Puzzle `603-27650b29` discovered in   [`shopelectro/tests/tests_commands.py`](  https://github.com/fidals/shopelectro/blob/master/shopelectro/tests/tests_commands.py)   and submitted as #625. Please, remember that the puzzle was not   necessarily added in this particular commit. Maybe it was added earlier, but   we discovered it only now.


Create dummy_file.md

Preview: Maputnik test build


i'm afraid this is an environment setup topic, as seen in my deployed example express mounting and path resolution works as expected from the node app's perspective.


Ah, I see now.
(Restored in d165905d2497e52fa4d98607182f22d843780aea)


Thanks


För en kortare notation så kan man använda `str(j)`.


I gotcha -- do I need to do anything to take it over? Or do you just transfer it to me?


@Dev43 Hey thanks! one correction - youtube - https://www.youtube.com/rightmesh


Why are we writing this logic here??? just toremove object id field?


now that's what i call a decent commit :) :+1:


Is there any way to get a binary of this fixed version? im eager to use it but couldnt get it to build. cheers bk


There are 3! King’s 1/151/32!

Yasmin Faghihi
Head of Near and Middle Eastern Department
Manuscripts and Printed Collections
Cambridge University Library
West Road
CB3 9DR UK
Tel.: +44 1223 764739
Email: yf227@cam.ac.uk<mailto:yf227@cam.ac.uk>
Chair Middle East Libraries COMmittee (MELCOM) UK
http://www.melcom.org.uk/
Co-Chair FIHRIST
http://www.fihrist.org.uk/home

From: Andrew Morrison <notifications@github.com>
Sent: 01 November 2018 16:26
To: fihristorg/fihrist-mss <fihrist-mss@noreply.github.com>
Cc: Yasmin Faghihi <yf227@cam.ac.uk>; Author <author@noreply.github.com>
Subject: Re: [fihristorg/fihrist-mss] upgraded (8e6c5d5)

Please check the Changes tab in your copy of GitHub Desktop. Hopefully there are no King's files listed there.

—
You are receiving this because you authored the thread.
Reply to this email directly, view it on GitHub<https://github.com/fihristorg/fihrist-mss/commit/8e6c5d57456a1b3fd94271164410425e87edd04f#commitcomment-31137098>, or mute the thread<https://github.com/notifications/unsubscribe-auth/AjZPWaz7EY-ocUlYHYMLhNRQ5Qx3AqtJks5uqyCngaJpZM4YEMT_>.


Is this method really required? We can easily resolve image path from UI if it's kept ui/localstorage. No need to make it complex.


I don't have a fix for the oom. If you have one then please.


It's not though.. Do you not see how the console.log output says it is going to set a cookie on one path, and then it doesn't?


Update config.yml

Preview: Maputnik test build


I think this might be temp file to be used because once all module development is done then there is no need for this.


Bùi Phương Nhung - 17020947


My opinion is that even this is not required.


Can this config be inside CopySource?


@aurel-l I was wondering why the selector wasn't fully working on the IproScan Pages, until I see the message of this commit!


Oups … yes :) great.


Some variable names haven't been changed yet, but it is already usable.


@asr 014ea684be1f9c670180fa7c56e85ecfd6df6138


@matthewjmiller


merge confirmed


Created multidev environment [d8-digital-stlawu#ci-336](https://dashboard.pantheon.io/sites/9f185cec-9c0b-4fcb-972f-9a5f2f6ed252#ci-336).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-336-d8-digital-stlawu.pantheonsite.io/)


This should have been `Setting_6_3_0_2.update({`!


Там и передаётся char: `buf[0]`. Если там и не работает, то, вероятно, из-за того, что первый символ специальный какой-нибудь. Типа цвета.


Edited the raid section


Но тогда и новый вариант работать не должен.


Merging master branch with reorganization branch


I do not trust an advertising captchas.


Hi Bob,

Yes, trigger. Each LFO with his trigger. It could be a Jack In / button.

In a musical synth modular world, if you are using a step sequencer, or drum machine, arpeggiator, etc with "sync out" (any voltage, say 5v) if we receive this voltage in a input pin, we can "trigger" to restart the oscillators from the beggining. So, if we are feeding a VCF with this LFO, the notes that are playing in the rig, are all equally "filtered" acording the rate of the LFO.

The common rule is that the rate of the LFO must be minor that the "triggering" rate (to hear the effect)

Hope to be clear!
Gabriel


Copy of this build can be found at
https://www.mewbuilds.com/build/5c323fc952b7aaab2016dd973389f5137556b63f/index.html
                       https://www.cloudflare-ipfs.com/ipfs/QmWA5TvULWUDJ3f6EUVuwT2mbAaCapr6GmreFye7LbXrmA


.jhkjb


We may have the oscilators working freely, wich is nice use of them too.. but if i plug a pulse on the "sync", then, it restarts from cero..

This is an idea that had in mind meanwhile i was working in your proyect, makes sense to you?

Regards!
Gabriel


You forgot to add the checksums for:
fpr-24208a.ic72
fpr-24407.ic72
fpr-24407_123.ic72

They have all the same value === CRC(a738ea1c)


IBM Cloud [toolchain](https://console.bluemix.net/devops/toolchains/8839f9f8-ee5d-429f-8749-52267c653952?env_id=ibm%3Ayp%3Aus-south "ws-expose"): [Delivery Pipeline](https://console.bluemix.net/devops/pipelines/5c41e84d-5968-4649-8c7b-52afb41b0a6e?env_id=ibm%3Ayp%3Aus-south "ws-expose-pipeline") deployed [script_net](https://github.com/yeltnar/script_net/releases/tag/deploy-ibm-yp-us-south-andcbrant-gmail.com-dev-20181101-165317 "deploy-ibm-yp-us-south-andcbrant-gmail.com-dev-20181101-165317") to [dev](https://console.bluemix.net/apps/e68f5516-a561-42c7-ac49-af54fea27ed3?env_id=ibm:yp:us-south "ibm:yp:us-south:andcbrant@gmail.com:dev"), including this commit


Hi! This is the friendly automated conda-forge-webservice.

I updated the Github team because of this commit.

- @duncanmmacleod was added to this feedstock maintenance team.

You should get push access to this feedstock and CI services.

Feel free to join the community [chat room](https://gitter.im/conda-forge/conda-forge.github.io).

NOTE: Please make sure to not push to the repository directly.
      Use branches in your fork for any changes and send a PR.
      More details [here](https://conda-forge.org/docs/conda-forge_gotchas.html#using-a-fork-vs-a-branch-when-updating-a-recipe)


I personnly use `include` in current `application/config/config.php` then no need to update config-default.php when `git reset`


I believe this is intentional, they really do have the same CRC value, as the security of the system checks the CRC.


thanks


We shouldn't be creating methods that only work through extensions. This method should take a callback and return the result through that (which means the JS method also needs to take a callback. cc @emerick


I think it must be updated in internal.php :  https://github.com/LimeSurvey/LimeSurvey/blob/4c31f9fc152d5049b45cb1751c8bd55428787136/application/config/internal.php#L11

At minima for console : https://github.com/LimeSurvey/LimeSurvey/blob/4c31f9fc152d5049b45cb1751c8bd55428787136/application/commands/console.php#L27


Now could not deploy this pull request since the `now.json` file explicitly sets `dotenv` to true.
However, there's no `.env` file in the repo.

