[R/boxplots.R:2:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
  utils::globalVariables(c(".", ":=", ".SD", "ageClass", "group", "proportionCC",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:11:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L11) *style:* **Variable or function name should be snake_case.**
```r
.doPlotBoxplot <- function(data, authStatus, fname = NULL, ageClasses,
^~~~~~~~~~~~~~
```
[R/boxplots.R:11:34:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L11) *style:* **Variable or function name should be snake_case.**
```r
.doPlotBoxplot <- function(data, authStatus, fname = NULL, ageClasses,
                                 ^~~~~~~~~~
```
[R/boxplots.R:11:60:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L11) *style:* **Variable or function name should be snake_case.**
```r
.doPlotBoxplot <- function(data, authStatus, fname = NULL, ageClasses,
                                                           ^~~~~~~~~~
```
[R/boxplots.R:12:41:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L12) *style:* **Variable or function name should be snake_case.**
```r
                           fout = NULL, vegCover, zone, ...) {
                                        ^~~~~~~~
```
[R/boxplots.R:16:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L16) *style:* **Variable or function name should be snake_case.**
```r
  boxplotData <- data.table(zone = rep(zone, 4),
  ^~~~~~~~~~~
```
[R/boxplots.R:32:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
    points(data$proportionCC[ids], factor(data$ageClass[1:4]), col = "red", pch = 20, cex = 3)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:55:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L55) *style:* **Variable or function name should be snake_case.**
```r
runBoxPlotsVegCover <- function(map, functionName, analysisGroups, dPath) {
^~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:55:38:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L55) *style:* **Variable or function name should be snake_case.**
```r
runBoxPlotsVegCover <- function(map, functionName, analysisGroups, dPath) {
                                     ^~~~~~~~~~~~
```
[R/boxplots.R:55:52:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L55) *style:* **Variable or function name should be snake_case.**
```r
runBoxPlotsVegCover <- function(map, functionName, analysisGroups, dPath) {
                                                   ^~~~~~~~~~~~~~
```
[R/boxplots.R:55:68:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L55) *style:* **Variable or function name should be snake_case.**
```r
runBoxPlotsVegCover <- function(map, functionName, analysisGroups, dPath) {
                                                                   ^~~~~
```
[R/boxplots.R:56:4:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L56) *style:* **Commented code should be removed.**
```r
  #ageClasses = c("Young", "Immature", "Mature", "Old")
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:57:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L57) *style:* **Variable or function name should be snake_case.**
```r
  ageClasses <- c("Young", "Immature", "Mature", "Old")
  ^~~~~~~~~~
```
[R/boxplots.R:58:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L58) *style:* **Variable or function name should be snake_case.**
```r
  allRepPolys <- na.omit(map@metadata[[analysisGroups]])
  ^~~~~~~~~~~
```
[R/boxplots.R:62:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L62) *style:* **Lines should not be more than 80 characters.**
```r
    allData <- map@analysesData[[functionName]][["LeadingVegTypeByAgeClass"]][[poly]]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:62:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L62) *style:* **Variable or function name should be snake_case.**
```r
    allData <- map@analysesData[[functionName]][["LeadingVegTypeByAgeClass"]][[poly]]
    ^~~~~~~
```
[R/boxplots.R:64:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L64) *style:* **Variable or function name should be snake_case.**
```r
      allData <- map@analysesData[[functionName]][[poly]] ## TODO: fix upstream
      ^~~~~~~
```
[R/boxplots.R:65:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L65) *style:* **Variable or function name should be snake_case.**
```r
    allData <- unique(allData) ## remove duplicates; with LandWeb#89
    ^~~~~~~
```
[R/boxplots.R:66:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L66) *style:* **Variable or function name should be snake_case.**
```r
    allData$vegCover <- gsub(" leading", "", allData$vegCover) %>%
            ^~~~~~~~
```
[R/boxplots.R:69:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L69) *style:* **Variable or function name should be snake_case.**
```r
    allData$ageClass <- factor(allData$ageClass, ageClasses)
            ^~~~~~~~
```
