[R/DAISIE_area_params.R:32:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
#' @param proportional_peak_t value from 0 to 1 indicating where in the island's history the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:32:93:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L32) *style:* **Trailing whitespace is superfluous.**
```r
#' @param proportional_peak_t value from 0 to 1 indicating where in the island's history the
                                                                                ^
```
[R/DAISIE_area_params.R:37:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L37) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list of numerical values containing area parameters for island ontogeny
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:37:83:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L37) *style:* **Trailing whitespace is superfluous.**
```r
#' @return list of numerical values containing area parameters for island ontogeny
                                                                                ^
```
[R/DAISIE_area_params.R:41:13:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L41) *style:* **Trailing whitespace is superfluous.**
```r
#' @examples
            ^
```
[R/DAISIE_area_params.R:60:28:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_area_params.R#L60) *style:* **Trailing whitespace is superfluous.**
```r
  list(max_area = max_area,
                           ^
```
[R/DAISIE_create_island.R:5:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L5) *style:* **Lines should not be more than 80 characters.**
```r
#' @param island_spec matrix with species on island (state of system at each time point)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:7:75:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#' @param keep_final_state logical indicating if final state of simulation
                                                                          ^
```
[R/DAISIE_create_island.R:10:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L10) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list with the island information, composed stt table, branching times of extant
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L12) *style:* **Variable or function name should be snake_case.**
```r
DAISIE_create_island <- function(stt_table,
^~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:44:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
DAISIE_create_island <- function(stt_table,
                                           ^
```
[R/DAISIE_create_island.R:13:44:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L13) *style:* **Trailing whitespace is superfluous.**
```r
                                 totaltime,
                                           ^
```
[R/DAISIE_create_island.R:14:46:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L14) *style:* **Trailing whitespace is superfluous.**
```r
                                 island_spec,
                                             ^
```
[R/DAISIE_create_island.R:17:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L17) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:18:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L18) *style:* **Lines should not be more than 80 characters.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:18:104:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L18) *style:* **Trailing whitespace is superfluous.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
                                                                                ^
```
[R/DAISIE_create_island.R:19:27:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L19) *style:* **Commas should always have a space after.**
```r
  if (length(island_spec[,1]) == 0) {
                          ^
```
[R/DAISIE_create_island.R:20:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L20) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:21:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L21) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:33:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L33) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:34:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L34) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:35:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L35) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:37:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L37) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:45:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L45) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:47:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L47) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:49:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "branching time (BP)"] <- totaltime - as.numeric(island_spec[, "branching time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:50:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "Colonisation time (BP)"] <- totaltime - as.numeric(island_spec[, "Colonisation time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:51:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L51) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:58:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L58) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:60:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L60) *style:* **Lines should not be more than 80 characters.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:60:65:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L60) *style:* **Only use double-quotes.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
                                                                ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:61:60:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L61) *style:* **Trailing whitespace is superfluous.**
```r
      number_colonists_present <- length(colonists_present)
                                                           ^
```
[R/DAISIE_create_island.R:62:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L62) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:63:35:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L63) *style:* **Trailing whitespace is superfluous.**
```r
      island_clades_info <- list()
                                  ^~
```
[R/DAISIE_create_island.R:65:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:65:58:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L65) *style:* **Only use double-quotes.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                         ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:65:104:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L65) *style:* **Commas should always have a space after.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:65:105:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L65) *style:* **Trailing whitespace is superfluous.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:66:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L66) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:67:37:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L67) *style:* **Only use double-quotes.**
```r
        if (class(subset_island) != 'matrix') {
                                    ^~~~~~~~
```
[R/DAISIE_create_island.R:71:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L71) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:73:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
                                                      island_spec = subset_island,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:75:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L75) *style:* **Lines should not be more than 80 characters.**
```r
                                                      keep_final_state = keep_final_state)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:81:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L81) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:84:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L84) *style:* **Lines should not be more than 80 characters.**
```r
                       taxon_list = island_clades_info, island_spec = island_spec)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:88:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_create_island.R#L88) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_data.R:2:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:7:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
#' #' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:12:34:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
#' the following elements.\cr \cr
                                 ^
```
[R/DAISIE_data.R:47:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:52:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:92:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L92) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in table
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:96:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A table containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:103:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic: for cases where both island and non-island populations of the species have been sampled) \cr
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:104:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic_MaxAge: for cases where island population of the species has not
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:124:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L124) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in RAW format simulated with the ML parameters of the CR model
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:125:27:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L125) *style:* **Trailing whitespace is superfluous.**
```r
#' for the Galapagos data.
                          ^
```
[R/DAISIE_data.R:127:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:158:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L158) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in DAISIE format simulated with the ML parameters of the CR
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:161:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L161) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:165:42:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
#' \code{$island_age} - the island age\cr
                                         ^
```
[R/DAISIE_data.R:197:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L197) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:247:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L247) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:256:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L256) *style:* **Lines should not be more than 80 characters.**
```r
#' The following elements of the list each contains information on a single colonist lineage
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:270:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L270) *style:* **Lines should not be more than 80 characters.**
```r
#' #' \code{$missing_species} - number of island species that were not sampled for
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:277:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_data.R#L277) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:2:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L2) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:7:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:10:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L10) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:86:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L86) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^~
```
[R/DAISIE_dataprep.R:87:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L87) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:88:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L88) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:89:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L89) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:90:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
#' ### Create Galapagos data object where all taxa have the same macroevolutionary process
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:91:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L91) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:98:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L98) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:100:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L100) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:100:82:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L100) *style:* **Trailing whitespace is superfluous.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
                                                                                ^
