[R/pheatmap-internal.R:1:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L1) *style:* **Variable or function name should be snake_case.**
```r
.emptyPheatmapAnnotations <- list(
^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:10:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L10) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapAnnotations <- function(
^~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:13:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L13) *style:* **Variable or function name should be snake_case.**
```r
    legendColor
    ^~~~~~~~~~~
```
[R/pheatmap-internal.R:16:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L16) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
    assert_is_character(blacklist)
    ^~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:17:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L17) *warning:* **no visible global function definition for ‘assertIsHexColorFunctionOrNULL’**
```r
    assertIsHexColorFunctionOrNULL(legendColor)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:20:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L20) *warning:* **no visible global function definition for ‘colData’**
```r
    data <- colData(object)
            ^~~~~~~
```
[R/pheatmap-internal.R:21:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L21) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:29:16:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L29) *warning:* **no visible binding for global variable ‘.emptyPheatmapAnnotations’**
```r
        return(.emptyPheatmapAnnotations)
               ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:32:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L32) *warning:* **no visible global function definition for ‘assertHasRownames’**
```r
    assertHasRownames(data)
    ^~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:51:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L51) *style:* **Variable or function name should be snake_case.**
```r
    hasLevels <- vapply(
    ^~~~~~~~~
```
[R/pheatmap-internal.R:61:16:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L61) *warning:* **no visible binding for global variable ‘.emptyPheatmapAnnotations’**
```r
        return(.emptyPheatmapAnnotations)  # nocov
               ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:74:17:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L74) *warning:* **no visible global function definition for ‘assert_is_factor’**
```r
                assert_is_factor(x)
                ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:96:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L96) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapArgs <- function(args) {
^~~~~~~~~~~~~
```
[R/pheatmap-internal.R:97:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L97) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
    assert_is_list(args)
    ^~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:98:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L98) *warning:* **no visible global function definition for ‘assert_has_names’**
```r
    assert_has_names(args)
    ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:100:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L100) *style:* **Variable or function name should be snake_case.**
```r
    invalidNames <- grep("[._]", names(args), value = TRUE)
    ^~~~~~~~~~~~
```
[R/pheatmap-internal.R:107:20:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L107) *warning:* **no visible global function definition for ‘snake’, Did you mean 'save'?**
```r
    names(args) <- snake(names(args))
                   ^~~~~
```
[R/pheatmap-internal.R:108:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L108) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
    assert_is_subset(names(args), formalArgs(pheatmap))
    ^~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:108:46:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L108) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
    assert_is_subset(names(args), formalArgs(pheatmap))
                                             ^~~~~~~~
```
[R/pheatmap-internal.R:109:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L109) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(names(args))
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:116:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L116) *style:* **Variable or function name should be snake_case.**
```r
.pheatmapColorPalette <- function(color = NULL, n = 256L) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:120:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L120) *warning:* **no visible global function definition for ‘assert_all_are_hex_colors’**
```r
        assert_all_are_hex_colors(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:125:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L125) *warning:* **no visible global function definition for ‘assertIsHexColorFunctionOrNULL’**
```r
        assertIsHexColorFunctionOrNULL(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/pheatmap-internal.R:129:30:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/pheatmap-internal.R#L129) *warning:* **no visible global function definition for ‘brewer.pal’**
```r
        colorRampPalette(rev(brewer.pal(n = 7L, name = "RdYlBu")))(n)
                             ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:39:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L39) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L41) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts"
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:44:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L44) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:45:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L45) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:46:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L46) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:50:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L50) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:51:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L51) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(trans)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:52:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L52) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:54:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L54) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData(object)
        ^~~~~~~
```
[R/plotCountsPerBiotype-methods.R:59:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L59) *style:* **Variable or function name should be snake_case.**
```r
            biotypeCol <- "transcriptBiotype"
            ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:61:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L61) *style:* **Variable or function name should be snake_case.**
```r
            biotypeCol <- "geneBiotype"
            ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:63:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L63) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(biotypeCol, colnames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:79:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L79) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:104:21:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘rename’, Did you mean 'unname'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                    ^~~~~~
```
[R/plotCountsPerBiotype-methods.R:104:36:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:104:36:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:104:52:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L104) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                                   ^~
```
[R/plotCountsPerBiotype-methods.R:180:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L180) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:182:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L182) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts"
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:185:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L185) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:186:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L186) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:190:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L190) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:191:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L191) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(trans)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:192:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L192) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:194:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L194) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData(object)
        ^~~~~~~
```
[R/plotCountsPerBiotype-methods.R:197:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L197) *style:* **Variable or function name should be snake_case.**
```r
        biotypeCol <- "broadClass"
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:198:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L198) *warning:* **no visible global function definition for ‘assert_is_subset’**
```r
        assert_is_subset(biotypeCol, colnames(rowData))
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:212:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L212) *style:* **Variable or function name should be snake_case.**
```r
        sampleData <- sampleData(object) %>%
        ^~~~~~~~~~
```
[R/plotCountsPerBiotype-methods.R:236:21:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘rename’, Did you mean 'unname'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                    ^~~~~~
```
[R/plotCountsPerBiotype-methods.R:236:36:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:236:36:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                   ^~~
```