[R/boxplots.R:71:34:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L71) *warning:* **no visible binding for global variable ‘group’, Did you mean 'drop'?**
```r
    data <- allData[!grepl("CC", group)]
                                 ^~~~~
```
[R/boxplots.R:73:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L73) *style:* **Variable or function name should be snake_case.**
```r
    dataCC <- allData[grepl("CC", group)]
    ^~~~~~
```
[R/boxplots.R:73:35:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L73) *warning:* **no visible binding for global variable ‘group’, Did you mean 'drop'?**
```r
    dataCC <- allData[grepl("CC", group)]
                                  ^~~~~
```
[R/boxplots.R:74:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L74) *style:* **Lines should not be more than 80 characters.**
```r
    setnames(dataCC, "proportion", "proportionCC") ## rename the column to proportionCC
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:74:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L74) *warning:* **no visible global function definition for ‘setnames’, Did you mean 'setNames'?**
```r
    setnames(dataCC, "proportion", "proportionCC") ## rename the column to proportionCC
    ^~~~~~~~
```
[R/boxplots.R:75:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L75) *style:* **Variable or function name should be snake_case.**
```r
    dataCC <- dataCC[, c("group", "label", "NPixels") := list(NULL, NULL, NULL)]
    ^~~~~~
```
[R/boxplots.R:75:55:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L75) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
    dataCC <- dataCC[, c("group", "label", "NPixels") := list(NULL, NULL, NULL)]
                                                      ^~
```
[R/boxplots.R:77:32:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L77) *warning:* **no visible global function definition for ‘.’, Did you mean 'C'?**
```r
    data2 <- dataCC[data, on = .(zone, vegCover, ageClass)]
                               ^
```
[R/boxplots.R:77:34:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L77) *warning:* **no visible binding for global variable ‘zone’, Did you mean 'line'?**
```r
    data2 <- dataCC[data, on = .(zone, vegCover, ageClass)]
                                 ^~~~
```
[R/boxplots.R:77:40:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L77) *warning:* **no visible binding for global variable ‘vegCover’**
```r
    data2 <- dataCC[data, on = .(zone, vegCover, ageClass)]
                                       ^~~~~~~~
```
[R/boxplots.R:77:50:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L77) *warning:* **no visible binding for global variable ‘ageClass’, Did you mean 'ageClasses'?**
```r
    data2 <- dataCC[data, on = .(zone, vegCover, ageClass)]
                                                 ^~~~~~~~
```
[R/boxplots.R:78:17:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L78) *warning:* **no visible binding for global variable ‘NPixels’**
```r
    data2[is.na(NPixels), NPixels := 0]
                ^~~~~~~
```
[R/boxplots.R:78:17:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L78) *warning:* **no visible binding for global variable ‘NPixels’**
```r
    data2[is.na(NPixels), NPixels := 0]
                ^~~~~~~
```
[R/boxplots.R:78:27:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L78) *style:* **Variable or function name should be snake_case.**
```r
    data2[is.na(NPixels), NPixels := 0]
                          ^~~~~~~
```
[R/boxplots.R:78:35:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L78) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
    data2[is.na(NPixels), NPixels := 0]
                                  ^~
```
[R/boxplots.R:81:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    ## NOTE: this is number of TREED pixels, which is likely smaller than the polygon area
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:82:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L82) *style:* **Variable or function name should be snake_case.**
```r
    data2[, totalPixels := as.double(base::sum(NPixels, na.rm = TRUE)),
            ^~~~~~~~~~~
```
[R/boxplots.R:84:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L84) *style:* **Variable or function name should be snake_case.**
```r
    data2[, totalPixels2 := as.double(base::mean(totalPixels, na.rm = TRUE)),
            ^~~~~~~~~~~~
```
[R/boxplots.R:86:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L86) *style:* **Lines should not be more than 80 characters.**
```r
    try(write.csv(data2, file.path(dPath, paste0("leading_", gsub(" ", "_", poly), ".csv"))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:93:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L93) *style:* **Lines should not be more than 80 characters.**
```r
    fout <- file.path(dPath, paste0("leading_boxplots_", gsub(" ", "_", poly), ".csv"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:96:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L96) *style:* **Variable or function name should be snake_case.**