```
[R/DAISIE_dataprep.R:101:79:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L101) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:104:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L104) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:113:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L113) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:114:80:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L114) *style:* **Trailing whitespace is superfluous.**
```r
#' ### Create Galapagos data object with a distinct macroevolutionary processes
                                                                               ^
```
[R/DAISIE_dataprep.R:115:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L115) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:116:79:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L116) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:117:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
#' # (Darwin's finches). Set fraction of potential colonists of type 2 to be 0.163.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:118:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L118) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:128:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L128) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Lines should not be more than 80 characters.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Variable or function name should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:17:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Use <-, not =, for assignment.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                ^
```
[R/DAISIE_dataprep.R:130:38:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                     ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Variable or function name should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:51:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                  ^
```
[R/DAISIE_dataprep.R:130:74:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                         ^
```
[R/DAISIE_dataprep.R:130:131:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                                ^
```
[R/DAISIE_dataprep.R:131:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L131) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/DAISIE_dataprep.R:132:24:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L132) *style:* **Use <-, not =, for assignment.**
```r
  number_colonisations = nrow(datatable)
                       ^
```
[R/DAISIE_dataprep.R:133:12:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L133) *style:* **Use <-, not =, for assignment.**
```r
  datalist = list()
           ^
```
[R/DAISIE_dataprep.R:134:13:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L134) *style:* **Variable or function name should be snake_case.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
            ^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:134:28:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L134) *style:* **Put spaces around all infix operators.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
                          ~^~~
```
[R/DAISIE_dataprep.R:135:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L135) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_dataprep.R:136:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L136) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 1)
    ^
```
[R/DAISIE_dataprep.R:137:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L137) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:138:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:138:19:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                  ^
```
[R/DAISIE_dataprep.R:138:36:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                  ~^~
```
[R/DAISIE_dataprep.R:138:48:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Commas should always have a space after.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                               ^
```
[R/DAISIE_dataprep.R:138:59:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                         ~^~
```
[R/DAISIE_dataprep.R:138:60:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L138) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                           ^
```
[R/DAISIE_dataprep.R:140:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L140) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 2)
    ^
```
[R/DAISIE_dataprep.R:141:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L141) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:142:32:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L142) *style:* **Use <-, not =, for assignment.**
```r
    number_type2_colonisations = length(list_type2_clades)
                               ^
```
[R/DAISIE_dataprep.R:143:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:143:32:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L143) *style:* **Use <-, not =, for assignment.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
                               ^
```
[R/DAISIE_dataprep.R:145:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L145) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:146:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L146) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:146:25:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L146) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:146:41:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L146) *style:* **Put spaces around all infix operators.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:147:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L147) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:147:25:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L147) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:147:41:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L147) *style:* **Put spaces around all infix operators.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:149:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L149) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:149:25:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L149) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:150:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L150) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:150:25:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L150) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:152:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L152) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:152:19:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L152) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
                  ^
```
[R/DAISIE_dataprep.R:155:3:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L155) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:156:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:156:23:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                      ^
```
[R/DAISIE_dataprep.R:156:71:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                      ^
```
[R/DAISIE_dataprep.R:156:86:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:107:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:117:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:147:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:157:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L157) *style:* **Lines should not be more than 80 characters.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:157:14:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L157) *style:* **Use <-, not =, for assignment.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
             ^
```
[R/DAISIE_dataprep.R:157:77:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                            ^
```
[R/DAISIE_dataprep.R:157:97:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                                ^
```
[R/DAISIE_dataprep.R:158:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L158) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:159:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Lines should not be more than 80 characters.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:7:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
      ^
```
[R/DAISIE_dataprep.R:159:21:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                   ~^~
```
[R/DAISIE_dataprep.R:159:33:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                ^
```
[R/DAISIE_dataprep.R:159:46:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                             ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:70:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                     ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~
```
[R/DAISIE_dataprep.R:159:92:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:117:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:160:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:163:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ~^~
```
[R/DAISIE_dataprep.R:159:164:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~
```
[R/DAISIE_dataprep.R:159:168:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L159) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:160:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L160) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:161:7:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L161) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) == 1)
      ^
```
[R/DAISIE_dataprep.R:161:30:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L161) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) == 1)
                             ^
```
[R/DAISIE_dataprep.R:162:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L162) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:163:1:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L163) *style:* **Lines should not be more than 80 characters.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:163:41:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L163) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                        ^
```
[R/DAISIE_dataprep.R:163:56:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                       ^
```
[R/DAISIE_dataprep.R:163:69:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                                    ^
```
[R/DAISIE_dataprep.R:165:7:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L165) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) > 1)
      ^
```
[R/DAISIE_dataprep.R:165:29:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) > 1)
                            ^~
```
[R/DAISIE_dataprep.R:166:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L166) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:167:41:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L167) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                        ^
```
[R/DAISIE_dataprep.R:167:56:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L167) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                                       ^
```
[R/DAISIE_dataprep.R:169:7:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L169) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
      ^
```
[R/DAISIE_dataprep.R:169:20:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L169) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
                   ^
```
[R/DAISIE_dataprep.R:170:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L170) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:171:30:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L171) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 1
                             ^
```
[R/DAISIE_dataprep.R:173:7:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L173) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Endemic")
      ^
```
[R/DAISIE_dataprep.R:173:20:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L173) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Endemic")
                   ^
```
[R/DAISIE_dataprep.R:174:5:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L174) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:175:30:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L175) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 2
                             ^
```
[R/DAISIE_dataprep.R:176:9:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L176) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      if(max(the_brts)>island_age){
        ^
```
[R/DAISIE_dataprep.R:176:23:](https://github.com/rsetienne/DAISIE/blob/f18109d351e752b42803f91671bd5966f4dc0bf2/R/DAISIE_dataprep.R#L176) *style:* **Put spaces around all infix operators.**
```r
      if(max(the_brts)>island_age){
                     ~^~
```