[R/plotCountsPerBiotype-methods.R:236:52:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerBiotype-methods.R#L236) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
            data <- rename(data, !!sym("sampleID") := !!sym("colname"))
                                                   ^~
```
[R/plotCountsPerGene-methods.R:31:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L31) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:37:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L37) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts",
        ^~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L41) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:42:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L42) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:46:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L46) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:49:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L49) *warning:* **no visible global function definition for ‘assertIsFillScaleDiscreteOrNULL’**
```r
        assertIsFillScaleDiscreteOrNULL(fill)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:50:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L50) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(flip)
        ^~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:51:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L51) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(countsAxisLabel)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:52:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L52) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:70:14:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L70) *warning:* **no visible global function definition for ‘ggplot’, Did you mean 'biplot'?**
```r
        p <- ggplot(data = data)
             ^~~~~~
```
[R/plotCountsPerGene-methods.R:124:22:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L124) *warning:* **no visible global function definition for ‘coord_flip’**
```r
            p <- p + coord_flip()
                     ^~~~~~~~~~
```
[R/plotCountsPerGene-methods.R:128:22:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotCountsPerGene-methods.R#L128) *warning:* **no visible global function definition for ‘guides’**
```r
            p <- p + guides(color = FALSE, fill = FALSE)
                     ^~~~~~
```
[R/plotGenderMarkers-methods.R:22:21:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L22) *warning:* **no visible binding for global variable ‘object’, Did you mean 'objects'?**
```r
        validObject(object)
                    ^~~~~~
```
[R/plotGenderMarkers-methods.R:25:30:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L25) *warning:* **no visible binding for global variable ‘object’, Did you mean 'objects'?**
```r
        organism <- organism(object)
                             ^~~~~~
```
[R/plotGenderMarkers-methods.R:33:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L33) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(markers)
        ^~~~~~~~~~~~~~
```
[R/plotGenderMarkers-methods.R:36:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L36) *style:* **Variable or function name should be snake_case.**
```r
        supportedOrganisms <- names(markers) %>%
        ^~~~~~~~~~~~~~~~~~
```
[R/plotGenderMarkers-methods.R:47:29:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L47) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
        markers <- markers[[camel(organism)]]
                            ^~~~~
```
[R/plotGenderMarkers-methods.R:48:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenderMarkers-methods.R#L48) *warning:* **no visible global function definition for ‘assert_is_tbl_df’**
```r
        assert_is_tbl_df(markers)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:41:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L41) *style:* **Variable or function name should be snake_case.**
```r
.plotGeneFacet <- function(
^~~~~~~~~~~~~~
```
[R/plotGene-methods.R:43:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L43) *style:* **Variable or function name should be snake_case.**
```r
    countsAxisLabel = "counts",
    ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:44:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L44) *style:* **Variable or function name should be snake_case.**
```r
    medianLine = TRUE,
    ^~~~~~~~~~
```
[R/plotGene-methods.R:48:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L48) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "SummarizedExperiment")
    ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:49:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L49) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:52:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L52) *warning:* **no visible global function definition for ‘meltCounts’**
```r
    data <- meltCounts(object)
            ^~~~~~~~~~
```
[R/plotGene-methods.R:74:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L74) *warning:* **no visible binding for global variable ‘.geneMedianLine’**
```r
        p <- p + .geneMedianLine
                 ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:82:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L82) *warning:* **no visible global function definition for ‘guides’**
```r
        p <- p + guides(color = FALSE)
                 ^~~~~~
```
[R/plotGene-methods.R:90:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L90) *style:* **Variable or function name should be snake_case.**
```r
.plotGeneWide <- function(
^~~~~~~~~~~~~
```
[R/plotGene-methods.R:92:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L92) *style:* **Variable or function name should be snake_case.**
```r
    countsAxisLabel = "counts",
    ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:93:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L93) *style:* **Variable or function name should be snake_case.**
```r
    medianLine = TRUE,
    ^~~~~~~~~~
```
[R/plotGene-methods.R:97:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L97) *warning:* **no visible global function definition for ‘assert_is_all_of’**
```r
    assert_is_all_of(object, "SummarizedExperiment")
    ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:98:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L98) *style:* **Variable or function name should be snake_case.**
```r
    interestingGroups <- interestingGroups(object)
    ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:101:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L101) *warning:* **no visible global function definition for ‘meltCounts’**
```r
    data <- meltCounts(object)
            ^~~~~~~~~~
```
[R/plotGene-methods.R:122:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L122) *warning:* **no visible binding for global variable ‘.geneMedianLine’**
```r
        p <- p + .geneMedianLine
                 ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:140:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L140) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:141:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L141) *style:* **Variable or function name should be snake_case.**
```r
        countsAxisLabel = "counts",
        ^~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:142:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L142) *style:* **Variable or function name should be snake_case.**
```r
        medianLine = TRUE,
        ^~~~~~~~~~
```
[R/plotGene-methods.R:149:19:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L149) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:150:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L150) *warning:* **no visible global function definition for ‘assert_is_character’**
```r
        assert_is_character(genes)
        ^~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:152:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L152) *warning:* **no visible global function definition for ‘assert_all_are_in_closed_range’**
```r
        assert_all_are_in_closed_range(length(genes), lower = 1L, upper = 20L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:153:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L153) *warning:* **no visible global function definition for ‘mapGenesToRownames’**
```r
        genes <- mapGenesToRownames(object, genes = genes, strict = FALSE)
                 ^~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:154:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L154) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:155:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L155) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:159:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L159) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:160:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L160) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(medianLine)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:161:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L161) *warning:* **no visible global function definition for ‘assertIsColorScaleDiscreteOrNULL’**
```r
        assertIsColorScaleDiscreteOrNULL(color)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:162:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L162) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(legend)
        ^~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:166:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L166) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        assay <- assays(object)[[assay]]
                 ^~~~~~
```
[R/plotGene-methods.R:167:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L167) *warning:* **no visible global function definition for ‘assays<-’**
```r
        assays(object) <- list(assay = assay)
        ^~~~~~
```
[R/plotGene-methods.R:172:19:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L172) *warning:* **no visible global function definition for ‘convertGenesToSymbols’**
```r
        object <- convertGenesToSymbols(object)