Commit a `.env` file or unset the `dotenv` flag.
For secret environment variables, check out [Now Secrets](https://zeit.co/docs/getting-started/secrets).


Dann wäre eine Idee zu prüfen ob da ein State oder ein Channel/Device drin ist und beim state ein subscribe auf den state zu machen und sonst auf "<wert>.*" ... dann subscribst du alles "darunter" aber auch nur das


Please change this one back.  Design load is a concept independent of blast load.


Fleißiges Bienchen ^^


Copying them to /boot? Sure, although it would only be true after that commit as it wasn't introduced in a major release. The instructions for setting the dtb in the kernel boot setup of u-boot will still need to be adjusted.


Did you completely uninstall and reinstall the addon?


Please introduce LG and IG back into the document.  Even if we aren't currently dealing with this kind of glass, we may want to include it in the future.


freecodeCamp


Hi! This is the friendly automated conda-forge-webservice.

I updated the Github team because of this commit.

- @dbast, @halldc were added to this feedstock maintenance team.

You should get push access to this feedstock and CI services.

Feel free to join the community [chat room](https://gitter.im/conda-forge/conda-forge.github.io).

NOTE: Please make sure to not push to the repository directly.
      Use branches in your fork for any changes and send a PR.
      More details [here](https://conda-forge.org/docs/conda-forge_gotchas.html#using-a-fork-vs-a-branch-when-updating-a-recipe)


I would have expected
`{ T(-25, 0), T(-16, 0), T(-16, 0), T(-9, 0) },`

but your first row currently reads
`{ T(-25, 0), T(-16, 0), T(-10, 5), T( 6, 5) },`

is this as intended ?


No, please reintroduce LG and IG.  We may want them in the future.  They are also part of the definitions from the ASTM document.


Please restore the original definition.


![](https://github.trello.services/images/mini-trello-icon.png) [Deployment](https://trello.com/c/4GqfXRbY/7-deployment)


No crash here with that. Did not try yet WB4 branch.


We just say section, not Subsection when referencing any section.  Please change Subsection back to Section.


Won't this fail to load if the resource is not locally on the disk in the `Fonts' folder?

The `/@GSF` means it will load from the `GSF.Web.dll` assembly.


the Purifier block dose not work correctly, and gives you the smash bottle most of the time. other than that works a lot nicer


No need to import, you are not using it.


The changes made were adding divs around available puppy photos trying to create a gallery look.
And CSS changes that made the layout3 design almost the way I want it


Please restore the original text.


Your constructor is `payable`. What are you doing with the Ether sent along the deployment?


@OR13, are you able to submit a pull request so you get credits for this work?


This is a faucet, not a splitter.


Could you put these into a pull request?


Your balancer cutting of the path that the provider works with is the environment setup problem.


I know it's a simple change, but can you put it into a pull request? I'd rather you get credit for it.


@vajihehm I have completed reviewing your changes.  Please address the comments above.  I am now going to have a pass through the current documentation to check the parts that you have added and to determine if there are other changes that should be made.


Is there a reason to be removed when archive repo is still active?


SystemSP network board firmware is 2Mbyte ROM, which consists of 2x 1Mbyte chunks, each of them have static CRC32 0xffffffff by Sega's design, two of these joined produce static CRC as well, 0xa738ea1c

there is same thing with Sega Naomi/Chihiro/Triforce firmwares.


Forked from https://github.com/xFFFFF/Gekko-BacktestTool but working with latest versions of Gekko bot


+ 2413


listPerson ->


this.people = listPersons


Thanks for the update, but my bot is still stuck on the loading screen(where daily rewards appears), it does not press the "PLAY" btn when i try to use this function, can anyone confirm the problem?


Still miss you, dude!


last submit


`# UCLIBC_BUILD_SSP is not set` wird dringend benötigt, sonst kommt die Fehlermeldung [undefined reference to `__stack_chk_guard'](https://www.ip-phone-forum.de/threads/freetz-f%C3%BCr-6490.276768/page-9#post-2302602)


good ok


Created multidev environment [terc-teacher-leadership#ci-30](https://dashboard.pantheon.io/sites/0288ffc4-d600-4966-bc35-7ae7c30823a4#ci-30).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-30-terc-teacher-leadership.pantheonsite.io/)


а как он для строки работать будет? и у нас есть вариант отсечения цвета у строки


indeed, mais jvai virer tt ca


good


No, it is just telling the browser where to hit.  You may need to put in you config file something like --

  <add name="EmbeddedResourceHandler-GSFSharedContentFonts" path="@GSF/Web/Shared/Content/Fonts/*" verb="*" type="System.Web.StaticFileHandler" allowPathInfo="true"/>


What do you recommend I do?


ok


like


This fixes the compile error. The true branch of the `#if` looks a bit weird now, by first using the value of `MAX_MEM_LEVEL` then checking for its existence. In (probably not very important) corner cases, behaviour will be different from original `zip.h`.

If the goal is to prepare for a missing `#include "zlib.h"` _and_ a defined `HAVE_ZLIB`, this would solve it better:
```c
#if defined(HAVE_ZLIB) && defined(MAX_MEM_LEVEL)
#  if MAX_MEM_LEVEL >= 8
#    define DEF_MEM_LEVEL 8
#  else
#    define DEF_MEM_LEVEL  MAX_MEM_LEVEL
#  endif
#else
```


Думаю, будет лучше положить их в бд


Not sure why the password length should only one of these numbers, in my case (freshly installed MySQL 8.0 server with freshly (from HeidiSQL) created user) it's 72. (plugin column says »caching_sha2_password«). Login via HeidiSQL works, too. Maybe this check is outdated?

I don't know too much about the internal workings of MySQL, but I'm happy to provide more info if needed.


add by rub21


a


The VCS never forgets.


The following doc(s) have been deployed to the [3086script](https://3086script-static-docs.pantheonsite.io/docs) Multidev environment:
- [/docs/terminus/scripting](https://3086script-static-docs.pantheonsite.io/docs/terminus/scripting)


Bei dieser Änderung hat sich ein Fehler eingeschlichen, z.B. für die 7490 und die 6{4,5}90:
Das nfsd.ko Modul muss erzeugt werden, wird aber nicht mit ins Image aufgenommen, da FREETZ_NFS_SUPPORT_AVAILABLE_AS_MODULE nicht aktiviert ist. Siehe auch [config/ui/modules.in](https://github.com/Freetz/freetz/blob/5a78054a5bb7845483b11f7802fb267b9f369562/config/ui/modules.in#L448)


Created multidev environment [rescue-x#oct-18](https://dashboard.pantheon.io/sites/c8430b75-4272-4aca-bfcd-206b12279315#oct-18).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://oct-18-rescue-x.pantheonsite.io/)


Forward using the original path and set up your node routing accordingly.