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---|---|---
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|Deployment project |
----|
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Not really - coming to think of it, the way it's been done in the commit you reference is a bit redundant.
All of the following would be valid:
```c++
return signextend<int64_t, 32>(static_cast<int>(*this)) // Utilize int() operator which sign extends from n
return static_cast<int64_t>(static_cast<int>(*this)); // Explicitly cast to int64_t
return static_cast<int>(*this); // Implicitely cast to int64_t in the return statement
return signextend<int64_t, n>(m_value); // Signextend base value from n
```
I'll push a commit changing it to `return signextend<int64_t, n>(m_value);`, which should have the least overhead.


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[Click](https://www.deepcode.ai/app/gh/Manu-shukla/PySyft/2e37a9f5529c8de623ea16e62b09ff44b56ab0b2/_/dashboard/) to see more details.


DeepCode has been upgraded! BotFramework-Emulator has been audited again to find new bugs and defects.

There are 5 new important issues, 2 new warnings and 48 new info reports.

[Click](https://www.deepcode.ai/app/gh/jaafarmelhem/BotFramework-Emulator/85b220825625068b79245f7df2a6ed811ba7be10/_/dashboard/) to see more details.


DeepCode has been upgraded! odoo has been audited again to find new bugs and defects.

There are 22 new important issues, 39 new warnings and 257 new info reports.

[Click](https://www.deepcode.ai/app/gh/kevin808/odoo/c54d83ebd5c0ebf195c5e4403c286a3d85cc7e0b/_/dashboard/) to see more details.


DeepCode has been upgraded! develop has been audited again to find new bugs and defects.

There are 1 new important issue and 18 new info reports.

[Click](https://www.deepcode.ai/app/gh/kevin808/develop/ee308adc0ebe2d2cf11771edaade1f832ab70261/_/dashboard/) to see more details.


DeepCode has been upgraded! LycheeOS has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! stateofai has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! startup-evaluator-bot has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! PlayPin_Distributed_Image_Aggregator has been audited again to find new bugs and defects.

There are 5 new info reports.

[Click](https://www.deepcode.ai/app/gh/isacandrei/PlayPin_Distributed_Image_Aggregator/de447bb2b8bf4845d399ab4a0669f2e336c5a4c6/_/dashboard/) to see more details.


DeepCode has been upgraded! MZS has been audited again to find new bugs and defects.

There are 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/Geogre177/MZS/1fb97e2e41c92caed977aea660091b6e8dc13d57/_/dashboard/) to see more details.


Actually, just took a quick look. :-)  If we're synthesizing a MM press, do we also need to synthesize a MM release when LM is released?


DeepCode has been upgraded! Zombie has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! app has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! Jedi-Master has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! Java has been audited again to find new bugs and defects.

There are 1 new important issue, 4 new warnings and 32 new info reports.

[Click](https://www.deepcode.ai/app/gh/Geogre177/Java/ad0be342995cf8d256b64a98fc677880e4491dd6/_/dashboard/) to see more details.


DeepCode has been upgraded! Obj-file-loader-and-visualizer has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! php-exception-probe has been audited again to find new bugs and defects.

There are no new issues.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


DeepCode has been upgraded! MyAndroidDemos has been audited again to find new bugs and defects.

There are 2 new warnings and 12 new info reports.

[Click](https://www.deepcode.ai/app/gh/jason2code/MyAndroidDemos/5ee05d1926ec83d91d755008ae0688bef451a307/_/dashboard/) to see more details.


DeepCode has been upgraded! MyBudget has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! testprodo has been audited again to find new bugs and defects.

There are 5 new info reports.

[Click](https://www.deepcode.ai/app/gh/garethdwyer/testprodo/231a0c3325d0058a837dd406f192e808cb65160f/_/dashboard/) to see more details.


Coding a fun quiz for Udacity students to interact with


Please make sure that only Active Staff's are sent a 200OK response. The Inactive Staff must be responded with Staff Inactive.


