames[[i]]) <- spikeNames[[i]]
            ^~~~~~~
```
[R/makeSummarizedExperiment.R:104:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L104) *style:* **Variable or function name should be snake_case.**
```r
makeSummarizedExperiment <- function(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:106:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L106) *style:* **Variable or function name should be snake_case.**
```r
    rowRanges = NULL,  # recommended
    ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:107:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L107) *style:* **Variable or function name should be snake_case.**
```r
    rowData = NULL,    # not recommended
    ^~~~~~~
```
[R/makeSummarizedExperiment.R:108:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L108) *style:* **Variable or function name should be snake_case.**
```r
    colData = NULL,
    ^~~~~~~
```
[R/makeSummarizedExperiment.R:110:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L110) *style:* **Variable or function name should be snake_case.**
```r
    transgeneNames = NULL,
    ^~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:111:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L111) *style:* **Variable or function name should be snake_case.**
```r
    spikeNames = NULL
    ^~~~~~~~~~
```
[R/makeSummarizedExperiment.R:118:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L118) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(rowRanges, classes = c("GRanges", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:119:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L119) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(rowData, classes = c("DataFrame", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:122:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L122) *warning:* **no visible global function definition for ‘assert_is_null’**
```r
        assert_is_null(rowData)
        ^~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:124:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L124) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(colData, classes = c("DataFrame", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:125:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L125) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(metadata, classes = c("list", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:126:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L126) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(transgeneNames, classes = c("character", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:127:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L127) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(spikeNames, classes = c("character", "NULL"))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:136:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L136) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
    assert_are_identical(names(assays)[[1L]], "counts")
    ^~~~~~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:141:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L141) *warning:* **no visible global function definition for ‘assertHasValidDimnames’**
```r
    assertHasValidDimnames(assay)
    ^~~~~~~~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:148:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L148) *style:* **Variable or function name should be snake_case.**
```r
    mcolsNames <- NULL
    ^~~~~~~~~~
```
[R/makeSummarizedExperiment.R:155:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L155) *warning:* **no visible global function definition for ‘assert_are_intersecting_sets’**
```r
        assert_are_intersecting_sets(rownames(assay), names(rowRanges))
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:156:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L156) *style:* **Variable or function name should be snake_case.**
```r
        mcolsNames <- names(mcols(rowRanges))
        ^~~~~~~~~~
```
[R/makeSummarizedExperiment.R:156:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L156) *warning:* **no visible global function definition for ‘mcols’, Did you mean 'acos'?**
```r
        mcolsNames <- names(mcols(rowRanges))
        ^~~~~
```
[R/makeSummarizedExperiment.R:160:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L160) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
            assert_is_subset(transgeneNames, setdiff)
            ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:161:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L161) *style:* **Variable or function name should be snake_case.**
```r
            transgeneRanges <- emptyRanges(
            ^~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:166:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L166) *style:* **Variable or function name should be snake_case.**
```r
            rowRanges <- suppressWarnings(c(transgeneRanges, rowRanges))
            ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:171:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L171) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
            assert_is_subset(spikeNames, setdiff)
            ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:172:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L172) *style:* **Variable or function name should be snake_case.**
```r
            spikeRanges <- emptyRanges(
            ^~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:177:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L177) *style:* **Variable or function name should be snake_case.**
```r
            rowRanges <- suppressWarnings(c(spikeRanges, rowRanges))
            ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:181:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L181) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(rownames(assay), rownames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:182:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L182) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData[rownames(assay), , drop = FALSE]
        ^~~~~~~
```
[R/makeSummarizedExperiment.R:185:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L185) *style:* **Variable or function name should be snake_case.**
```r
        rowRanges <- emptyRanges(names = rownames(assay))
        ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:185:22:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L185) *warning:* **no visible global function definition for ‘emptyRanges’**
```r
        rowRanges <- emptyRanges(names = rownames(assay))
                     ^~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:194:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L194) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(is(data, "DataFrame"))
    ^~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:213:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L213) *warning:* **no visible global function definition for ‘assert_has_names’**
```r
        assert_has_names(rowRanges)
        ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:214:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L214) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(rownames(assay), names(rowRanges))
        ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:215:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L215) *style:* **Variable or function name should be snake_case.**
```r
        rowRanges <- rowRanges[rownames(assay)]
        ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:217:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L217) *warning:* **no visible global function definition for ‘assertHasRownames’**
```r
        assertHasRownames(rowData)
        ^~~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:218:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L218) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(rownames(assay), rownames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:219:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L219) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData[rownames(assay), , drop = FALSE]
        ^~~~~~~
```
[R/makeSummarizedExperiment.R:224:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L224) *style:* **Variable or function name should be snake_case.**
```r
        colData <- DataFrame(row.names = colnames(assay))
        ^~~~~~~
```
[R/makeSummarizedExperiment.R:224:20:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L224) *warning:* **no visible global function definition for ‘DataFrame’**
```r
        colData <- DataFrame(row.names = colnames(assay))
                   ^~~~~~~~~
```
[R/makeSummarizedExperiment.R:226:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L226) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
    assert_is_subset(colnames(assay), rownames(colData))
    ^~~~~~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:227:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L227) *style:* **Variable or function name should be snake_case.**
```r
    colData <- colData[colnames(assay), , drop = FALSE]
    ^~~~~~~
```
[R/makeSummarizedExperiment.R:232:25:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L232) *warning:* **no visible global function definition for ‘realpath’**
```r
    metadata[["wd"]] <- realpath(".")
                        ^~~~~~~~
```
[R/makeSummarizedExperiment.R:233:34:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L233) *warning:* **no visible global function definition for ‘session_info’, Did you mean 'sessionInfo'?**
```r
    metadata[["sessionInfo"]] <- session_info(include_base = TRUE)
                                 ^~~~~~~~~~~~
```
[R/makeSummarizedExperiment.R:247:26:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/makeSummarizedExperiment.R#L247) *warning:* **no visible binding for global variable ‘SummarizedExperiment’**
```r
    se <- do.call(what = SummarizedExperiment, args = args)
                         ^~~~~~~~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:24:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L24) *style:* **Variable or function name should be snake_case.**
```r
mapCellsToSamples <- function(cells, samples) {
^~~~~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:25:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L25) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(cells)
    ^~~~~~~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:26:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L26) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(cells)
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:27:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L27) *warning:* **no visible global function definition for ‘assert_is_any_of’**
```r
    assert_is_any_of(samples, c("character", "factor"))
    ^~~~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:39:41:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L39) *warning:* **no visible binding for global variable ‘barcodePattern’**
```r
        pattern <- paste0("^(", sample, barcodePattern)
                                        ^~~~~~~~~~~~~~
```
[R/mapCellsToSamples.R:57:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapCellsToSamples.R#L57) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
    assert_are_identical(length(cells), length(cell2sample))
    ^~~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:69:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L69) *style:* **Variable or function name should be snake_case.**
```r
.mapGenes <- function(object, genes, strict = TRUE) {
^~~~~~~~~
```
[R/mapGenes-methods.R:70:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L70) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "Gene2Symbol")
    ^~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:72:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L72) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(genes)
    ^~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:73:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L73) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
    assert_is_non_empty(genes)
    ^~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:74:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L74) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(strict)
    ^~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:80:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L80) *warning:* **no visible global function definition for ‘assertAllAreUniqueGeneNames’**
```r
        assertAllAreUniqueGeneNames(object, genes)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:109:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L109) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
    assert_is_non_empty(mapped)
    ^~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:150:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L150) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(g2s), rownames(object))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:209:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L209) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(g2s), rownames(object))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/mapGenes-methods.R:268:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/mapGenes-methods.R#L268) *warning:* **no visible global function definition for ‘assert_are_identical’**
```r
        assert_are_identical(rownames(g2s), rownames(object))
        ^~~~~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:18:1:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L18) *style:* **Variable or function name should be snake_case.**
```r
matchInterestingGroups <- function(object, interestingGroups = NULL) {
^~~~~~~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:18:44:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L18) *style:* **Variable or function name should be snake_case.**
```r
matchInterestingGroups <- function(object, interestingGroups = NULL) {
                                           ^~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:20:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L20) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- interestingGroups(object, check = FALSE)