You might also take my posted example and write an nginx conf to have me reproduce and verify there’s either a bug or this is indeed just what i think it is - a setup issue


[R/assertAllAreNonExisting.R:10:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreNonExisting.R#L10) *style:* **Variable or function name should be snake_case.**
```r
assertAllAreNonExisting <- function(
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertAllAreUniqueGeneNames.R:16:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L16) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertAllAreUniqueGeneNames.R:19:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L19) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertAllAreUniqueGeneNames.R:26:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L26) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertAllAreUniqueGeneNames.R:28:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L28) *style:* **Variable or function name should be snake_case.**
```r
assertAllAreUniqueGeneNames <- function(object, genes) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertAllAreUniqueGeneNames.R:39:5:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L39) *style:* **Variable or function name should be snake_case.**
```r
    allGenes <- object[["geneName"]]
    ^~~~~~~~
```
[R/assertAllAreUniqueGeneNames.R:44:5:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreUniqueGeneNames.R#L44) *style:* **Variable or function name should be snake_case.**
```r
    duplicatedGenes <- allGenes[which(duplicated(allGenes))]
    ^~~~~~~~~~~~~~~
```
[R/assertAllAreURL.R:11:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreURL.R#L11) *style:* **Variable or function name should be snake_case.**
```r
assertAllAreURL <- function(object) {
^~~~~~~~~~~~~~~
```
[R/assertAllAreURL.R:28:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreURL.R#L28) *style:* **Variable or function name should be snake_case.**
```r
isURL <- function(object) {
^~~~~
```
[R/assertAllAreValidNames.R:8:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreValidNames.R#L8) *style:* **Variable or function name should be snake_case.**
```r
assertAllAreValidNames <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~
```
[R/assertAllAreValidNames.R:20:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreValidNames.R#L20) *style:* **Variable or function name should be snake_case.**
```r
assertHasValidDimnames <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~
```
[R/assertAllAreValidNames.R:29:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreValidNames.R#L29) *style:* **Variable or function name should be snake_case.**
```r
assertHasValidNames <- function(object) {
^~~~~~~~~~~~~~~~~~~
```
[R/assertAllAreValidNames.R:40:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreValidNames.R#L40) *style:* **Variable or function name should be snake_case.**
```r
validDimnames <- function(object) {
^~~~~~~~~~~~~
```
[R/assertAllAreValidNames.R:76:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAllAreValidNames.R#L76) *style:* **Variable or function name should be snake_case.**
```r
validNames <- function(object) {
^~~~~~~~~~
```
[R/assertAreGeneAnnotations.R:17:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAreGeneAnnotations.R#L17) *style:* **Variable or function name should be snake_case.**
```r
assertAreGeneAnnotations <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertAreTranscriptAnnotations.R:18:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertAreTranscriptAnnotations.R#L18) *style:* **Variable or function name should be snake_case.**
```r
assertAreTranscriptAnnotations <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertFormalCompress.R:8:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalCompress.R#L8) *style:* **Variable or function name should be snake_case.**
```r
assertFormalCompress <- function(object) {
^~~~~~~~~~~~~~~~~~~~
```
[R/assertFormalGene2Symbol.R:18:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalGene2Symbol.R#L18) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertFormalGene2Symbol.R:51:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalGene2Symbol.R#L51) *style:* **Variable or function name should be snake_case.**
```r
assertFormalGene2Symbol <- function(
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertFormalInterestingGroups.R:17:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L17) *style:* **Variable or function name should be snake_case.**
```r
assertFormalInterestingGroups <- function(object, interestingGroups) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertFormalInterestingGroups.R:17:51:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L17) *style:* **Variable or function name should be snake_case.**
```r
assertFormalInterestingGroups <- function(object, interestingGroups) {
                                                  ^~~~~~~~~~~~~~~~~
```
[R/assertFormalInterestingGroups.R:19:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L19) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/assertFormalInterestingGroups.R:22:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L22) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/assertFormalInterestingGroups.R:31:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L31) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/assertFormalInterestingGroups.R:34:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertFormalInterestingGroups.R#L34) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/assertHasAggregateInfo.R:2:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L2) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertHasAggregateInfo.R:4:3:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L4) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/assertHasAggregateInfo.R:13:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L13) *style:* **Variable or function name should be snake_case.**
```r
assertHasAggregateInfo <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~
```
[R/assertHasAggregateInfo.R:15:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L15) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/assertHasAggregateInfo.R:22:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L22) *style:* **Variable or function name should be snake_case.**
```r
hasAggregateInfo <- function(object) {
^~~~~~~~~~~~~~~~
```
[R/assertHasAggregateInfo.R:25:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L25) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/assertHasAggregateInfo.R:26:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L26) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/assertHasAggregateInfo.R:27:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasAggregateInfo.R#L27) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/assertHasRownames.R:17:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasRownames.R#L17) *style:* **Variable or function name should be snake_case.**
```r
assertHasRownames <- function(object) {
^~~~~~~~~~~~~~~~~
```
[R/assertHasRownames.R:33:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertHasRownames.R#L33) *style:* **Variable or function name should be snake_case.**
```r
hasRownames <- function(object) {
^~~~~~~~~~~
```
[R/assertIsAlpha.R:10:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsAlpha.R#L10) *style:* **Variable or function name should be snake_case.**
```r
assertIsAlpha <- function(object) {
^~~~~~~~~~~~~
```
[R/assertIsAnIntegerOrNULL.R:9:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsAnIntegerOrNULL.R#L9) *style:* **Variable or function name should be snake_case.**
```r
assertIsAnIntegerOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsANumberOrNULL.R:9:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsANumberOrNULL.R#L9) *style:* **Variable or function name should be snake_case.**
```r
assertIsANumberOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsAStringOrNULL.R:9:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsAStringOrNULL.R#L9) *style:* **Variable or function name should be snake_case.**
```r
assertIsAStringOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsColorScaleContinuousOrNULL.R:11:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsColorScaleContinuousOrNULL.R#L11) *style:* **Variable and function names should not be longer than 30 characters.**
```r
assertIsColorScaleContinuousOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsColorScaleContinuousOrNULL.R:11:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsColorScaleContinuousOrNULL.R#L11) *style:* **Variable or function name should be snake_case.**
```r
assertIsColorScaleContinuousOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsColorScaleDiscreteOrNULL.R:11:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsColorScaleDiscreteOrNULL.R#L11) *style:* **Variable and function names should not be longer than 30 characters.**
```r
assertIsColorScaleDiscreteOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsColorScaleDiscreteOrNULL.R:11:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsColorScaleDiscreteOrNULL.R#L11) *style:* **Variable or function name should be snake_case.**
```r
assertIsColorScaleDiscreteOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsDir.R:9:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsDir.R#L9) *style:* **Variable or function name should be snake_case.**
```r
assertIsDir <- function(object) {
^~~~~~~~~~~
```
[R/assertIsFillScaleContinuousOrNULL.R:12:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsFillScaleContinuousOrNULL.R#L12) *style:* **Variable and function names should not be longer than 30 characters.**
```r
assertIsFillScaleContinuousOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsFillScaleContinuousOrNULL.R:12:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsFillScaleContinuousOrNULL.R#L12) *style:* **Variable or function name should be snake_case.**
```r
assertIsFillScaleContinuousOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsFillScaleDiscreteOrNULL.R:12:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsFillScaleDiscreteOrNULL.R#L12) *style:* **Variable and function names should not be longer than 30 characters.**
```r
assertIsFillScaleDiscreteOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsFillScaleDiscreteOrNULL.R:12:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsFillScaleDiscreteOrNULL.R#L12) *style:* **Variable or function name should be snake_case.**
```r
assertIsFillScaleDiscreteOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsHeaderLevel.R:10:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsHeaderLevel.R#L10) *style:* **Variable or function name should be snake_case.**
```r
assertIsHeaderLevel <- function(object) {
^~~~~~~~~~~~~~~~~~~
```
[R/assertIsHexColorFunctionOrNULL.R:13:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsHexColorFunctionOrNULL.R#L13) *style:* **Variable or function name should be snake_case.**
```r
assertIsHexColorFunctionOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:13:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L13) *style:* **Variable or function name should be snake_case.**
```r
assertIsAnImplicitInteger <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:24:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L24) *style:* **Variable and function names should not be longer than 30 characters.**
```r
assertIsAnImplicitIntegerOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:24:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L24) *style:* **Variable or function name should be snake_case.**
```r
assertIsAnImplicitIntegerOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:34:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L34) *style:* **Variable or function name should be snake_case.**
```r
assertIsImplicitInteger <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:45:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L45) *style:* **Variable or function name should be snake_case.**
```r
assertIsImplicitIntegerOrNULL <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:55:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L55) *style:* **Variable or function name should be snake_case.**
```r
isAnImplicitInteger <- function(object) {
^~~~~~~~~~~~~~~~~~~
```
[R/assertIsImplicitInteger.R:68:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/R/assertIsImplicitInteger.R#L68) *style:* **Variable or function name should be snake_case.**
```r
isImplicitInteger <- function(object) {
^~~~~~~~~~~~~~~~~
```
[tests/testthat/test_assertions.R:5:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L5) *style:* **Variable or function name should be snake_case.**
```r
DataFrame <- S4Vectors::DataFrame
^~~~~~~~~
```
[tests/testthat/test_assertions.R:6:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L6) *style:* **Variable or function name should be snake_case.**
```r
Gene2Symbol <- basejump.classes::Gene2Symbol
^~~~~~~~~~~
```
[tests/testthat/test_assertions.R:8:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L8) *style:* **Variable or function name should be snake_case.**
```r
rowData <- SummarizedExperiment::rowData
^~~~~~~
```
[tests/testthat/test_assertions.R:9:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L9) *style:* **Variable or function name should be snake_case.**
```r
rowRanges <- SummarizedExperiment::rowRanges
^~~~~~~~~
```
[tests/testthat/test_assertions.R:109:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L109) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[tests/testthat/test_assertions.R:138:1:](https://github.com/steinbaugh/basejump.assertions/blob/6c94f8bafbf8c80b33911ad1a8aeac19dc6bbb42/tests/testthat/test_assertions.R#L138) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```


test


@chenwei-tw: The operation width for non-floating-point instructions is defined to be the maximum of the source register widths.  478919e3fccf71b55fa44bbf62140491c46307ce should clarify this.


Fixed #2


Should schedule_interval not be `@daily`, based on the explanation below?


Tested in Chrome 70.0.3538.77. This will not work as expected for `disabled` when the value is `false`. The attribute will still be present, rendered as `[disabled="false"]`. Thus, the input will still be disabled. You'll need to use `.removeAttribute()` instead.


I agree, that is a much better way. I have made the changes in dev - along with more fixes for aes. Should be good now.


Successfully aliased the URL <https://spotify-util-vhcabifkdz.now.sh> to the following alias.

* https://spotify-util.now.sh


Successfully aliased the URL <https://hnpwa-nhmcgverdr.now.sh> to the following alias.

* https://hnpwa.now.sh


I know understand that since we were able to prove your package is setting the path correctly, it has to be our load balancer rewriting.

Thank you for all of your help! Sorry for the false alaram.


New wsdot project, just getting started.


Aah, nice catch. I suppose I didn't test that? I'm actually surprised that the unit tests didn't catch it...
Please use:

```python
# option 2: ignores return_root in python2.7
except ImportError:
    module = None
except AttributeError:
    try: # Python 2.7
        module = __import__(module_name)
    except ImportError as e:
        module = None
```


[R/EggNOG.R:10:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L10) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(has_internet())
        ^~~~~~~~~~~
```
[R/EggNOG.R:10:21:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L10) *warning:* **no visible global function definition for ‘has_internet’**
```r
        assert_that(has_internet())
                    ^~~~~~~~~~~~
```
[R/EggNOG.R:12:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L12) *style:* **Variable or function name should be snake_case.**
```r
            categoriesFile <- file.path(basejumpCacheURL, "cog.txt")
            ^~~~~~~~~~~~~~
```
[R/EggNOG.R:12:41:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L12) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            categoriesFile <- file.path(basejumpCacheURL, "cog.txt")
                                        ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:13:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L13) *style:* **Variable or function name should be snake_case.**
```r
            eunogFile <- file.path(basejumpCacheURL, "eunog.tsv.gz")
            ^~~~~~~~~
```
[R/EggNOG.R:13:36:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L13) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            eunogFile <- file.path(basejumpCacheURL, "eunog.tsv.gz")
                                   ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:14:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L14) *style:* **Variable or function name should be snake_case.**
```r
            nogFile <- file.path(basejumpCacheURL, "nog.tsv.gz")
            ^~~~~~~
```
[R/EggNOG.R:14:34:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L14) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            nogFile <- file.path(basejumpCacheURL, "nog.tsv.gz")
                                 ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:22:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L22) *style:* **Variable or function name should be snake_case.**
```r
            categoriesFile <- paste(
            ^~~~~~~~~~~~~~
```
[R/EggNOG.R:27:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L27) *style:* **Variable or function name should be snake_case.**
```r
            eunogFile <- paste(
            ^~~~~~~~~
```
[R/EggNOG.R:34:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L34) *style:* **Variable or function name should be snake_case.**
```r
            nogFile <- paste(
            ^~~~~~~
```
[R/EggNOG.R:42:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L42) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(categoriesFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:43:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L43) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(eunogFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:44:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L44) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(nogFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:98:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L98) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .prototypeMetadata
        ^~~~~~~~
```
[R/EggNOG.R:98:27:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/EggNOG.R#L98) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
        metadata(data) <- .prototypeMetadata
                          ^~~~~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:24:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L24) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:38:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L38) *warning:* **no visible global function definition for ‘expand’**
```r
        data <- expand(data)
                ^~~~~~
```
[R/Ensembl2Entrez.R:42:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L42) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(!any(duplicated(unmapped)))
        ^~~~~~~~~~~
```
[R/Ensembl2Entrez.R:60:13:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L60) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
            assert_is_list(entrez)
            ^~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:82:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L82) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:82:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L82) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:83:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L83) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:83:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L83) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:92:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L92) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:92:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L92) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:107:19:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L107) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:108:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Ensembl2Entrez.R#L108) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```
[R/Gene2Symbol-methods.R:27:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L27) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:69:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L69) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .genomeMetadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:69:27:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L69) *warning:* **no visible global function definition for ‘.genomeMetadata’**
```r
        metadata(data) <- .genomeMetadata(object)
                          ^~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:70:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L70) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:70:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L70) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:91:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L91) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:91:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L91) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:117:19:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L117) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:118:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Gene2Symbol-methods.R#L118) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```
[R/HGNC2Ensembl.R:10:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L10) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(has_internet())
        ^~~~~~~~~~~
```
[R/HGNC2Ensembl.R:10:21:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L10) *warning:* **no visible global function definition for ‘has_internet’**
```r
        assert_that(has_internet())
                    ^~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:13:31:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L13) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            file <- file.path(basejumpCacheURL, "hgnc.txt.gz")
                              ^~~~~~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:15:21:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L15) *warning:* **no visible binding for global variable ‘.hgncURL’**
```r
            file <- .hgncURL
                    ^~~~~~~~
```
[R/HGNC2Ensembl.R:25:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L25) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
        data <- camel(data)
                ^~~~~
```
[R/HGNC2Ensembl.R:32:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L32) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .prototypeMetadata
        ^~~~~~~~
```
[R/HGNC2Ensembl.R:32:27:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L32) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
        metadata(data) <- .prototypeMetadata
                          ^~~~~~~~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:39:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/HGNC2Ensembl.R#L39) *style:* **Variable or function name should be snake_case.**
```r
.hgncURL <- paste(
^~~~~~~~
```
[R/internal.R:16:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L16) *style:* **Variable or function name should be snake_case.**
```r
.prototypeMetadata <- list(
^~~~~~~~~~~~~~~~~~
```
[R/internal.R:21:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L21) *style:* **Variable or function name should be snake_case.**
```r
.hasPrototypeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:28:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L28) *style:* **Variable or function name should be snake_case.**
```r
.assertHasPrototypeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:38:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L38) *style:* **Variable or function name should be snake_case.**
```r
.prototypeGenomeMetadata <- c(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:47:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L47) *style:* **Variable or function name should be snake_case.**
```r
.genomeMetadata <- function(object) {
^~~~~~~~~~~~~~~
```
[R/internal.R:49:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L49) *style:* **Variable or function name should be snake_case.**
```r
    prototypeMetadata <- .prototypeGenomeMetadata %>%
    ^~~~~~~~~~~~~~~~~
```
[R/internal.R:54:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L54) *style:* **Variable or function name should be snake_case.**
```r
.hasGenomeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~
```
[R/internal.R:55:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L55) *warning:* **no visible binding for global variable ‘genomeMetadataNames’**
```r
    all(genomeMetadataNames %in% names(metadata(object)))
        ^~~~~~~~~~~~~~~~~~~
```
[R/internal.R:55:40:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L55) *warning:* **no visible global function definition for ‘metadata’**