DeepCode has been upgraded! color has been audited again to find new bugs and defects.

There are 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/ROR77/color/2bb34d1600f8095e80ce0ffc1e21fa3a8986a286/_/dashboard/) to see more details.


DeepCode has been upgraded! hack-grand-forks has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! alambic has been audited again to find new bugs and defects.

There are 2 new info reports.

[Click](https://www.deepcode.ai/app/gh/borisbaldassari/alambic/50db2bd9f99e141b89f73ff37df6555e07438019/_/dashboard/) to see more details.


DeepCode has been upgraded! scava has been audited again to find new bugs and defects.

There are 2 new important issues, 22 new warnings and 132 new info reports.

[Click](https://www.deepcode.ai/app/gh/borisbaldassari/scava/bab966ef1551b22002816e3ec072db8f42b46b2c/_/dashboard/) to see more details.


DeepCode has been upgraded! timeline has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! names has been audited again to find new bugs and defects.

There are no new issues.


@telk5093 I didn't notice this at the time, but this won't work. Could you open a PR to fix it?


DeepCode has been upgraded! tides has been audited again to find new bugs and defects.

There are 2 new warnings and 7 new info reports.

[Click](https://www.deepcode.ai/app/gh/meule/tides/28cfa6b133f11e027fa85d0e09b3df2ecc7190aa/_/dashboard/) to see more details.


DeepCode has been upgraded! Tic-tac-toe-game has been audited again to find new bugs and defects.

There are 5 new info reports.

[Click](https://www.deepcode.ai/app/gh/ma364054/Tic-tac-toe-game/76d1e92258deb81c59c99c68b2183d5b50bf7349/_/dashboard/) to see more details.


DeepCode has been upgraded! errai has been audited again to find new bugs and defects.

There are 3 new important issues, 13 new warnings and 205 new info reports.

[Click](https://www.deepcode.ai/app/gh/riverwinddk/errai/1b6ffd37639a1c20a5bdedc0410ea82c55d1ac1b/_/dashboard/) to see more details.


do smething


Successfully aliased the URL <https://imagineadrian-on8obo2mg.now.sh> to the following aliases.

* https://imagineadrian.com
* https://imagineadrian-git-master.hadrianix.now.sh


Committed.


DeepCode has been upgraded! hebb_vectors has been audited again to find new bugs and defects.

There are 11 new info reports.

[Click](https://www.deepcode.ai/app/gh/teja5832/hebb_vectors/3e67ebc3b659abdf4c561b514be6db1343fbf999/_/dashboard/) to see more details.


DeepCode has been upgraded! Importance-of-Stochasticity-in-DropOut has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! useful-snippets has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! Measuring-Neural-Net-Robustness has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! external-sort has been audited again to find new bugs and defects.

There are 1 new important issue and 6 new info reports.

[Click](https://www.deepcode.ai/app/gh/teja5832/external-sort/1701723edb6b9d7d9303a196a7b00e1bafec1c54/_/dashboard/) to see more details.


DeepCode has been upgraded! latexdefs has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! teja5832.github.io has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! pytorch-cifar has been audited again to find new bugs and defects.

There are 7 new info reports.

[Click](https://www.deepcode.ai/app/gh/teja5832/pytorch-cifar/bf78d3b8b358c4be7a25f9f9438c842d837801fd/_/dashboard/) to see more details.


DeepCode has been upgraded! faceswap has been audited again to find new bugs and defects.

There are 25 new info reports.

[Click](https://www.deepcode.ai/app/gh/HorusPi/faceswap/1f9176362a9be620209b227bbfe8971361d4cc5d/_/dashboard/) to see more details.


There is no way of virus being in the archive. It's a direct build of Unity, not modified in any way. And as you can see, those are 2 not really popular antivirus products.


DeepCode has been upgraded! Object-detection has been audited again to find new bugs and defects.

There are 11 new info reports.

[Click](https://www.deepcode.ai/app/gh/HorusPi/Object-detection/6f365201c8855a49ebf6da21bbb77e3e8dc76918/_/dashboard/) to see more details.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


DeepCode has been upgraded! BicycleGAN has been audited again to find new bugs and defects.

There are 1 new warning and 17 new info reports.

[Click](https://www.deepcode.ai/app/gh/HorusPi/BicycleGAN/ad77de2112b939d00cf71ab0f17e84594deb9936/_/dashboard/) to see more details.


> Is this document available publicly?

It is not available publicly.

The Onboarding guide is the best and preferred entrypoint to Arcade, and anything not covered there is something we would like to improve upon. So if you have any questions or contributions, feel free to open an issue.


Separated chapters into individual documents


DeepCode has been upgraded! Learning-to-See-in-the-Dark has been audited again to find new bugs and defects.

There are 9 new info reports.

[Click](https://www.deepcode.ai/app/gh/HorusPi/Learning-to-See-in-the-Dark/5253c2cc066367986de17b9a3211be017ac517dc/_/dashboard/) to see more details.


DeepCode has been upgraded! scipio-erp has been audited again to find new bugs and defects.

There are 52 new important issues, 178 new warnings and 240 new info reports.