        ^~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:25:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L25) *style:* **Variable or function name should be snake_case.**
```r
            interestingGroups <- "sampleName"
            ^~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:28:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L28) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:30:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L30) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(interestingGroups)
    ^~~~~~~~~~~~~~~~~~~
```
[R/matchInterestingGroups.R:31:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/matchInterestingGroups.R#L31) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
    assert_is_non_empty(interestingGroups)
    ^~~~~~~~~~~~~~~~~~~
```
[R/meltCounts-methods.R:32:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L32) *style:* **Variable or function name should be snake_case.**
```r
        nonzeroGenes = FALSE,
        ^~~~~~~~~~~~
```
[R/meltCounts-methods.R:36:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L36) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/meltCounts-methods.R:37:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L37) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(nonzeroGenes)
        ^~~~~~~~~~~~~~~~
```
[R/meltCounts-methods.R:41:19:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L41) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        counts <- assays(object)[[assay]]
                  ^~~~~~
```
[R/meltCounts-methods.R:42:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L42) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
        assert_is_non_empty(counts)
        ^~~~~~~~~~~~~~~~~~~
```
[R/meltCounts-methods.R:61:13:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L61) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
            assert_is_function(fun)
            ^~~~~~~~~~~~~~~~~~
```
[R/meltCounts-methods.R:66:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/meltCounts-methods.R#L66) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/metrics-methods.R:81:17:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L81) *warning:* **no visible global function definition for ‘colData’**
```r
        data <- colData(object)
                ^~~~~~~
```
[R/metrics-methods.R:127:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L127) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
        assert_is_function(FUN)
        ^~~~~~~~~~~~~~~~~~
```
[R/metrics-methods.R:129:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L129) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
        assert_is_all_of(metrics, "grouped_df")
        ^~~~~~~~~~~~~~~~
```
[R/metrics-methods.R:139:21:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L139) *warning:* **no visible global function definition for ‘select’**
```r
            data <- select(metrics, matches(pattern))
                    ^~~~~~
```
[R/metrics-methods.R:139:37:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L139) *warning:* **no visible global function definition for ‘matches’, Did you mean 'match'?**
```r
            data <- select(metrics, matches(pattern))
                                    ^~~~~~~
```
[R/metrics-methods.R:142:21:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L142) *warning:* **no visible global function definition for ‘select_if’**
```r
            data <- select_if(metrics, is.numeric)
                    ^~~~~~~~~
```
[R/metrics-methods.R:144:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L144) *warning:* **no visible global function definition for ‘assert_is_non_empty’**
```r
        assert_is_non_empty(data)
        ^~~~~~~~~~~~~~~~~~~
```
[R/metrics-methods.R:145:9:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/metrics-methods.R#L145) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/microplate.R:31:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L31) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
    assertIsAnImplicitInteger(plates)
    ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microplate.R:33:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L33) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
    assert_all_are_positive(plates)
    ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/microplate.R:35:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L35) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
    assertIsAnImplicitInteger(wells)
    ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microplate.R:37:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L37) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
    assert_all_are_positive(wells)
    ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/microplate.R:38:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L38) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
    assert_is_subset(wells, c(96L, 384L))
    ^~~~~~~~~~~~~~~~
```
[R/microplate.R:40:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L40) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
    assertIsAnImplicitInteger(controls)
    ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microplate.R:42:5:](https://github.com/steinbaugh/basejump.experiment/blob/5a38c9d7ac37df0f32dd6b168e13ecafa5acdd5e/R/microplate.R#L42) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
    assert_all_are_non_negative(controls)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```


With this change I see link time errors when cross compiling to aarch64:
```
undefined reference to `arm_has_neon'
```


Substituido


Please release a new version for this fix. I cannot use this library on Django 2.1


Created multidev environment [cris#ci-50](https://dashboard.pantheon.io/sites/47f9bb31-f356-464f-aa57-03ca806906e2#ci-50).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-50-cris.pantheonsite.io/)


## Global

| Changed         |   Status |
|:----------------|---------:|
| `coverage`      |     0.01 |
| `nodes_count`   |  3383    |
| `texts_passing` |    47    |
| `texts_total`   |    82    |

## Words

| Changed   |   Status |
|:----------|---------:|
| `eng`     |    +1595 |
| `grc`     |  +222073 |

## Units

| Changed                                                 | Status   |
|:--------------------------------------------------------|:---------|