                  ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotGene-methods.R:176:21:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L176) *warning:* **no visible binding for global variable ‘.plotGeneFacet’**
```r
            what <- .plotGeneFacet
                    ^~~~~~~~~~~~~~
```
[R/plotGene-methods.R:178:21:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGene-methods.R#L178) *warning:* **no visible binding for global variable ‘.plotGeneWide’**
```r
            what <- .plotGeneWide
                    ^~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:24:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L24) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:26:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L26) *style:* **Variable or function name should be snake_case.**
```r
        minCounts = 1L,
        ^~~~~~~~~
```
[R/plotGenesDetected-methods.R:32:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L32) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:33:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L33) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:37:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L37) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
        interestingGroups(object) <- interestingGroups
        ^~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:38:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L38) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(limit)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:39:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L39) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(limit)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:40:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L40) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(minCounts)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:41:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L41) *warning:* **no visible global function definition for ‘assert_all_are_in_range’**
```r
        assert_all_are_in_range(minCounts, lower = 1L, upper = Inf)
        ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:42:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L42) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(minCounts)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:43:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L43) *warning:* **no visible global function definition for ‘assertIsFillScaleDiscreteOrNULL’**
```r
        assertIsFillScaleDiscreteOrNULL(fill)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:44:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L44) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(flip)
        ^~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:45:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L45) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:47:19:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L47) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        counts <- assays(object)[[assay]]
                  ^~~~~~
```
[R/plotGenesDetected-methods.R:48:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L48) *style:* **Variable or function name should be snake_case.**
```r
        geneCount <- colSums(counts >= minCounts)
        ^~~~~~~~~
```
[R/plotGenesDetected-methods.R:73:22:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L73) *warning:* **no visible global function definition for ‘basejump_geom_abline’**
```r
            p <- p + basejump_geom_abline(yintercept = limit)
                     ^~~~~~~~~~~~~~~~~~~~
```
[R/plotGenesDetected-methods.R:81:22:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L81) *warning:* **no visible global function definition for ‘coord_flip’**
```r
            p <- p + coord_flip()
                     ^~~~~~~~~~
```
[R/plotGenesDetected-methods.R:85:22:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotGenesDetected-methods.R#L85) *warning:* **no visible global function definition for ‘guides’**
```r
            p <- p + guides(fill = FALSE)
                     ^~~~~~
```
[R/plotHeatmap-methods.R:111:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L111) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:113:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L113) *style:* **Variable or function name should be snake_case.**
```r
        clusterRows = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:114:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L114) *style:* **Variable or function name should be snake_case.**
```r
        clusterCols = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:115:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L115) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = FALSE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:116:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L116) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:117:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L117) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:118:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L118) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:120:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L120) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:121:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L121) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:126:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L126) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:127:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L127) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:128:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L128) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:129:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L129) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:134:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L134) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:137:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L137) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterCols)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:138:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L138) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterRows)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:139:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L139) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showColnames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:140:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L140) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showRownames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:141:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L141) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightRow)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:142:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L142) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightCol)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:143:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L143) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(treeheightRow, treeheightCol)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:144:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L144) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:146:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L146) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:148:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L148) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(title)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:154:19:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L154) *warning:* **no visible global function definition for ‘convertGenesToSymbols’**
```r
        object <- convertGenesToSymbols(object)
                  ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:157:26:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L157) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        mat <- as.matrix(assays(object)[[assay]])
                         ^~~~~~
```
[R/plotHeatmap-methods.R:170:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L170) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(x)
        ^~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:175:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L175) *style:* **Variable or function name should be snake_case.**
```r
        annotationCol <- x[["annotationCol"]]
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:176:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L176) *style:* **Variable or function name should be snake_case.**
```r
        annotationColors <- x[["annotationColors"]]
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:179:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L179) *warning:* **no visible global function definition for ‘.pheatmapColorPalette’**
```r
        color <- .pheatmapColorPalette(color)
                 ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:182:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L182) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- tryCatch(
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:213:17:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L213) *warning:* **no visible global function definition for ‘.pheatmapArgs’**
```r
        args <- .pheatmapArgs(args)
                ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:214:24:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L214) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
        do.call(what = pheatmap, args = args)
                       ^~~~~~~~
```
[R/plotHeatmap-methods.R:223:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L223) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:225:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L225) *style:* **Variable or function name should be snake_case.**
```r
        clusteringMethod = "ward.D2",