[Click](https://www.deepcode.ai/app/gh/ilscipio/scipio-erp/16f0ce5c1eb9c1f04e556eeb60cbc75d4eb4a08e/_/dashboard/) to see more details.


DeepCode has been upgraded! example-tree has been audited again to find new bugs and defects.

There are 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/liknenS/example-tree/36674f70abe77b8f56815d026332a5c9b322f039/_/dashboard/) to see more details.


DeepCode has been upgraded! xo5 has been audited again to find new bugs and defects.

There are 1 new warning and 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/liknenS/xo5/f275bc81eea1a91d5b3702be63f94afbf2ede055/_/dashboard/) to see more details.


DeepCode has been upgraded! TestConsoleApp has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! circleTable has been audited again to find new bugs and defects.

There are 1 new important issue and 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/moldoveanuvlad/circleTable/e5a3004b78e4824d4550cb7cda9df80dd4ae6dce/_/dashboard/) to see more details.


Can you please tell me more about how you saw this problem. Stack trace or steps to reproduce will help.


DeepCode has been upgraded! arduino-canbus-monitor has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! painlessMeshMqttGateway has been audited again to find new bugs and defects.

There are 2 new warnings and 6 new info reports.

[Click](https://www.deepcode.ai/app/gh/latonita/painlessMeshMqttGateway/69952c0f2cb6674e63e5b3bc6c360b8d2854ed90/_/dashboard/) to see more details.


DeepCode has been upgraded! esp-home-iot has been audited again to find new bugs and defects.

There are no new issues.


Successfully aliased the URL <https://itberries-frontend-9tcjqppd6.now.sh> to the following aliases.

* https://itberries-frontend.now.sh
* https://itberries-frontend-git-master.it-berries1.now.sh


Comment


cant find the aspx in file, reload it !


DeepCode has been upgraded! external-dns has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! coredns has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! floater has been audited again to find new bugs and defects.

There are 6 new info reports.

[Click](https://www.deepcode.ai/app/gh/sutharsha/floater/5aa704c0cd3dd246c35612ebabcc64df05fe5fb3/_/dashboard/) to see more details.


DeepCode has been upgraded! gmappolyline has been audited again to find new bugs and defects.

There are 5 new info reports.

[Click](https://www.deepcode.ai/app/gh/divlv/gmappolyline/e8f05a9cbf2b0b2acdbb6c375f8f437701d19661/_/dashboard/) to see more details.


DeepCode has been upgraded! account has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! iWatch has been audited again to find new bugs and defects.

There are no new issues.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


DeepCode has been upgraded! Parse_JulietTestSuite has been audited again to find new bugs and defects.

There are 764 new important issues, 676 new warnings and 48 new info reports.

[Click](https://www.deepcode.ai/app/gh/dongshen/Parse_JulietTestSuite/e28c82758693f6c51e43d9fb2b6baa22f60243aa/_/dashboard/) to see more details.


DeepCode has been upgraded! tester has been audited again to find new bugs and defects.

There are 8 new info reports.

[Click](https://www.deepcode.ai/app/gh/nothingnothingnothing2341r/tester/0810a3256dd637db5730b4afbd5bfd6884caecf1/_/dashboard/) to see more details.


DeepCode has been upgraded! trounce has been audited again to find new bugs and defects.

There are 2 new important issues and 9 new info reports.

[Click](https://www.deepcode.ai/app/gh/theydonthaveit/trounce/83511c107b8a3b684a81e482763397148fd97c53/_/dashboard/) to see more details.


I did it. I defined in Reposity List<Ad> findAll()


DeepCode has been upgraded! SpeedDate has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! QA has been audited again to find new bugs and defects.

There are 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/blarvin/QA/d214e80d6d2ef89b75673ef758f75fb70bfdde47/_/dashboard/) to see more details.


Awesome


DeepCode has been upgraded! Rex has been audited again to find new bugs and defects.

There are 10 new info reports.

[Click](https://www.deepcode.ai/app/gh/areknawo/Rex/97e1a52428b34f17f938578b95e45607278f3599/_/dashboard/) to see more details.


DeepCode has been upgraded! TicTacToe has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! SandboxJs has been audited again to find new bugs and defects.

There are 2 new warnings and 9 new info reports.

[Click](https://www.deepcode.ai/app/gh/rubenknuijver/SandboxJs/c72a09e67d2ed0b28c9c6bd274647d18a774093d/_/dashboard/) to see more details.


DeepCode has been upgraded! justBuy has been audited again to find new bugs and defects.

There are 2 new info reports.

[Click](https://www.deepcode.ai/app/gh/taxio/justBuy/49bb5a9982548b86f67e3ec24f29b844f9d0941b/_/dashboard/) to see more details.


DeepCode has been upgraded! Mapper has been audited again to find new bugs and defects.

There are 6 new info reports.

[Click](https://www.deepcode.ai/app/gh/Octoshape/Mapper/4c0a73cebe534dff58faf5dd208bcb40577c1aff/_/dashboard/) to see more details.


DeepCode has been upgraded! swagger-ui has been audited again to find new bugs and defects.