```r
    all(genomeMetadataNames %in% names(metadata(object)))
                                       ^~~~~~~~
```
[R/internal.R:58:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L58) *style:* **Variable or function name should be snake_case.**
```r
.assertHasGenomeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:65:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/internal.R#L65) *warning:* **no visible global function definition for ‘.assertHasPrototypeMetadata’**
```r
    .assertHasPrototypeMetadata(object)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:13:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L13) *style:* **Variable or function name should be snake_case.**
```r
MGI2Ensembl <- function() {
^~~~~~~~~~~
```
[R/MGI2Ensembl.R:14:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L14) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(has_internet())
    ^~~~~~~~~~~
```
[R/MGI2Ensembl.R:14:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L14) *warning:* **no visible global function definition for ‘has_internet’**
```r
    assert_that(has_internet())
                ^~~~~~~~~~~~
```
[R/MGI2Ensembl.R:17:27:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L17) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
        file <- file.path(basejumpCacheURL, "mgi.rpt.gz")
                          ^~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:19:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L19) *warning:* **no visible binding for global variable ‘.mgiURL’**
```r
        file <- .mgiURL
                ^~~~~~~
```
[R/MGI2Ensembl.R:37:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L37) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data) <- .prototypeMetadata
    ^~~~~~~~
```
[R/MGI2Ensembl.R:37:23:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L37) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
    metadata(data) <- .prototypeMetadata
                      ^~~~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:44:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/MGI2Ensembl.R#L44) *style:* **Variable or function name should be snake_case.**
```r
.mgiURL <- paste(
^~~~~~~
```
[R/PANTHER.R:23:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L23) *style:* **Variable or function name should be snake_case.**
```r
.pantherMappings <- c(
^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:32:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L32) *style:* **Variable or function name should be snake_case.**
```r
.splitTerms <- function(vec, progress = FALSE) {
^~~~~~~~~~~
```
[R/PANTHER.R:35:19:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L35) *warning:* **no visible binding for global variable ‘pblapply’, Did you mean 'lapply'?**
```r
        lapply <- pblapply
                  ^~~~~~~~
```
[R/PANTHER.R:58:25:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L58) *warning:* **no visible global function definition for ‘HGNC2Ensembl’**
```r
        hgnc2ensembl <- HGNC2Ensembl()
                        ^~~~~~~~~~~~
```
[R/PANTHER.R:91:24:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L91) *warning:* **no visible global function definition for ‘MGI2Ensembl’**
```r
        mgi2ensembl <- MGI2Ensembl()
                       ^~~~~~~~~~~
```
[R/PANTHER.R:122:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘mutate’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
        ^~~~~~
```
[R/PANTHER.R:122:31:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘str_extract’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
                              ^~~~~~~~~~~
```
[R/PANTHER.R:122:45:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
                                            ^~~
```
[R/PANTHER.R:129:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘mutate’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
        ^~~~~~
```
[R/PANTHER.R:129:31:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘str_extract’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
                              ^~~~~~~~~~~
```
[R/PANTHER.R:129:45:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
                                            ^~~
```
[R/PANTHER.R:142:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L142) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(has_internet())
    ^~~~~~~~~~~
```
[R/PANTHER.R:142:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L142) *warning:* **no visible global function definition for ‘has_internet’**
```r
    assert_that(has_internet())
                ^~~~~~~~~~~~
```
[R/PANTHER.R:147:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L147) *style:* **Variable or function name should be snake_case.**
```r
    pantherName <-  .pantherMappings[[organism]]
    ^~~~~~~~~~~
```
[R/PANTHER.R:147:21:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L147) *warning:* **no visible binding for global variable ‘.pantherMappings’**
```r
    pantherName <-  .pantherMappings[[organism]]
                    ^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:148:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L148) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(pantherName)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:152:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L152) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(release)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:153:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L153) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(progress)
    ^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:180:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L180) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(file)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:211:37:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L211) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
    fun <- get(paste("", "PANTHER", camel(organism), sep = "."))
                                    ^~~~~
```
[R/PANTHER.R:212:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L212) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(fun)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:214:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L214) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
    assert_has_rows(data)
    ^~~~~~~~~~~~~~~
```
[R/PANTHER.R:226:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L226) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(data[["geneID"]])
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:246:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L246) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data) <- .prototypeMetadata
    ^~~~~~~~
```
[R/PANTHER.R:246:23:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L246) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
    metadata(data) <- .prototypeMetadata
                      ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:247:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L247) *warning:* **no visible global function definition for ‘metadata’**
```r
    metadata(data)[["organism"]] <- organism
    ^~~~~~~~
```
[R/PANTHER.R:247:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L247) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data)[["organism"]] <- organism
    ^~~~~~~~
```
[R/PANTHER.R:248:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L248) *warning:* **no visible global function definition for ‘metadata’**
```r
    metadata(data)[["release"]] <- release
    ^~~~~~~~
```
[R/PANTHER.R:248:5:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/PANTHER.R#L248) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data)[["release"]] <- release
    ^~~~~~~~
```
[R/show-methods.R:27:1:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L27) *style:* **Variable or function name should be snake_case.**
```r
.showHeader <- function(object) {
^~~~~~~~~~~
```
[R/show-methods.R:28:30:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L28) *warning:* **no visible global function definition for ‘metadata’**
```r
    cat(paste(class(object), metadata(object)[["version"]]), sep = "\n")
                             ^~~~~~~~
```
[R/show-methods.R:35:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L35) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:45:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L45) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:84:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L84) *warning:* **no visible global function definition for ‘show.DataFrame’**
```r
        show.DataFrame(object)
        ^~~~~~~~~~~~~~
```
[R/show-methods.R:128:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L128) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:151:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/show-methods.R#L151) *warning:* **no visible global function definition for ‘show.DataFrame’**
```r
        show.DataFrame(object)
        ^~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:17:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L17) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:34:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L34) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .genomeMetadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:34:27:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L34) *warning:* **no visible global function definition for ‘.genomeMetadata’**
```r
        metadata(data) <- .genomeMetadata(object)
                          ^~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:56:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L56) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:56:9:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L56) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:75:19:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L75) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:76:17:](https://github.com/steinbaugh/basejump.classes/blob/c9f0dacf5e0af67b201128882a91649b8237201f/R/Tx2Gene-methods.R#L76) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```