| `./data/tlg0014/tlg001/tlg0014.tlg001.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg001/tlg0014.tlg001.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg001/tlg0014.tlg001.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg002/tlg0014.tlg002.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg002/tlg0014.tlg002.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg002/tlg0014.tlg002.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg003/tlg0014.tlg003.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg003/tlg0014.tlg003.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg003/tlg0014.tlg003.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg004/tlg0014.tlg004.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg004/tlg0014.tlg004.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg004/tlg0014.tlg004.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg005/tlg0014.tlg005.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg005/tlg0014.tlg005.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg005/tlg0014.tlg005.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg006/tlg0014.tlg006.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg006/tlg0014.tlg006.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg006/tlg0014.tlg006.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg007/tlg0014.tlg007.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg007/tlg0014.tlg007.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg007/tlg0014.tlg007.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg008/tlg0014.tlg008.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg008/tlg0014.tlg008.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg008/tlg0014.tlg008.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg009/tlg0014.tlg009.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg009/tlg0014.tlg009.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg009/tlg0014.tlg009.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg010/tlg0014.tlg010.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg010/tlg0014.tlg010.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg010/tlg0014.tlg010.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg011/tlg0014.tlg011.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg011/tlg0014.tlg011.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg011/tlg0014.tlg011.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg012/tlg0014.tlg012.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg012/tlg0014.tlg012.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg012/tlg0014.tlg012.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg013/tlg0014.tlg013.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg013/tlg0014.tlg013.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg013/tlg0014.tlg013.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg014/tlg0014.tlg014.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg014/tlg0014.tlg014.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg014/tlg0014.tlg014.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg015/tlg0014.tlg015.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg015/tlg0014.tlg015.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg015/tlg0014.tlg015.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg016/tlg0014.tlg016.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg016/tlg0014.tlg016.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg016/tlg0014.tlg016.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg017/tlg0014.tlg017.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg017/tlg0014.tlg017.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg017/tlg0014.tlg017.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg018/tlg0014.tlg018.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg018/tlg0014.tlg018.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg018/tlg0014.tlg018.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg019/tlg0014.tlg019.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg019/tlg0014.tlg019.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg019/tlg0014.tlg019.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg020/tlg0014.tlg020.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg020/tlg0014.tlg020.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg020/tlg0014.tlg020.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg021/tlg0014.tlg021.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg021/tlg0014.tlg021.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg021/tlg0014.tlg021.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg022/tlg0014.tlg022.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg022/tlg0014.tlg022.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg022/tlg0014.tlg022.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg023/tlg0014.tlg023.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg023/tlg0014.tlg023.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg023/tlg0014.tlg023.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg024/tlg0014.tlg024.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg024/tlg0014.tlg024.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg024/tlg0014.tlg024.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg025/tlg0014.tlg025.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg025/tlg0014.tlg025.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg025/tlg0014.tlg025.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg026/tlg0014.tlg026.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg026/tlg0014.tlg026.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg026/tlg0014.tlg026.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg027/tlg0014.tlg027.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg027/tlg0014.tlg027.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg027/tlg0014.tlg027.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg028/tlg0014.tlg028.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg028/tlg0014.tlg028.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg028/tlg0014.tlg028.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg029/tlg0014.tlg029.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg029/tlg0014.tlg029.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg029/tlg0014.tlg029.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg030/tlg0014.tlg030.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg030/tlg0014.tlg030.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg030/tlg0014.tlg030.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg031/tlg0014.tlg031.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg031/tlg0014.tlg031.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg031/tlg0014.tlg031.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg032/tlg0014.tlg032.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg032/tlg0014.tlg032.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg032/tlg0014.tlg032.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg033/tlg0014.tlg033.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg033/tlg0014.tlg033.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg033/tlg0014.tlg033.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg034/tlg0014.tlg034.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg034/tlg0014.tlg034.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg034/tlg0014.tlg034.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg035/tlg0014.tlg035.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg035/tlg0014.tlg035.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg035/tlg0014.tlg035.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg036/tlg0014.tlg036.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg036/tlg0014.tlg036.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg036/tlg0014.tlg036.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg037/tlg0014.tlg037.