There are 7 new important issues, 4 new warnings and 19 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/swagger-ui/2ba1c100ae1132c01b03e37fb9d9bc9a3da6b927/_/dashboard/) to see more details.


DeepCode has been upgraded! OWASP-Benchmark has been audited again to find new bugs and defects.

There are 707 new important issues, 553 new warnings and 34 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/OWASP-Benchmark/47d9e74441347b0d23e149c3f9464e1f14a266da/_/dashboard/) to see more details.


I did it too. I use now List<Ad> findAllByCategoryId(long id) and List<Ad> findAllByUserId(long id). Thanks for the advice ;)


DeepCode has been upgraded! ough-cookie has been audited again to find new bugs and defects.

There are 8 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/ough-cookie/a928b54f6d08fc7bb966be5199fc2753e402348a/_/dashboard/) to see more details.


DeepCode has been upgraded! minimatch has been audited again to find new bugs and defects.

There are 1 new important issue, 3 new warnings and 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/minimatch/eed89491bd4a4e6bc463aac0dfb5c29ef0d1dc13/_/dashboard/) to see more details.


DeepCode has been upgraded! sequelize has been audited again to find new bugs and defects.

There are 2 new important issues, 9 new warnings and 33 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/sequelize/727ae363a20f0994a2f1eb04916cef4cb395dd94/_/dashboard/) to see more details.


DeepCode has been upgraded! gmail.js has been audited again to find new bugs and defects.

There are 10 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/gmail.js/5f9dbe3901acf2f75bf49de6b2bd141f194e9310/_/dashboard/) to see more details.


DeepCode has been upgraded! jqtree has been audited again to find new bugs and defects.

There are 2 new important issues, 4 new warnings and 25 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/jqtree/4f8753e9f0accea21b2e3706d33e580589da1dea/_/dashboard/) to see more details.


DeepCode has been upgraded! jqTreeContextMenu has been audited again to find new bugs and defects.

There are 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/jqTreeContextMenu/5a0f822c7e71e4aae91e366d8db437eb4d2beb85/_/dashboard/) to see more details.


DeepCode has been upgraded! jquery-ui has been audited again to find new bugs and defects.

There are 3 new important issues, 10 new warnings and 45 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/jquery-ui/cc37fe76aac4a09c37de83178e2c818c4400dff6/_/dashboard/) to see more details.


DeepCode has been upgraded! lobenton has been audited again to find new bugs and defects.

There are 2 new important issues, 4 new warnings and 8 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/lobenton/6c8c43bb33df7e3f74cbb44fbaac2c9e720dab8b/_/dashboard/) to see more details.


DeepCode has been upgraded! node-jws has been audited again to find new bugs and defects.

There are 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/node-jws/226378cbbeef4757f1b6920a947ae4caa481e7e3/_/dashboard/) to see more details.


DeepCode has been upgraded! node-jsonwebtoken has been audited again to find new bugs and defects.

There are 2 new warnings and 7 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/node-jsonwebtoken/05d99783045edc8cefdcf46353bfbe12db3f376d/_/dashboard/) to see more details.


DeepCode has been upgraded! rendr has been audited again to find new bugs and defects.

There are 1 new important issue, 4 new warnings and 24 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/rendr/48560e1ca1ad72c94c9c68fb9cfba3259163536e/_/dashboard/) to see more details.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


Successfully aliased the URL <https://imagineadrian-41ficcmyt.now.sh> to the following aliases.

* https://imagineadrian.com
* https://imagineadrian-git-master.hadrianix.now.sh


DeepCode has been upgraded! underscore has been audited again to find new bugs and defects.

There are 1 new important issue and 20 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/underscore/5b60fd49873e72c83604d14c65525000776ee929/_/dashboard/) to see more details.


DeepCode has been upgraded! sanitize-html has been audited again to find new bugs and defects.

There are 2 new warnings and 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/sanitize-html/2597e3b6d45592ecc665cedec8bec72362beacd9/_/dashboard/) to see more details.


DeepCode has been upgraded! fetch-fic has been audited again to find new bugs and defects.

There are 7 new warnings and 10 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/fetch-fic/c05386d3d2e217281bdf353194152be9b2c85b94/_/dashboard/) to see more details.


DeepCode has been upgraded! bootstrap-tagsinput has been audited again to find new bugs and defects.

There are 1 new warning and 11 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/bootstrap-tagsinput/41fe4aa2201c4af4cfc4293fa3fc8260ad60bf35/_/dashboard/) to see more details.


DeepCode has been upgraded! wdqs-ui has been audited again to find new bugs and defects.

There are 9 new warnings and 13 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/wdqs-ui/845275c81e43d46121f9e446ea48b914bf7f217b/_/dashboard/) to see more details.


DeepCode has been upgraded! fuelux has been audited again to find new bugs and defects.

There are 1 new important issue, 1 new warning and 15 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/fuelux/7cb7900617d0ba8a035eaf4e640f839e44929ec7/_/dashboard/) to see more details.


DeepCode has been upgraded! fuelux-mctheme has been audited again to find new bugs and defects.

There are 1 new important issue, 2 new warnings and 11 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/fuelux-mctheme/eb72d2fea004c24b0d7b9617360e3e0a24223479/_/dashboard/) to see more details.