Created multidev environment [d8-digital-stlawu#ci-338](https://dashboard.pantheon.io/sites/9f185cec-9c0b-4fcb-972f-9a5f2f6ed252#ci-338).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-338-d8-digital-stlawu.pantheonsite.io/)


I added a test screen where one can get click the red text and get Makank's names and skills from the database. This info will be printed on the console.
In order for this to work you must have postman and change url within test.js to your ip address. To run this, you have to run postman and expo concurrently. W/in the testscreen I need help adding json info just mentors names and skills in an array. Eventually, we will add this code to the matching algo so the algo can then loop through the array and find proper matches


Can specify as many modification types as necessary. E.g. ['modificationSpecificPeptides.txt', 'Acetylation (K)Sites.txt', 'Oxidation (M)Sites.txt',...].

'normalisation_peptides' argument is specified as whatever 'modificationSpecificPeptides.txt' is called.


Should be something like:

{$wgScriptPath}/index.php?target={$row->rl_externallink}&namespace=&title=Special%3ALinkSearch


Link video test :
https://drive.google.com/drive/folders/1LOLO0f0M1mI0Aj9d336lyGpBDZif4op1?usp=sharing


It seems scrolloff is set twice, as both "scrolloff" and "so"?


Yeah, we said that.

Maybe its not a fact, but you should consider it.


The `if`/`find_if` is used to check if the device's display name is already in the device list. If it isn't, it breaks the loop and uses the name. If it is, it increments `count` and tries again, appending ` #n` to make it distinct. So for example, if there's two devices with the display name `USB Audio Device Analog Stereo`, the second one will be given the name `USB Audio Device Analog Stereo #2`, and if there happens to be a third one, it gets called `USB Audio Device Analog Stereo #3`, etc.

It may be possible to simplify the loop to make it more clear and succinct, now that it's proper C++ types and algorithms.


save in base folder rather than in subfolder


There's no way you could have predicted this, but my work flow was to first use ```dg/MySQL-dump``` to dump the structure of my database into a file and then use a simple ```>>``` to append some more ```INSERT INTO ```, thus creating a mock-db used by my test suite.

It took me quite a while to find out why my test suite only found a database with empty tables.


yes i did


Hi, maybe consider a v# higher than 1.5.4b, eg 1.5.5?
Because anyone having installed the test version (https://github.com/I-A-C/script.module.lambdascrapers) won't get the new version through the repo automatically.


Removed tsp. Updated epass.


Successfully aliased the URL <https://alphabet-keys-zxtyqlruti.now.sh> to the following alias.