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg037/tlg0014.tlg037.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg037/tlg0014.tlg037.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg038/tlg0014.tlg038.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg038/tlg0014.tlg038.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg038/tlg0014.tlg038.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg039/tlg0014.tlg039.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg039/tlg0014.tlg039.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg039/tlg0014.tlg039.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg040/tlg0014.tlg040.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg040/tlg0014.tlg040.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg040/tlg0014.tlg040.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg041/tlg0014.tlg041.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg041/tlg0014.tlg041.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg041/tlg0014.tlg041.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg042/tlg0014.tlg042.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg042/tlg0014.tlg042.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg042/tlg0014.tlg042.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg043/tlg0014.tlg043.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg043/tlg0014.tlg043.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg043/tlg0014.tlg043.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg044/tlg0014.tlg044.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg044/tlg0014.tlg044.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg044/tlg0014.tlg044.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg045/tlg0014.tlg045.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg045/tlg0014.tlg045.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg045/tlg0014.tlg045.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg046/tlg0014.tlg046.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg046/tlg0014.tlg046.perseus-grc1.xml` | Deleted  |
| `./data/tlg0014/tlg046/tlg0014.tlg046.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg047/tlg0014.tlg047.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg047/tlg0014.tlg047.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg048/tlg0014.tlg048.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg048/tlg0014.tlg048.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg049/tlg0014.tlg049.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg049/tlg0014.tlg049.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg050/tlg0014.tlg050.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg050/tlg0014.tlg050.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg051/tlg0014.tlg051.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg051/tlg0014.tlg051.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg052/tlg0014.tlg052.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg052/tlg0014.tlg052.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg053/tlg0014.tlg053.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg053/tlg0014.tlg053.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg054/tlg0014.tlg054.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg054/tlg0014.tlg054.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg055/tlg0014.tlg055.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg055/tlg0014.tlg055.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg056/tlg0014.tlg056.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg056/tlg0014.tlg056.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg057/tlg0014.tlg057.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg057/tlg0014.tlg057.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg058/tlg0014.tlg058.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg058/tlg0014.tlg058.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg059/tlg0014.tlg059.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg059/tlg0014.tlg059.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg060/tlg0014.tlg060.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg060/tlg0014.tlg060.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg061/tlg0014.tlg061.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg061/tlg0014.tlg061.perseus-grc2.xml` | New      |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-eng1.xml` | New      |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-grc1.xml` | New      |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-eng1.xml` | New      |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-eng2.xml` | New      |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-grc1.xml` | New      |
| `./data/tlg0014/tlg001/tlg0014.tlg001.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg001/tlg0014.tlg001.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg002/tlg0014.tlg002.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg002/tlg0014.tlg002.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg003/tlg0014.tlg003.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg003/tlg0014.tlg003.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg004/tlg0014.tlg004.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg004/tlg0014.tlg004.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg005/tlg0014.tlg005.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg005/tlg0014.tlg005.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg006/tlg0014.tlg006.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg006/tlg0014.tlg006.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg007/tlg0014.tlg007.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg007/tlg0014.tlg007.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg008/tlg0014.tlg008.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg008/tlg0014.tlg008.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg009/tlg0014.tlg009.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg009/tlg0014.tlg009.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg010/tlg0014.tlg010.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg010/tlg0014.tlg010.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg011/tlg0014.tlg011.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg011/tlg0014.tlg011.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg012/tlg0014.tlg012.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg012/tlg0014.tlg012.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg013/tlg0014.tlg013.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg013/tlg0014.tlg013.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg014/tlg0014.tlg014.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg014/tlg0014.tlg014.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg015/tlg0014.tlg015.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg015/tlg0014.tlg015.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg016/tlg0014.tlg016.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg016/tlg0014.tlg016.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg017/tlg0014.tlg017.