DeepCode has been upgraded! urllib3 has been audited again to find new bugs and defects.

There are 14 new important issues, 2 new warnings and 61 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/urllib3/e6cae79847c463bda9504da2cbffc33846c98fd9/_/dashboard/) to see more details.


DeepCode has been upgraded! webgoatnet has been audited again to find new bugs and defects.

There are 5 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/webgoatnet/e6a9a00ef89a773e931c9f68b4a9d8623bd4700e/_/dashboard/) to see more details.


DeepCode has been upgraded! jenkins has been audited again to find new bugs and defects.

There are 10 new important issues, 25 new warnings and 152 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/jenkins/a8994d4fa55eb4f5ba1b5a60837876c8107eeb95/_/dashboard/) to see more details.


DeepCode has been upgraded! angular.js has been audited again to find new bugs and defects.

There are 3 new important issues, 11 new warnings and 58 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/angular.js/a86a3195b47264fb683a8700e492cff2de81d45a/_/dashboard/) to see more details.


Aliasing failed with the following error:

~~~
Error! Instance verification timed out (5m)
~~~


Le faltó anexar la clase ExcepcionNumero.


DeepCode has been upgraded! netty has been audited again to find new bugs and defects.

There are 1 new important issue, 7 new warnings and 95 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/netty/9bcf31977c69d2b70c486ac7af3c07e9f0db29c9/_/dashboard/) to see more details.


DeepCode has been upgraded! game-of-life has been audited again to find new bugs and defects.

There are 2 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/game-of-life/c3f57961fc843bf2564fa2cc9fac95b4e167ca31/_/dashboard/) to see more details.


DeepCode has been upgraded! Bukkit has been audited again to find new bugs and defects.

There are 3 new warnings and 43 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/Bukkit/f210234e59275330f83b994e199c76f6abd41ee7/_/dashboard/) to see more details.


DeepCode has been upgraded! flume has been audited again to find new bugs and defects.

There are 6 new warnings and 63 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/flume/1d7535638556998e895d55599a2f4a024390edd1/_/dashboard/) to see more details.


DeepCode has been upgraded! ambrose has been audited again to find new bugs and defects.

There are 5 new warnings and 30 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/ambrose/da7bcb932c418c157d9c372a4ca5f1884b874d78/_/dashboard/) to see more details.


DeepCode has been upgraded! actionview has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! discourse has been audited again to find new bugs and defects.

There are 4 new warnings and 17 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/discourse/83a430d6a5524ab3fceb209ec03ffb71725f969c/_/dashboard/) to see more details.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


DeepCode has been upgraded! gitlabhq has been audited again to find new bugs and defects.

There are 2 new important issues, 5 new warnings and 31 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/gitlabhq/f17397ce111b1484c11339b6a97ddd390333683f/_/dashboard/) to see more details.


DeepCode has been upgraded! railsgoat has been audited again to find new bugs and defects.

There are 1 new warning and 42 new info reports.

[Click](https://www.deepcode.ai/app/gh/shimi-eshkenazi/railsgoat/2988d6111974936cba823ba6660629ce4d3743c4/_/dashboard/) to see more details.


Hi! This is the friendly automated conda-forge-webservice.

I updated the Github team because of this commit.

- @jsignell was added to this feedstock maintenance team.

You should get push access to this feedstock and CI services.

Feel free to join the community [chat room](https://gitter.im/conda-forge/conda-forge.github.io).

NOTE: Please make sure to not push to the repository directly.
      Use branches in your fork for any changes and send a PR.
      More details [here](https://conda-forge.org/docs/conda-forge_gotchas.html#using-a-fork-vs-a-branch-when-updating-a-recipe)


DeepCode has been upgraded! code_snippets has been audited again to find new bugs and defects.

There are 1 new important issue, 7 new warnings and 22 new info reports.

[Click](https://www.deepcode.ai/app/gh/BlackBlueGhost/code_snippets/be8c7c62d39f262b15c72b3d04146da45abf8a9a/_/dashboard/) to see more details.


DeepCode has been upgraded! vcflib has been audited again to find new bugs and defects.

There are 2 new info reports.

[Click](https://www.deepcode.ai/app/gh/BlackBlueGhost/vcflib/7e3d8066a6c6c0f22191a70d050ead23f9c453b3/_/dashboard/) to see more details.


DeepCode has been upgraded! ChineseWhispers has been audited again to find new bugs and defects.

There are 7 new info reports.

[Click](https://www.deepcode.ai/app/gh/fabawi/ChineseWhispers/d1cac68c813ebf5ee13d7d05233e5fa4d1099b32/_/dashboard/) to see more details.


DeepCode has been upgraded! proto-java_hcp_bluegreen has been audited again to find new bugs and defects.

There is 1 new info report.

[Click](https://www.deepcode.ai/app/gh/Vamshykrishna/proto-java_hcp_bluegreen/ea74de68f5365595ca5aa9e8a6fc921c0dac478f/_/dashboard/) to see more details.


DeepCode has been upgraded! leafjem has been audited again to find new bugs and defects.

There are 7 new info reports.