* https://alphabet-keys.now.sh


[R/EggNOG.R:10:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L10) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(has_internet())
        ^~~~~~~~~~~
```
[R/EggNOG.R:10:21:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L10) *warning:* **no visible global function definition for ‘has_internet’**
```r
        assert_that(has_internet())
                    ^~~~~~~~~~~~
```
[R/EggNOG.R:12:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L12) *style:* **Variable or function name should be snake_case.**
```r
            categoriesFile <- file.path(basejumpCacheURL, "cog.txt")
            ^~~~~~~~~~~~~~
```
[R/EggNOG.R:12:41:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L12) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            categoriesFile <- file.path(basejumpCacheURL, "cog.txt")
                                        ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:13:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L13) *style:* **Variable or function name should be snake_case.**
```r
            eunogFile <- file.path(basejumpCacheURL, "eunog.tsv.gz")
            ^~~~~~~~~
```
[R/EggNOG.R:13:36:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L13) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            eunogFile <- file.path(basejumpCacheURL, "eunog.tsv.gz")
                                   ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:14:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L14) *style:* **Variable or function name should be snake_case.**
```r
            nogFile <- file.path(basejumpCacheURL, "nog.tsv.gz")
            ^~~~~~~
```
[R/EggNOG.R:14:34:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L14) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            nogFile <- file.path(basejumpCacheURL, "nog.tsv.gz")
                                 ^~~~~~~~~~~~~~~~
```
[R/EggNOG.R:22:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L22) *style:* **Variable or function name should be snake_case.**
```r
            categoriesFile <- paste(
            ^~~~~~~~~~~~~~
```
[R/EggNOG.R:27:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L27) *style:* **Variable or function name should be snake_case.**
```r
            eunogFile <- paste(
            ^~~~~~~~~
```
[R/EggNOG.R:34:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L34) *style:* **Variable or function name should be snake_case.**
```r
            nogFile <- paste(
            ^~~~~~~
```
[R/EggNOG.R:42:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L42) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(categoriesFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:43:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L43) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(eunogFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:44:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L44) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
        assert_is_a_string(nogFile)
        ^~~~~~~~~~~~~~~~~~
```
[R/EggNOG.R:98:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L98) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .prototypeMetadata
        ^~~~~~~~
```
[R/EggNOG.R:98:27:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/EggNOG.R#L98) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
        metadata(data) <- .prototypeMetadata
                          ^~~~~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:24:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L24) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:38:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L38) *warning:* **no visible global function definition for ‘expand’**
```r
        data <- expand(data)
                ^~~~~~
```
[R/Ensembl2Entrez.R:42:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L42) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(!any(duplicated(unmapped)))
        ^~~~~~~~~~~
```
[R/Ensembl2Entrez.R:60:13:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L60) *warning:* **no visible global function definition for ‘assert_is_list’**
```r
            assert_is_list(entrez)
            ^~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:82:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L82) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:82:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L82) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:83:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L83) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:83:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L83) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:92:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L92) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:92:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L92) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Ensembl2Entrez.R:107:19:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L107) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Ensembl2Entrez.R:108:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Ensembl2Entrez.R#L108) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```
[R/Gene2Symbol-methods.R:27:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L27) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:69:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L69) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .genomeMetadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:69:27:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L69) *warning:* **no visible global function definition for ‘.genomeMetadata’**
```r
        metadata(data) <- .genomeMetadata(object)
                          ^~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:70:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L70) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:70:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L70) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data)[["format"]] <- format
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:91:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L91) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:91:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L91) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Gene2Symbol-methods.R:117:19:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L117) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Gene2Symbol-methods.R:118:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Gene2Symbol-methods.R#L118) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```
[R/HGNC2Ensembl.R:10:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L10) *warning:* **no visible global function definition for ‘assert_that’**
```r
        assert_that(has_internet())
        ^~~~~~~~~~~
```
[R/HGNC2Ensembl.R:10:21:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L10) *warning:* **no visible global function definition for ‘has_internet’**
```r
        assert_that(has_internet())
                    ^~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:13:31:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L13) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
            file <- file.path(basejumpCacheURL, "hgnc.txt.gz")
                              ^~~~~~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:15:21:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L15) *warning:* **no visible binding for global variable ‘.hgncURL’**
```r
            file <- .hgncURL
                    ^~~~~~~~
```
[R/HGNC2Ensembl.R:25:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L25) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
        data <- camel(data)
                ^~~~~
```
[R/HGNC2Ensembl.R:32:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L32) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .prototypeMetadata
        ^~~~~~~~
```
[R/HGNC2Ensembl.R:32:27:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L32) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
        metadata(data) <- .prototypeMetadata
                          ^~~~~~~~~~~~~~~~~~
```
[R/HGNC2Ensembl.R:39:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/HGNC2Ensembl.R#L39) *style:* **Variable or function name should be snake_case.**
```r
.hgncURL <- paste(
^~~~~~~~
```
[R/internal.R:16:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L16) *style:* **Variable or function name should be snake_case.**
```r
.prototypeMetadata <- list(
^~~~~~~~~~~~~~~~~~
```
[R/internal.R:21:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L21) *style:* **Variable or function name should be snake_case.**
```r
.hasPrototypeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:28:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L28) *style:* **Variable or function name should be snake_case.**
```r
.assertHasPrototypeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:38:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L38) *style:* **Variable or function name should be snake_case.**
```r
.prototypeGenomeMetadata <- c(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:47:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L47) *style:* **Variable or function name should be snake_case.**
```r
.genomeMetadata <- function(object) {
^~~~~~~~~~~~~~~
```
[R/internal.R:49:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L49) *style:* **Variable or function name should be snake_case.**
```r
    prototypeMetadata <- .prototypeGenomeMetadata %>%
    ^~~~~~~~~~~~~~~~~
```
[R/internal.R:54:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L54) *style:* **Variable or function name should be snake_case.**
```r
.hasGenomeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~
```
[R/internal.R:55:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L55) *warning:* **no visible binding for global variable ‘genomeMetadataNames’**
```r
    all(genomeMetadataNames %in% names(metadata(object)))
        ^~~~~~~~~~~~~~~~~~~
```
[R/internal.R:55:40:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L55) *warning:* **no visible global function definition for ‘metadata’**
```r
    all(genomeMetadataNames %in% names(metadata(object)))
                                       ^~~~~~~~
```
[R/internal.R:58:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L58) *style:* **Variable or function name should be snake_case.**
```r
.assertHasGenomeMetadata <- function(object) {
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/internal.R:65:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/internal.R#L65) *warning:* **no visible global function definition for ‘.assertHasPrototypeMetadata’**
```r
    .assertHasPrototypeMetadata(object)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:13:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L13) *style:* **Variable or function name should be snake_case.**
```r
MGI2Ensembl <- function() {
^~~~~~~~~~~
```
[R/MGI2Ensembl.R:14:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L14) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(has_internet())