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:226:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L226) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:227:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L227) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:228:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L228) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:229:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L229) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:231:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L231) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:232:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L232) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:237:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L237) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:238:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L238) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:239:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L239) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:240:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L240) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:245:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L245) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:248:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L248) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(clusteringMethod)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:249:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L249) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showColnames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:250:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L250) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(showRownames)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:251:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L251) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightRow)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:252:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L252) *warning:* **no visible global function definition for ‘assert_is_a_number’**
```r
        assert_is_a_number(treeheightCol)
        ^~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:253:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L253) *warning:* **no visible global function definition for ‘assert_all_are_non_negative’**
```r
        assert_all_are_non_negative(treeheightRow, treeheightCol)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:254:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L254) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:256:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L256) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:265:26:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L265) *warning:* **no visible global function definition for ‘assays’, Did you mean 'assay'?**
```r
        mat <- as.matrix(assays(object)[[assay]])
                         ^~~~~~
```
[R/plotHeatmap-methods.R:273:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L273) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
        assert_is_list(x)
        ^~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:278:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L278) *style:* **Variable or function name should be snake_case.**
```r
        annotationCol <- x[["annotationCol"]]
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:279:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L279) *style:* **Variable or function name should be snake_case.**
```r
        annotationColors <- x[["annotationColors"]]
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:282:18:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L282) *warning:* **no visible global function definition for ‘.pheatmapColorPalette’**
```r
        color <- .pheatmapColorPalette(color)
                 ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:285:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L285) *style:* **Variable or function name should be snake_case.**
```r
        sampleNames <- tryCatch(
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:317:17:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L317) *warning:* **no visible global function definition for ‘.pheatmapArgs’**
```r
        args <- .pheatmapArgs(args)
                ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:322:24:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L322) *warning:* **no visible binding for global variable ‘pheatmap’, Did you mean 'heatmap'?**
```r
        do.call(what = pheatmap, args = args)
                       ^~~~~~~~
```
[R/plotHeatmap-methods.R:327:1:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L327) *style:* **Variable or function name should be snake_case.**
```r
.quantileBreaks <- function(object, n = 10L) {
^~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:328:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L328) *warning:* **no visible global function definition for ‘assert_is_matrix’**
```r
    assert_is_matrix(object)
    ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:329:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L329) *warning:* **no visible global function definition for ‘assert_is_an_integer’**
```r
    assert_is_an_integer(n)
    ^~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:330:5:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L330) *warning:* **no visible global function definition for ‘assert_all_are_positive’**
```r
    assert_all_are_positive(n)
    ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:341:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L341) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups = NULL,
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:343:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L343) *style:* **Variable or function name should be snake_case.**
```r
        clusterRows = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:344:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L344) *style:* **Variable or function name should be snake_case.**
```r
        clusterCols = TRUE,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:345:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L345) *style:* **Variable or function name should be snake_case.**
```r
        showRownames = FALSE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:346:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L346) *style:* **Variable or function name should be snake_case.**
```r
        showColnames = TRUE,
        ^~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:347:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L347) *style:* **Variable or function name should be snake_case.**
```r
        treeheightRow = 0L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:348:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L348) *style:* **Variable or function name should be snake_case.**
```r
        treeheightCol = 50L,
        ^~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:350:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L350) *style:* **Variable or function name should be snake_case.**
```r
        legendColor = viridis::viridis,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:352:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L352) *style:* **Variable or function name should be snake_case.**
```r
        borderColor = NULL,
        ^~~~~~~~~~~
```
[R/plotHeatmap-methods.R:357:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L357) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(nrow(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:358:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L358) *warning:* **no visible global function definition for ‘assert_all_are_greater_than’**
```r
        assert_all_are_greater_than(ncol(object), 1L)
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:359:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L359) *warning:* **no visible global function definition for ‘assert_is_scalar’**
```r
        assert_is_scalar(assay)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:360:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L360) *style:* **Variable or function name should be snake_case.**
```r
        interestingGroups <- matchInterestingGroups(
        ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:365:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L365) *warning:* **no visible global function definition for ‘interestingGroups<-’, Did you mean 'interestingGroups'?**
```r
            interestingGroups(object) <- interestingGroups
            ^~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:367:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L367) *warning:* **no visible global function definition for ‘assertIsAnImplicitInteger’**
```r
        assertIsAnImplicitInteger(n)
        ^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:369:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L369) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterCols)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:370:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L370) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(clusterRows)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:371:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L371) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
        assert_is_a_bool(legend)
        ^~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:372:9:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L372) *warning:* **no visible global function definition for ‘assertIsAStringOrNULL’**
```r
        assertIsAStringOrNULL(borderColor)
        ^~~~~~~~~~~~~~~~~~~~~
```
[R/plotHeatmap-methods.R:374:13:](https://github.com/steinbaugh/basejump.plots/blob/9fbdf0e16553d6c32cc1e9fda30afb88e8562d97/R/plotHeatmap-methods.R#L374) *style:* **Variable or function name should be snake_case.**
```r
            borderColor <- NA
            ^~~~~~~~~~~
```