[Click](https://www.deepcode.ai/app/gh/Brecert/leafjem/1470d020f7d97d1717421f813c4c28660eabf754/_/dashboard/) to see more details.


DeepCode has been upgraded! jdk8u has been audited again to find new bugs and defects.

There are 25 new important issues, 65 new warnings and 449 new info reports.

[Click](https://www.deepcode.ai/app/gh/czechgerald/jdk8u/98037bbc483a3c848ee5720d1ebd0d85988cdba2/_/dashboard/) to see more details.


DeepCode has been upgraded! ijoshwang.github.io has been audited again to find new bugs and defects.

There are no new issues.


Because of this change, it seems that a Kafka source can not be run in micro-batch mode but only in continuous mode. Is that understanding correct ?


By the way, i'll revert the fix asap.

Daniel Marjamäki <notifications@github.com> schrieb am Mo., 8. Apr. 2019,
20:03:

> you do not need to reduce a test case that crash.. If you can see that
> there is a ++ or -- that does not have operands you can try to reduce
> that.
>
> This fix does not feel good to me. I think we should revert it. There are
> probably a bunch of old similar fixes that should be reverted but it's so
> hard to find those.
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/danmar/cppcheck/commit/0ace50204bb853a8b07f563a5dd0ebe9da518d1d#commitcomment-33083237>,
> or mute the thread
> <https://github.com/notifications/unsubscribe-auth/AAJjMFTSkSxcvJKMjaUDJN7E3tziXCQLks5ve4R-gaJpZM4cgtHw>
> .
>


DeepCode has been upgraded! CodeGuide has been audited again to find new bugs and defects.

There are 4 new info reports.

[Click](https://www.deepcode.ai/app/gh/ijoshwang/CodeGuide/a6f75ccae501bba86a2ff313874e49cf48921796/_/dashboard/) to see more details.


DeepCode has been upgraded! next.js has been audited again to find new bugs and defects.

There are 2 new important issues, 7 new warnings and 34 new info reports.

[Click](https://www.deepcode.ai/app/gh/ijoshwang/next.js/24386b93dcf1888cb2a908a5000afba562c5a663/_/dashboard/) to see more details.


DeepCode has been upgraded! mist has been audited again to find new bugs and defects.

There are 2 new important issues, 7 new warnings and 24 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/mist/66c0b1253812b1a487a1fb0e55778ad7c26fece7/_/dashboard/) to see more details.


DeepCode has been upgraded! rokon has been audited again to find new bugs and defects.

There are 1 new warning and 13 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/rokon/54ca7eaf11c6b4f25e9e9be064e027ef09ccea8f/_/dashboard/) to see more details.


DeepCode has been upgraded! EIPs has been audited again to find new bugs and defects.

There are 3 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/EIPs/46d1ba6452ad31cade17d3550548a1ca78e8a192/_/dashboard/) to see more details.


DeepCode has been upgraded! awesome-coins has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! github-move has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! go-ethereum has been audited again to find new bugs and defects.

There are 14 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/go-ethereum/62e94895da80838ec694b4ba19eeac80c9dc88c1/_/dashboard/) to see more details.


DeepCode has been upgraded! byteball has been audited again to find new bugs and defects.

There are 1 new important issue, 7 new warnings and 27 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/byteball/fb9f15fa1fe49d3f99416fc786c84ba50892f05e/_/dashboard/) to see more details.


DeepCode has been upgraded! contributor_covenant has been audited again to find new bugs and defects.

There are no new issues.


# Specs execution successful
:scroll: [View logs](http://bamboo.comnull)
### Plans updated

Bamboo specs have been successfully imported and the following plans have been updated.

Project | Plan | Build
---|---|---
[Test](http://bamboo.com/browse/TEST) | [Comment test](http://bamboo.com/browse/TEST-CTEST)  | :white_check_mark: [\#1](http://bamboo.com/browse/TEST-CTEST-1)
[New project](http://bamboo.com/browse/NEW) | [Disabled plan](http://bamboo.com/browse/NEW-DISABLED) **disabled** | :white_check_mark: [\#1](http://bamboo.com/browse/NEW-DISABLED-1)

### Deployments updated

Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


DeepCode has been upgraded! bitcoin has been audited again to find new bugs and defects.

There are 3 new important issues, 1 new warning and 84 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/bitcoin/35d7d9471f9640f67820ec699b0e34a7ec5d7fb6/_/dashboard/) to see more details.


DeepCode has been upgraded! copay has been audited again to find new bugs and defects.

There are 2 new important issues, 75 new warnings and 24 new info reports.

[Click](https://www.deepcode.ai/app/gh/Ali8668/copay/982a5c0abaf65a02339d32317c9fb7cb01412063/_/dashboard/) to see more details.


DeepCode has been upgraded! parity-ethereum has been audited again to find new bugs and defects.

There are no new issues.


DeepCode has been upgraded! plunker_run has been audited again to find new bugs and defects.

There are 1 new warning and 1 new info report.

[Click](https://www.deepcode.ai/app/gh/Ali8668/plunker_run/b5ca58f23bdadc77e1ae5c5522f1e5e51fc1cd75/_/dashboard/) to see more details.