    ^~~~~~~~~~~
```
[R/MGI2Ensembl.R:14:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L14) *warning:* **no visible global function definition for ‘has_internet’**
```r
    assert_that(has_internet())
                ^~~~~~~~~~~~
```
[R/MGI2Ensembl.R:17:27:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L17) *warning:* **no visible binding for global variable ‘basejumpCacheURL’**
```r
        file <- file.path(basejumpCacheURL, "mgi.rpt.gz")
                          ^~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:19:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L19) *warning:* **no visible binding for global variable ‘.mgiURL’**
```r
        file <- .mgiURL
                ^~~~~~~
```
[R/MGI2Ensembl.R:37:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L37) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data) <- .prototypeMetadata
    ^~~~~~~~
```
[R/MGI2Ensembl.R:37:23:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L37) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
    metadata(data) <- .prototypeMetadata
                      ^~~~~~~~~~~~~~~~~~
```
[R/MGI2Ensembl.R:44:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/MGI2Ensembl.R#L44) *style:* **Variable or function name should be snake_case.**
```r
.mgiURL <- paste(
^~~~~~~
```
[R/PANTHER.R:23:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L23) *style:* **Variable or function name should be snake_case.**
```r
.pantherMappings <- c(
^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:32:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L32) *style:* **Variable or function name should be snake_case.**
```r
.splitTerms <- function(vec, progress = FALSE) {
^~~~~~~~~~~
```
[R/PANTHER.R:35:19:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L35) *warning:* **no visible binding for global variable ‘pblapply’, Did you mean 'lapply'?**
```r
        lapply <- pblapply
                  ^~~~~~~~
```
[R/PANTHER.R:58:25:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L58) *warning:* **no visible global function definition for ‘HGNC2Ensembl’**
```r
        hgnc2ensembl <- HGNC2Ensembl()
                        ^~~~~~~~~~~~
```
[R/PANTHER.R:91:24:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L91) *warning:* **no visible global function definition for ‘MGI2Ensembl’**
```r
        mgi2ensembl <- MGI2Ensembl()
                       ^~~~~~~~~~~
```
[R/PANTHER.R:122:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘mutate’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
        ^~~~~~
```
[R/PANTHER.R:122:31:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘str_extract’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
                              ^~~~~~~~~~~
```
[R/PANTHER.R:122:45:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L122) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "FBgn\\d{7}$"))
                                            ^~~
```
[R/PANTHER.R:129:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘mutate’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
        ^~~~~~
```
[R/PANTHER.R:129:31:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘str_extract’**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
                              ^~~~~~~~~~~
```
[R/PANTHER.R:129:45:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L129) *warning:* **no visible global function definition for ‘sym’, Did you mean 'sum'?**
```r
        mutate(data, geneID = str_extract(!!sym("keys"), "WBGene\\d{8}$"))
                                            ^~~
```
[R/PANTHER.R:142:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L142) *warning:* **no visible global function definition for ‘assert_that’**
```r
    assert_that(has_internet())
    ^~~~~~~~~~~
```
[R/PANTHER.R:142:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L142) *warning:* **no visible global function definition for ‘has_internet’**
```r
    assert_that(has_internet())
                ^~~~~~~~~~~~
```
[R/PANTHER.R:147:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L147) *style:* **Variable or function name should be snake_case.**
```r
    pantherName <-  .pantherMappings[[organism]]
    ^~~~~~~~~~~
```
[R/PANTHER.R:147:21:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L147) *warning:* **no visible binding for global variable ‘.pantherMappings’**
```r
    pantherName <-  .pantherMappings[[organism]]
                    ^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:148:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L148) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(pantherName)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:152:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L152) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(release)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:153:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L153) *warning:* **no visible global function definition for ‘assert_is_a_bool’**
```r
    assert_is_a_bool(progress)
    ^~~~~~~~~~~~~~~~
```
[R/PANTHER.R:180:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L180) *warning:* **no visible global function definition for ‘assert_is_a_string’**
```r
    assert_is_a_string(file)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:211:37:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L211) *warning:* **no visible global function definition for ‘camel’, Did you mean 'call'?**
```r
    fun <- get(paste("", "PANTHER", camel(organism), sep = "."))
                                    ^~~~~
```
[R/PANTHER.R:212:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L212) *warning:* **no visible global function definition for ‘assert_is_function’**
```r
    assert_is_function(fun)
    ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:214:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L214) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
    assert_has_rows(data)
    ^~~~~~~~~~~~~~~
```
[R/PANTHER.R:226:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L226) *warning:* **no visible global function definition for ‘assert_has_no_duplicates’**
```r
    assert_has_no_duplicates(data[["geneID"]])
    ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:246:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L246) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data) <- .prototypeMetadata
    ^~~~~~~~
```
[R/PANTHER.R:246:23:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L246) *warning:* **no visible binding for global variable ‘.prototypeMetadata’**
```r
    metadata(data) <- .prototypeMetadata
                      ^~~~~~~~~~~~~~~~~~
```
[R/PANTHER.R:247:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L247) *warning:* **no visible global function definition for ‘metadata’**
```r
    metadata(data)[["organism"]] <- organism
    ^~~~~~~~
```
[R/PANTHER.R:247:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L247) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data)[["organism"]] <- organism
    ^~~~~~~~
```
[R/PANTHER.R:248:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L248) *warning:* **no visible global function definition for ‘metadata’**
```r
    metadata(data)[["release"]] <- release
    ^~~~~~~~
```
[R/PANTHER.R:248:5:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/PANTHER.R#L248) *warning:* **no visible global function definition for ‘metadata<-’**
```r
    metadata(data)[["release"]] <- release
    ^~~~~~~~
```
[R/show-methods.R:27:1:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L27) *style:* **Variable or function name should be snake_case.**
```r
.showHeader <- function(object) {
^~~~~~~~~~~
```
[R/show-methods.R:28:30:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L28) *warning:* **no visible global function definition for ‘metadata’**
```r
    cat(paste(class(object), metadata(object)[["version"]]), sep = "\n")
                             ^~~~~~~~
```
[R/show-methods.R:35:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L35) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:45:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L45) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:84:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L84) *warning:* **no visible global function definition for ‘show.DataFrame’**
```r
        show.DataFrame(object)
        ^~~~~~~~~~~~~~
```
[R/show-methods.R:128:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L128) *warning:* **no visible global function definition for ‘.showHeader’**
```r
        .showHeader(object)
        ^~~~~~~~~~~
```
[R/show-methods.R:151:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/show-methods.R#L151) *warning:* **no visible global function definition for ‘show.DataFrame’**
```r
        show.DataFrame(object)
        ^~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:17:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L17) *warning:* **no visible global function definition for ‘assert_has_rows’**
```r
        assert_has_rows(object)
        ^~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:34:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L34) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- .genomeMetadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:34:27:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L34) *warning:* **no visible global function definition for ‘.genomeMetadata’**
```r
        metadata(data) <- .genomeMetadata(object)
                          ^~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:56:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L56) *warning:* **no visible global function definition for ‘metadata<-’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:56:9:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L56) *warning:* **no visible global function definition for ‘metadata’**
```r
        metadata(data) <- metadata(object)
        ^~~~~~~~
```
[R/Tx2Gene-methods.R:75:19:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L75) *warning:* **no visible global function definition for ‘as.SummarizedExperiment’**
```r
        object <- as.SummarizedExperiment(object)
                  ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/Tx2Gene-methods.R:76:17:](https://github.com/steinbaugh/basejump.classes/blob/ef310157abe9f843a4b3d7700bf67b1b459f85ad/R/Tx2Gene-methods.R#L76) *warning:* **no visible global function definition for ‘rowData’**
```r
        data <- rowData(object)
                ^~~~~~~
```


Danke :D


@hestolz Falling back to ( ) in print statements might thrown an error on machines. Correct me if i'm wrong here.


Why the "expires at" field got removed? Kindly help how to refresh any expired access token.


@webfolderio Tests on Youtrack databases showed that this initial size is optimal in order to minimize memory traffic.


can I do the changes mentioned in the comments in my technologies?


issue #59


Created multidev environment [rad-new#pr-46](https://dashboard.pantheon.io/sites/a0f7976a-d5a5-49c8-b64a-9c7ca3ce2c18#pr-46).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-46-rad-new.pantheonsite.io/)