More like:
```
auto deviceListContainsDisplayName = [&newentry](const auto& deviceList)
{
std::find_if(deviceList.cbegin(), deviceList.cend()-1,
            [&newentry](const auto &entry) -> bool
            { return entry.name == newentry.name; }
        ) == PlaybackDevices.cend()-1)
};
while(deviceListContainsDisplayName(PlaybackDevices))
{
```
(You can reuse lambda for another list with anonymous namespace/static)
Can be not "compilable", but shows idea.


why clear it `this.TxtDollarAmt.Text = "";` and then add set it `this.TxtDollarAmt.Text += input;`
instead of
`input +="0";`
`this.TxtDollarAmt.Text = input;`
?


Is this really the only way to have `ert-runner` find the package file under test?


you could `["USD_EUR"]["val"].ToString();` here


good


As the author of dcf77pi, you can use dcf77pi-analyze on your desktop just fine.


Created multidev environment [d8-composer-example-site#ci-1](https://dashboard.pantheon.io/sites/8abc751d-4998-46cc-9d35-9331c9acee82#ci-1).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-1-d8-composer-example-site.pantheonsite.io/)


quite an accomplishment. Very nice achievement.


Now cannot deploy because one of the file in your app is larger than the allowed file size limit.
You can either [upgrade](https://zeit.co/account/plan) your plan or delete that file.


It might make sense to report failure twice - once for current and once for update if update is set:

```
cluster_version{type="failure",version="4.0.1",payload="location/registry/image:tag"}  1
cluster_version{type="failure",version="4.0.2",payload="location/registry/image:tag"}  1
```

so that a dashboard could track errors on the edge, not just the node.


It is a good idea to split your work into atomic commits. That way someone who wants to remove the special functionality for Smotra only has to revert the commit, and doesn't have to pick apart your commit.

I also see other random changes that haven't been described


the path for IUnlock.sol is non-existant in this branch at the moment


IUnlock.sol is non-existant in this branch at the moment


refactor isotest suites to new config object

Previews: documentation | landing | table


Now all should be fine again.


@jamessan good idea, and it actually is: https://github.com/neovim/neovim/blob/c45a859171090746c8b81f183474c22e489b8ad0/Makefile#L95

but our travis CI scripts don't (yet) use that `make oldtest` target (doing so would require some work, I think).

Also removing these `helptags ALL` hacks in the oldtests doesn't work (I just tried it locally)--seems like the tests in `src/nvim/testdir` use a different runtimepath or something.


Power Supply not Tested


Hauptsache wir haben ne Lizenz, schöne Sache!


>
>
> It is a good idea to split your work into atomic commits. That way someone who wants to remove the special functionality for Smotra only has to revert the commit, and doesn't have to pick apart your commit.

It was not planned. I was only going to disable hooks for smotra but then I discovered other issues, and it was not possible to split them since they share the same hook.

> I also see other random changes that haven't been described

Which ones exactly? Can you please highlight them?


But CronTimer and ScriptRunner are two different things - can they really share the same location for their scripts?


This also seems to work, in case of `+r`  - I'm not sure if other cases are needed?

```R
setMethod("Arith", signature(e1='RasterLayer', e2='missing'),
          function(e1, e2)
          {
            stopifnot(hasValues(e1))
            return ( setValues(e1,  methods::callGeneric(0, getValues(e1)) ) )

          })
```


cf. https://github.com/atomiclabs/hyperdex/pull/563#issuecomment-434630687


basic high score


PowerPC is bi-endian too and Debian hasn't supported running it in big endian mode for a while... make sure that you are running a big-endian release rather than the current little-endian one.


Yeah, go for it


Thanks!


Now could not deploy this pull request since the `package.json` file doesn't contain a "start" or "now-start" npm script.

	Click here to see the contents of `package.json`

{
  "name": "spike-front",
  "version": "0.1.0",
  "description": "Benchmarking of spike sorting algorithms. Seeing the spike forest for the trees.",
  "main": "server.js",
  "scripts": {
    "start:server": "node server.js"
  },
  "repository": {
    "type": "git",
    "url": "git+https://github.com/elovero/spike-front.git"
  },
  "keywords": [],
  "author": "Elizabeth Lovero",
  "homepage": "https://lillenlen.tech",
  "dependencies": {
    "express": "^4.16.4",
    "@magland/kbucket": "0.12.1"
  }
}

For more information visit https://docs.npmjs.com/cli/start.


C'est pas le bon lien :p


But CronTimer and ScriptRunner are two different things - can they _really_ share the same location for their scripts?