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg017/tlg0014.tlg017.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg018/tlg0014.tlg018.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg018/tlg0014.tlg018.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg019/tlg0014.tlg019.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg019/tlg0014.tlg019.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg020/tlg0014.tlg020.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg020/tlg0014.tlg020.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg021/tlg0014.tlg021.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg021/tlg0014.tlg021.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg022/tlg0014.tlg022.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg022/tlg0014.tlg022.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg023/tlg0014.tlg023.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg023/tlg0014.tlg023.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg024/tlg0014.tlg024.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg024/tlg0014.tlg024.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg025/tlg0014.tlg025.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg025/tlg0014.tlg025.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg026/tlg0014.tlg026.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg026/tlg0014.tlg026.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg027/tlg0014.tlg027.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg027/tlg0014.tlg027.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg028/tlg0014.tlg028.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg028/tlg0014.tlg028.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg029/tlg0014.tlg029.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg029/tlg0014.tlg029.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg030/tlg0014.tlg030.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg030/tlg0014.tlg030.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg031/tlg0014.tlg031.perseus-eng2.xml` | Passing  |
| `./data/tlg0014/tlg031/tlg0014.tlg031.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg032/tlg0014.tlg032.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg032/tlg0014.tlg032.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg033/tlg0014.tlg033.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg033/tlg0014.tlg033.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg034/tlg0014.tlg034.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg034/tlg0014.tlg034.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg035/tlg0014.tlg035.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg035/tlg0014.tlg035.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg036/tlg0014.tlg036.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg036/tlg0014.tlg036.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg037/tlg0014.tlg037.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg037/tlg0014.tlg037.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg038/tlg0014.tlg038.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg038/tlg0014.tlg038.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg039/tlg0014.tlg039.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg039/tlg0014.tlg039.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg040/tlg0014.tlg040.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg040/tlg0014.tlg040.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg041/tlg0014.tlg041.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg041/tlg0014.tlg041.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg042/tlg0014.tlg042.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg042/tlg0014.tlg042.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg043/tlg0014.tlg043.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg043/tlg0014.tlg043.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg044/tlg0014.tlg044.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg044/tlg0014.tlg044.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg045/tlg0014.tlg045.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg045/tlg0014.tlg045.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg046/tlg0014.tlg046.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg046/tlg0014.tlg046.perseus-grc2.xml` | Passing  |
| `./data/tlg0014/tlg047/tlg0014.tlg047.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg047/tlg0014.tlg047.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg048/tlg0014.tlg048.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg048/tlg0014.tlg048.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg049/tlg0014.tlg049.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg049/tlg0014.tlg049.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg050/tlg0014.tlg050.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg050/tlg0014.tlg050.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg051/tlg0014.tlg051.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg051/tlg0014.tlg051.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg052/tlg0014.tlg052.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg052/tlg0014.tlg052.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg053/tlg0014.tlg053.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg053/tlg0014.tlg053.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg054/tlg0014.tlg054.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg054/tlg0014.tlg054.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg055/tlg0014.tlg055.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg055/tlg0014.tlg055.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg056/tlg0014.tlg056.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg056/tlg0014.tlg056.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg057/tlg0014.tlg057.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg057/tlg0014.tlg057.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg058/tlg0014.tlg058.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg058/tlg0014.tlg058.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg059/tlg0014.tlg059.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg059/tlg0014.tlg059.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg060/tlg0014.tlg060.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg060/tlg0014.tlg060.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg061/tlg0014.tlg061.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg061/tlg0014.tlg061.perseus-grc2.xml` | Failing  |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-eng1.xml` | Failing  |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg062/tlg0014.tlg062.perseus-grc1.xml` | Failing  |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-eng1.xml` | Failing  |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-eng2.xml` | Failing  |
| `./data/tlg0014/tlg063/tlg0014.tlg063.perseus-grc1.xml` | Failing  |

*[Hook UI build recap](http://ci.perseids.org/repo/PerseusDL/canonical-greekLit/4583)*


Awesome, will be even better if we could separate the commit message into multi-line!
Ref: https://chris.beams.io/posts/git-commit/


I would keep the `pause` object.