```r
    saveDir <- checkPath(file.path(dPath, poly), create = TRUE)
    ^~~~~~~
```
[R/boxplots.R:96:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L96) *warning:* **local variable ‘saveDir’ assigned but may not be used**
```r
    saveDir <- checkPath(file.path(dPath, poly), create = TRUE)
    ^~~~~~~
```
[R/boxplots.R:96:16:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L96) *warning:* **no visible global function definition for ‘checkPath’**
```r
    saveDir <- checkPath(file.path(dPath, poly), create = TRUE)
               ^~~~~~~~~
```
[R/boxplots.R:97:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
    savePng <- quote(file.path(saveDir, paste0(unique(paste(zone, vegCover, collapse = " ")), ".png")))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:97:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L97) *style:* **Variable or function name should be snake_case.**
```r
    savePng <- quote(file.path(saveDir, paste0(unique(paste(zone, vegCover, collapse = " ")), ".png")))
    ^~~~~~~
```
[R/boxplots.R:108:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L108) *style:* **Lines should not be more than 80 characters.**
```r
                                    main = unique(paste(zone, vegCover, collapse = "_")),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:109:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L109) *style:* **Lines should not be more than 80 characters.**
```r
                                    xlab = paste0("Proportion of forest area (total ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:111:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L111) *style:* **Lines should not be more than 80 characters.**
```r
                                                           prod(res(rasterToMatch(map))) / 1e4,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/boxplots.R:117:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/boxplots.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
          .SDcols = c("ageClass", "proportion", "proportionCC", "NPixels"), by = slices]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:8:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L8) *style:* **Variable or function name should be snake_case.**
```r
.doPlotHistogram <- function(data, xlim, fname = NULL, ...) {
^~~~~~~~~~~~~~~~
```
[R/histograms.R:9:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L9) *style:* **Variable or function name should be snake_case.**
```r
  minNumBars <- 6
  ^~~~~~~~~~
```
[R/histograms.R:10:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L10) *style:* **Variable or function name should be snake_case.**
```r
  maxNumBars <- 30
  ^~~~~~~~~~
```
[R/histograms.R:11:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L11) *style:* **Variable or function name should be snake_case.**
```r
  rangeNClusters <- range(c(0, xlim, minNumBars)) ## TODO: verify
  ^~~~~~~~~~~~~~
```
[R/histograms.R:12:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L12) *style:* **Variable or function name should be snake_case.**
```r
  attemptedNumBars <- max(minNumBars, min(maxNumBars, diff(rangeNClusters)))
  ^~~~~~~~~~~~~~~~
```
[R/histograms.R:14:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L14) *style:* **Lines should not be more than 80 characters.**
```r
  breaksRaw <- seq(rangeNClusters[1], rangeNClusters[2], length.out = attemptedNumBars)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:14:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L14) *style:* **Variable or function name should be snake_case.**
```r
  breaksRaw <- seq(rangeNClusters[1], rangeNClusters[2], length.out = attemptedNumBars)
  ^~~~~~~~~
```
[R/histograms.R:15:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L15) *style:* **Lines should not be more than 80 characters.**
```r
  prettyBreaks <- pretty(breaksRaw, n = attemptedNumBars, min.n = min(attemptedNumBars, minNumBars))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:15:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L15) *style:* **Variable or function name should be snake_case.**
```r
  prettyBreaks <- pretty(breaksRaw, n = attemptedNumBars, min.n = min(attemptedNumBars, minNumBars))
  ^~~~~~~~~~~~
```
[R/histograms.R:17:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L17) *style:* **Variable or function name should be snake_case.**
```r
  dataForBreaks <- dataForHistogram <- if (NROW(data) == 0) {
  ^~~~~~~~~~~~~
```
[R/histograms.R:17:20:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L17) *style:* **Variable or function name should be snake_case.**
```r
  dataForBreaks <- dataForHistogram <- if (NROW(data) == 0) {
                   ^~~~~~~~~~~~~~~~
```
[R/histograms.R:24:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L24) *style:* **Variable or function name should be snake_case.**