Understood. We could define a base set and and an extendable optional set. We could probably do it smart by a template or class, if we are reading the collection by names from the config.


Is this file being used?


still using input and not raw_input, this is bad practice


Damnit, this is what I was afraid of, and why I held back PR #167 so long, hoping someone would do some proper testing and review =/


exes (removed in 9114c02b) and `reloadnews` (useful for development of news items)


this is incorrect, you need to read the *content* of the file.


there's no need to do the while input loop, if the parameter you've gotten is bad then exit.


yep!  it is rendered in index.jsx as of this commit


`.hr_bot`
`customer.service`.
`common_intellegence.ai`


move the argument parsing into another function, this makes it hard to read


no need for a continue or else clause, just continue.


use `import` not `importe`


Now only 2 little issues:
- WB Picker
- I get strange white points when using contrast slider (shadows, highlights, clarity is okay) in dark areas (best visible with IGV mosaic, but also there with AMaZE):
![bildschirmfoto 2018-11-01 um 22 17 41](https://user-images.githubusercontent.com/30245296/47880698-31c54180-de24-11e8-9c08-1c69731e7edf.png)


Latency in line processing is a minor problem, the worst thing that can happen is that a few lines are buffered before they are processed.

The major problem is latency when processing file system events. I put a comment here that tries to explain this: [https://github.com/fstab/grok_exporter/blob/master/tailer/fileTailer.go#L63-L91](https://github.com/fstab/grok_exporter/blob/master/tailer/fileTailer.go#L63-L91).

The goal is to make file system event processing as fast as possible. I think the `Process()` method is ok now, because it reads all new lines and returns them without waiting for anything.

I am not happy with `runFileTailer()` though, because it writes line by line into the channel, blocking for each line until it is read by the consumer. Setting the channel capacity to 10 solves the problem for the tests in `fileTailer_test.go`, because the tests write less than 10 lines each, but it seems more like a workaround than a general solution.


please don't commit your IDE files and virtual environemnts, they are specific to your machine. use a .gitignore to mitigate this.


move argument parsing into a different function


> exes (removed in [9114c02](https://github.com/multitheftauto/mtasa-blue/commit/9114c02b0fd6129321a46772ef8ca8de018e0c4f))

^^

> and `reloadnews` (useful for development of news items)

I have no idea why that happened. I'll restore it.


Now could not deploy this pull request since the `package.json` file doesn't contain a "start" or "now-start" npm script.

	Click here to see the contents of `package.json`

{
  "name": "spike-front",
  "version": "0.1.0",
  "description": "Benchmarking of spike sorting algorithms. Seeing the spike forest for the trees.",
  "main": "server.js",
  "scripts": {
    "start:server": "node server.js"
  },
  "repository": {
    "type": "git",
    "url": "git+https://github.com/elovero/spike-front.git"
  },
  "keywords": [],
  "author": "Elizabeth Lovero",
  "homepage": "https://lillenlen.tech",
  "dependencies": {
    "express": "^4.16.4",
    "@magland/kbucket": "0.12.1"
  }
}

For more information visit https://docs.npmjs.com/cli/start.


Please don't inject packages by putting them into the packages repo as they will get obsoleted. Supplying initial packages for cyclic dependencies is done through the set of initial packages which is in ```buildmaster/initial-packages``` inside the buildmaster instance by default.


it's already a string, why change it?


1 error....please detect error


[Arduino Nano Incubator By Mark Smith.zip](https://github.com/Mark-Smith2/Arduiuno-Nano-Incubator/files/2540176/Arduino.Nano.Incubator.By.Mark.Smith.zip)


[`f1520b4a85db2dab23ae5028456c69d933161ac8`](:1st_place_medal: )


Oops I messed up


The zsdata is used a lot for cluster size analysis (and in theory to recalculate the noise). I would leave it there, as it is dumped by DAF as well. However, if you don't put any collection name for zs, it won't dump it!


I meant horizontal line, not vertical line...


Ok, cherrypicked these in to 16039e5
Will squash down in to 1 commit for femsolver/ and continue with the PR.


Trying to remove the form and sheet id because I was not sure if it was secure.


I added them back afterwards anyway.


as explained in https://github.com/nim-lang/Nim/commit/f96e2764c4304db7eadd948ade6fef0ad6f93c7e#commitcomment-31141189 I didn't intend to push to devel directly, so I reverted it immediately and sent out https://github.com/nim-lang/Nim/pull/9599 instead


Only set default font-family on body selector (#3115)

Previews: documentation | landing | table


The library that manages the arguments on the kit side already did the _decode_ so no change on the kit side is needed. Tested and working.


@Keader  I can't speak for @Nyeriah , and I no longer work on this project anymore but got an email notification, anyway I believe this change was to fix a bug reported that caused swing timers not to work as expected with slam. I don't have any data indicating what is the expected behavior, but there was an issue tracking this: https://github.com/NoxGaming/TrinityCore/issues/140

Whether this is a change specifically to replicate some 1.12.1 behavior or a bug in 3.3.5 I don't know either.


wrapper here might not be necessary


@MikeTschudi Good catch. I copied that `var reqDomain` line into a helper function and forgot to get rid of it in _startQuestion.