Michael, I have some vague recollections but I think I intentionally omitted the FileRotate log method because it behaved like our original PlainFile rotate and did a full file copy of the logfile when doing the rotate.   However it looks like they must have changed this, as it now uses rename to rotate the logs.  So hopefully not a problem any more.

Anyway, at the time I was working on this, File::Rolling was much faster than the File::Rotate.


Hi dude.


@SubramanianMuthu The refreshing of expired access tokens is automatically handled in Spring Security 5.1 [`WebClient` extension](https://docs.spring.io/spring-security/site/docs/5.1.1.RELEASE/reference/htmlsingle/#servlet-webclient).

Here is a [sample](https://docs.spring.io/spring-security/site/docs/5.1.1.RELEASE/reference/htmlsingle/#oauth2client) with Client and Resource Server in 5.1 and UAA as Authorization Server.

Please go over the reference doc as there is a lot of info there.

[Client](https://docs.spring.io/spring-security/site/docs/5.1.1.RELEASE/reference/htmlsingle/#oauth2client)
[Resource Server](https://docs.spring.io/spring-security/site/docs/5.1.1.RELEASE/reference/htmlsingle/#oauth2resourceserver)

In the future , please post questions to [Stackoverflow](https://stackoverflow.com/questions/tagged/spring-security+or+oauth-2.0)


Ah.


Template elements like `{x}` were treated as template vars, this keeps them in place for OSM to use.


Should this be checked in?


Bagaimana hacknya ni gan


`.cd`
[`.beautify`](:1st_place_medal: )


Thanks for adding in comments for the code in pyTranslate.py.  Can you also please add a comment at the top of the file specifying:

(1) what the program does;
(2) how it is invoked [and anything else someone using it may want to know]; and
(3) [if appropriate] any assumptions it makes in order to execute correctly.


This is easier to read, thx.


Can not see that this change has any effect the content of the "deploy" folder and how they are named.

This is all handled by [kernel-devicetree.bbclass](https://github.com/openembedded/openembedded-core/blob/sumo/meta/classes/kernel-devicetree.bbclass#L59-L112) and [kernel.bbclass|https://github.com/openembedded/openembedded-core/blob/sumo/meta/classes/kernel.bbclass#L668-L703] which simply picks up the naming from variables like `KERNEL_DEVICETREE` and `KERNEL_IMAGETYPE` and other "magic".

Above also provide the packages that I have added in this commit (kernel-image and kernel-devicetree)

It is possible that the behavior has changed between `rocko` and `sumo`.


Ok, the right stuff is still there, we're all good. Opening a separate issue about the /Tools


Bagaimana cara hacknya ni gan


Hi! This is the friendly automated conda-forge-webservice.

I updated the Github team because of this commit.

- @duncanmmacleod was added to this feedstock maintenance team.

You should get push access to this feedstock and CI services.

Feel free to join the community [chat room](https://gitter.im/conda-forge/conda-forge.github.io).

NOTE: Please make sure to not push to the repository directly.
      Use branches in your fork for any changes and send a PR.
      More details [here](https://conda-forge.org/docs/conda-forge_gotchas.html#using-a-fork-vs-a-branch-when-updating-a-recipe)


[`3493e3435ef1e127543f638638c685bfc4b6395a`](:+1: )
`Read.mit`
`.spotify'
`master_expert.factory`


This commit has been mentioned on **Discourse Meta**. There might be relevant details there:

https://meta.discourse.org/t/discourse-hub-app-does-not-work-on-latest-stable-any-more/101084/2


Na ja, dass sie dringend benötigt wird, glaube ich (noch) nicht. In der AVM .config ist die Variable schließlich auch gesetzt, s. [uclibc/configs/avm/config-i686-1.0.14#L242](https://github.com/Freetz/freetz/blob/master/toolchain/make/target/uclibc/configs/avm/config-i686-1.0.14#L242)

Ich versuche mal das Problem nachzustellen und dann zu analysieren.


FYI, these kinds of fixes have implications for flow-runtime. I've been hunting this one and glad to see it fixed. Thanks!  https://github.com/codemix/flow-runtime/issues/216


Grab something to eat after class!