```r
  breaksLabels <- dataForBreaks$breaks
  ^~~~~~~~~~~~
```
[R/histograms.R:25:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L25) *style:* **Variable or function name should be snake_case.**
```r
  breaksInterval <- diff(breaksLabels)[1]
  ^~~~~~~~~~~~~~
```
[R/histograms.R:27:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L27) *style:* **Lines should not be more than 80 characters.**
```r
  histogramData <- dataForHistogram$counts / sum(dataForHistogram$counts) ## use proportion
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:27:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L27) *style:* **Variable or function name should be snake_case.**
```r
  histogramData <- dataForHistogram$counts / sum(dataForHistogram$counts) ## use proportion
  ^~~~~~~~~~~~~
```
[R/histograms.R:28:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L28) *style:* **Lines should not be more than 80 characters.**
```r
  histogramData[is.na(histogramData)] <- 0 # NA means that there were no large patches in dt
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:29:2:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L29) *style:* **Commented code should be removed.**
```r
#browser()
 ^~~~~~~~~
```
[R/histograms.R:30:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L30) *style:* **Variable or function name should be snake_case.**
```r
  barplotBreaks <- seq_along(breaksLabels) - 0.5
  ^~~~~~~~~~~~~
```
[R/histograms.R:31:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L31) *style:* **Lines should not be more than 80 characters.**
```r
  addAxisParams <- list(side = 1, labels = breaksLabels, at = barplotBreaks - min(breaksLabels))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:31:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L31) *style:* **Variable or function name should be snake_case.**
```r
  addAxisParams <- list(side = 1, labels = breaksLabels, at = barplotBreaks - min(breaksLabels))
  ^~~~~~~~~~~~~
```
[R/histograms.R:32:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
  verticalLineAtX <- unique(data$NCC)[1] / breaksInterval + 0.5 # The barplot xaxis is 1/2 a barwidth off
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:32:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L32) *style:* **Variable or function name should be snake_case.**
```r
  verticalLineAtX <- unique(data$NCC)[1] / breaksInterval + 0.5 # The barplot xaxis is 1/2 a barwidth off
  ^~~~~~~~~~~~~~~
```
[R/histograms.R:37:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L37) *style:* **Lines should not be more than 80 characters.**
```r
  if (!is.null(verticalLineAtX)) abline(v = verticalLineAtX, col = "red", lwd = 3)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:57:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L57) *style:* **Variable or function name should be snake_case.**
```r
runHistsLargePatches <- function(map, functionName, analysisGroups, dPath) {
^~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:57:39:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L57) *style:* **Variable or function name should be snake_case.**
```r
runHistsLargePatches <- function(map, functionName, analysisGroups, dPath) {
                                      ^~~~~~~~~~~~
```
[R/histograms.R:57:53:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L57) *style:* **Variable or function name should be snake_case.**
```r
runHistsLargePatches <- function(map, functionName, analysisGroups, dPath) {
                                                    ^~~~~~~~~~~~~~
```
[R/histograms.R:57:69:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L57) *style:* **Variable or function name should be snake_case.**
```r
runHistsLargePatches <- function(map, functionName, analysisGroups, dPath) {
                                                                    ^~~~~
```
[R/histograms.R:58:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L58) *style:* **Variable or function name should be snake_case.**
```r
  allRepPolys <- na.omit(map@metadata[[analysisGroups]])
  ^~~~~~~~~~~
```
[R/histograms.R:62:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L62) *style:* **Variable or function name should be snake_case.**
```r
    allData <- map@analysesData[[functionName]][["LargePatches"]][[poly]]
    ^~~~~~~
```
[R/histograms.R:64:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L64) *style:* **Variable or function name should be snake_case.**
```r
      allData <- map@analysesData[[functionName]][[poly]] ## TODO: fix upstream
      ^~~~~~~
```
[R/histograms.R:66:34:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L66) *warning:* **no visible binding for global variable ‘group’, Did you mean 'drop'?**
```r
    data <- allData[!grepl("CC", group)]
                                 ^~~~~
```
[R/histograms.R:67:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L67) *style:* **Variable or function name should be snake_case.**