Right :)
Something else, I cannot dump any hit collection after testing the different options.


Tested for 3 days now, no issues with the active pairs and the dynamic-whitelist whatsoever.


Created multidev environment [sfgov#ci-1665](https://dashboard.pantheon.io/sites/91d50373-c4cf-40e4-a646-cb73e16a140c#ci-1665).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-1665-sfgov.pantheonsite.io/)


А при чём тут кодировка исходников? `toupper` будет работать только в том случае, если локаль - `koi8-r`. Т. к. имена мобов, которые берутся из файлов мира - в `koi8-r`. Т. е. по сути - то же самое, но только если локаль выставлена в `koi8-r` (а если нет - то не будет работать). `UPPER` же будет работать при любой локали. Поэтому, выходит, `UPPER` предпочтительней.

Или я чего-то не понимаю? Или ты под исходниками имел ввиду файлы мира?

P.S. Про строку - это да, я согласен.


После сборки мавеном в консоли перейти в папк с *.pom и ввести
**mvn assembly:single**
тогда в архив допишутся депенденсис и манифест, все заработает (графический интерфейс, подключение к серверу баз данных, создание удаление баз данных и прочий функционал).
Пока не понятно только как ... и почему не выходит то же самое сделать в idea //будем думать ..


should be `in sys.modules`


TeamCity Glyssen :: Glyssen pull requests - untagged [Build *.*.64.ad8553cc1071159c176a64a71c095ea90f033489](http://build.palaso.org/viewLog.html?buildId=132871&buildTypeId=Glyssen_GlyssenPullRequestsUntagged) outcome was **FAILURE**
Summary: Compilation error: Glyssen\Glyssen.csproj (new) Build time: 00:00:48


I was just browsing to gain context, and isn't this sort of an overview of Apache Beam for users? Was there feedback that the contribution guide should also introduce the product?


Adarsh, it looked like the coverage tests left quite a bit of the f2py-pp.py program uncovered.  What should I do to provide inputs that improve coverage?


Thanks Hosung,
Modified Mailroom_part2 and trigrams based on your suggestions.
Arun


@jpavlav done.


Thanks Hosung


This offset needs updated.


`g.latlng` prints out a long decimal, so if you wanted to round it to a certain number of decimal places, you could do that in a variety of ways.

Also, you may know this, but it's not necessary to create the `y` and `z` variables - you can just pass their values directly into `.format`

Good job!


ZoneAirFlow6574 (rraustad) - Win64-Windows-7-VisualStudio-14: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


<?php date ('Y'); ?>

resolveria tb


missing opening [


Created multidev environment [sfgov#ci-1667](https://dashboard.pantheon.io/sites/91d50373-c4cf-40e4-a646-cb73e16a140c#ci-1667).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-1667-sfgov.pantheonsite.io/)