readme.md added


This would entail less autodiff if it were
```
vector spd_cov_exp_quad(vector[] x, real sdgp, real lscale) {
  int NB = dims(x)[1];
  int D = dims(x)[2];
  real constant = square(sdgp) * (sqrt(2 * pi()) * lscale)^D;
  real neg_half_lscale2 = -0.5 * square(lscale);
  vector[NB] out;
  for (m in 1:NB) out[m] = constant * exp(neg_half_lscale2 * dot_self(x[m]));
  return out;
}
```


U have no "readme" file. Whats the point of da code?


IBM Cloud [toolchain](https://console.bluemix.net/devops/toolchains/8839f9f8-ee5d-429f-8749-52267c653952?env_id=ibm%3Ayp%3Aus-south "ws-expose"): [Delivery Pipeline](https://console.bluemix.net/devops/pipelines/5c41e84d-5968-4649-8c7b-52afb41b0a6e?env_id=ibm%3Ayp%3Aus-south "ws-expose-pipeline") deployed [script_net](https://github.com/yeltnar/script_net/releases/tag/deploy-ibm-yp-us-south-andcbrant-gmail.com-dev-20181101-201444 "deploy-ibm-yp-us-south-andcbrant-gmail.com-dev-20181101-201444") to [dev](https://console.bluemix.net/apps/e68f5516-a561-42c7-ac49-af54fea27ed3?env_id=ibm:yp:us-south "ibm:yp:us-south:andcbrant@gmail.com:dev"), including this commit


Hi,
 EstoniaOrtho(Maaamet)  came in as a duplicate of already existing EstoniaOrtho-Maaamet .
Is it ok to just delete the newcomer or is some renaming necessary to ease future syncs?
Also maxzoom 18 is a bit low for that and other Estonian layers except hillshade. Is it a manual fixing in josm index or  is it sufficient to fix only here?


Thanks Jared!


NOOOOOOOOOO!!!!!! GRRRRRR!!!!


[`4b0c78bc3449ee374f7d9746c6aa988d17ebbf7d`](:+1: )
`Wellsfargo.logic`.
`.zelle`
`.wire_transfer`


> Fixed on dev-branch now

Confirmed—my local build is restored.  Thank you so much for the quick response!


doesnt work just a green screen when i play


Created multidev environment [cris#ci-52](https://dashboard.pantheon.io/sites/47f9bb31-f356-464f-aa57-03ca806906e2#ci-52).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-52-cris.pantheonsite.io/)


Name / Anton Zakka Salama
Sec  / 1


Can we somehow revert this sh**???


I'm aware, yes. Does `opts.link_speed_bytes // wanted_connections // 3` have advantages that I am missing?


I'm not sure what you mean. Something like
```
auto comp_name = /* lambda here */;
while(std::find_if(PlaybackDevices.cbegin(), PlaybackDevices.cend(), comp_name) != PlaybackDevices.cend())
{
    ...
```
?


function


[`1c5e014d48e40eadbf106c2701f86e4adc3274c8`](:+1)
`1.exception`


@valib any objections to a release in the next few hours?


Actually what `compute_tf_std_d(order, n)` does is computing
`colSums(X.scaled*X.scaled)` without using any matrix. So I do not need
X.scaled or X. All I need are order and n. As you said before, you expect
no X matrix in the whole algorithm.

On Thu, Nov 1, 2018 at 1:56 PM stephens999 <notifications@github.com> wrote:

> You need to assign the result of this function to something.... And define
> what X is for later use.
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/stephenslab/susieR/commit/70cbd0240c8ec8dd567167a3e15d407b000cb0a7#commitcomment-31139273>,
> or mute the thread
> <https://github.com/notifications/unsubscribe-auth/AYMf73sV6DU8rHBYCOGlXnEVGAVtIeqcks5uq0PQgaJpZM4YITPK>
> .
>


[`9027b73bcaa2a218894fac52e50906119f8274f7`](:100: )