`[Take_a-load.off](:+1: )`
`smartify.my_codes`


油管香蜜评论分析代码


better name, since it's specific to a Wovyn _CO₂_ sensor


Including Sketch Gerbers, Eagle 7.7 Files
PowerSupply Board Untested


[R/assignAndSaveData.R:28:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/assignAndSaveData.R#L28) *style:* **Variable or function name should be snake_case.**
```r
assignAndSaveData <- function(
^~~~~~~~~~~~~~~~~
```
[R/assignAndSaveData.R:36:26:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/assignAndSaveData.R#L36) *warning:* **no visible binding for global variable ‘compress’**
```r
    assertFormalCompress(compress)
                         ^~~~~~~~
```
[R/export-methods.R:134:13:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L134) *style:* **Variable or function name should be snake_case.**
```r
            grepChoices <- paste0("\\.", choices, "$")
            ^~~~~~~~~~~
```
[R/export-methods.R:164:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L164) *style:* **Variable or function name should be snake_case.**
```r
        barcodesFile <- paste0(file, ".colnames")
        ^~~~~~~~~~~~
```
[R/export-methods.R:169:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L169) *style:* **Variable or function name should be snake_case.**
```r
        genesFile <- paste0(file, ".rownames")
        ^~~~~~~~~
```
[R/export-methods.R:228:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L228) *style:* **Variable or function name should be snake_case.**
```r
        assayNames <- assayNames(x)
        ^~~~~~~~~~
```
[R/export-methods.R:252:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L252) *style:* **Variable or function name should be snake_case.**
```r
        rowData <- rowData(x)
        ^~~~~~~
```
[R/export-methods.R:262:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L262) *style:* **Variable or function name should be snake_case.**
```r
        colData <- colData(x)
        ^~~~~~~
```
[R/export-methods.R:293:26:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L293) *warning:* **no visible binding for global variable ‘compress’**
```r
        assert_is_a_bool(compress)
                         ^~~~~~~~
```
[R/export-methods.R:309:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L309) *style:* **Variable or function name should be snake_case.**
```r
        reducedDimNames <- reducedDimNames(x)
        ^~~~~~~~~~~~~~~
```
[R/export-methods.R:316:21:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/export-methods.R#L316) *style:* **Variable or function name should be snake_case.**
```r
                    reducedDim <- reducedDims(x)[[name]]
                    ^~~~~~~~~~
```
[R/initDir.R:20:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/initDir.R#L20) *style:* **Variable or function name should be snake_case.**
```r
initDir <- function(dir) {
^~~~~~~
```
[R/loadData.R:34:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadData.R#L34) *style:* **Variable or function name should be snake_case.**
```r
loadData <- function(
^~~~~~~~
```
[R/loadData.R:58:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadData.R#L58) *style:* **Variable or function name should be snake_case.**
```r
.safeLoad <- function(
^~~~~~~~~
```
[R/loadData.R:78:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadData.R#L78) *style:* **Variable or function name should be snake_case.**
```r
    tmpEnvir <- new.env()
    ^~~~~~~~
```
[R/loadData.R:120:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadData.R#L120) *style:* **Variable or function name should be snake_case.**
```r
.safeLoadRDS <- function(file, envir = parent.frame()) {
^~~~~~~~~~~~
```
[R/loadDataAsName.R:22:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadDataAsName.R#L22) *style:* **Variable or function name should be snake_case.**
```r
loadDataAsName <- function(
^~~~~~~~~~~~~~
```
[R/loadRemoteData.R:23:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadRemoteData.R#L23) *style:* **Variable or function name should be snake_case.**
```r
loadRemoteData <- function(url, envir = parent.frame()) {
^~~~~~~~~~~~~~
```
[R/loadRemoteData.R:60:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/loadRemoteData.R#L60) *style:* **Variable or function name should be snake_case.**
```r
.listRData <- function(
^~~~~~~~~~
```
[R/localOrRemoteFile.R:28:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/localOrRemoteFile.R#L28) *style:* **Variable or function name should be snake_case.**
```r
localOrRemoteFile <- function(file) {
^~~~~~~~~~~~~~~~~
```
[R/package.R:46:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/package.R#L46) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/saveData.R:33:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/saveData.R#L33) *style:* **Variable or function name should be snake_case.**
```r
saveData <- function(
^~~~~~~~
```
[R/transmit.R:38:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L38) *style:* **Variable or function name should be snake_case.**
```r
    remoteDir,
    ^~~~~~~~~
```
[R/transmit.R:39:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L39) *style:* **Variable or function name should be snake_case.**
```r
    localDir = ".",
    ^~~~~~~~
```
[R/transmit.R:50:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L50) *style:* **Variable or function name should be snake_case.**
```r
        remoteDir <- paste0(remoteDir, "/")
        ^~~~~~~~~
```
[R/transmit.R:52:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L52) *style:* **Variable or function name should be snake_case.**
```r
    localDir <- initDir(localDir)
    ^~~~~~~~
```
[R/transmit.R:68:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L68) *style:* **Variable or function name should be snake_case.**
```r
    remoteTxt <- getURL(remoteDir)
    ^~~~~~~~~
```
[R/transmit.R:76:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L76) *style:* **Variable or function name should be snake_case.**
```r
    remoteFiles <- remoteTxt %>%
    ^~~~~~~~~~~
```
[R/transmit.R:100:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L100) *style:* **Variable or function name should be snake_case.**
```r
    remotePaths <- paste(gsub("/$", "", remoteDir), match, sep = "/")
    ^~~~~~~~~~~
```
[R/transmit.R:110:5:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L110) *style:* **Variable or function name should be snake_case.**
```r
    localPaths <- file.path(localDir, name)
    ^~~~~~~~~~
```
[R/transmit.R:123:9:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/transmit.R#L123) *style:* **Variable or function name should be snake_case.**
```r
        localPaths <- localPaths[!exists]
        ^~~~~~~~~~
```
[R/writeCounts.R:42:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/R/writeCounts.R#L42) *style:* **Variable or function name should be snake_case.**
```r
writeCounts <- function(..., dir = ".", compress = FALSE) {
^~~~~~~~~~~
```
[tests/testthat/helper_cache.R:25:20:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/tests/testthat/helper_cache.R#L25) *style:* **Variable or function name should be snake_case.**
```r
    FUN = function(cacheURL, file, envir) {
                   ^~~~~~~~
```
[tests/testthat/helper_globals.R:1:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/tests/testthat/helper_globals.R#L1) *style:* **Variable or function name should be snake_case.**
```r
cacheURL <- basejump.globals::basejumpCacheURL
^~~~~~~~
```
[tests/testthat/test_import_export.R:438:1:](https://github.com/steinbaugh/basejump.io/blob/82cbdfab8bbcbb49e351d1497061648bd14c85bb/tests/testthat/test_import_export.R#L438) *style:* **Variable or function name should be snake_case.**
```r
remoteDir <- paste(
^~~~~~~~~
```


Bless you.


Now cannot deploy because one of the file in your app is larger than the allowed file size limit.
You can either [upgrade](https://zeit.co/account/plan) your plan or delete that file.


We probably want to implement this into the compiler. It's a common pattern in smart contracts.