```r
    dataCC <- allData[grepl("CC", group)]
    ^~~~~~
```
[R/histograms.R:67:35:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L67) *warning:* **no visible binding for global variable ‘group’, Did you mean 'drop'?**
```r
    dataCC <- allData[grepl("CC", group)]
                                  ^~~~~
```
[R/histograms.R:69:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L69) *style:* **Lines should not be more than 80 characters.**
```r
    data$rep <- as.numeric(factor(data$group)) ## TODO: workaround for incorrect rep values from LargePatches
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:72:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L72) *style:* **Variable or function name should be snake_case.**
```r
    slicesNoRep <- slices[slices != "rep"]
    ^~~~~~~~~~~
```
[R/histograms.R:74:19:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L74) *warning:* **no visible binding for global variable ‘ageClass’, Did you mean 'getClass'?**
```r
    data <- data[!ageClass == "NA" | !vegCover == "NA"]
                  ^~~~~~~~
```
[R/histograms.R:74:39:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L74) *warning:* **no visible binding for global variable ‘vegCover’**
```r
    data <- data[!ageClass == "NA" | !vegCover == "NA"]
                                      ^~~~~~~~
```
[R/histograms.R:75:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L75) *style:* **Variable or function name should be snake_case.**
```r
    emptyDT <- data.table(expand.grid(ageClass = unique(data$ageClass),
    ^~~~~~~
```
[R/histograms.R:80:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L80) *style:* **Variable or function name should be snake_case.**
```r
    patchSizes <- c(100, 500, 1000, 5000) ## minPatchSize <- 100
    ^~~~~~~~~~
```
[R/histograms.R:80:46:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L80) *style:* **Commented code should be removed.**
```r
    patchSizes <- c(100, 500, 1000, 5000) ## minPatchSize <- 100
                                             ^~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:82:41:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L82) *style:* **Variable or function name should be snake_case.**
```r
    fout <- lapply(patchSizes, function(minPatchSize) {
                                        ^~~~~~~~~~~~
```
[R/histograms.R:83:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L83) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT <- data[sizeInHa >= minPatchSize, .N, by = slices]
      ^~~~~~~~~~~
```
[R/histograms.R:83:27:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L83) *warning:* **no visible binding for global variable ‘sizeInHa’**
```r
      nClustersDT <- data[sizeInHa >= minPatchSize, .N, by = slices]
                          ^~~~~~~~
```
[R/histograms.R:83:53:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L83) *warning:* **no visible binding for global variable ‘.N’, Did you mean 'ar'?**
```r
      nClustersDT <- data[sizeInHa >= minPatchSize, .N, by = slices]
                                                    ^~
```
[R/histograms.R:84:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L84) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT <- nClustersDT[emptyDT, on = slices, nomatch = NA]
      ^~~~~~~~~~~
```
[R/histograms.R:85:25:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L85) *warning:* **no visible binding for global variable ‘N’, Did you mean 'C'?**
```r
      nClustersDT[is.na(N), N := 0]
                        ^
```
[R/histograms.R:85:25:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L85) *warning:* **no visible binding for global variable ‘N’, Did you mean 'C'?**
```r
      nClustersDT[is.na(N), N := 0]
                        ^
```
[R/histograms.R:85:29:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L85) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT[is.na(N), N := 0]
                            ^
```
[R/histograms.R:85:31:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L85) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
      nClustersDT[is.na(N), N := 0]
                              ^~
```
[R/histograms.R:87:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L87) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT_CC <- dataCC[sizeInHa >= minPatchSize, .N, by = slicesNoRep]
      ^~~~~~~~~~~~~~
```
[R/histograms.R:87:32:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L87) *warning:* **no visible binding for global variable ‘sizeInHa’**
```r
      nClustersDT_CC <- dataCC[sizeInHa >= minPatchSize, .N, by = slicesNoRep]
                               ^~~~~~~~
```
[R/histograms.R:87:58:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L87) *warning:* **no visible binding for global variable ‘.N’, Did you mean 'ar'?**
```r
      nClustersDT_CC <- dataCC[sizeInHa >= minPatchSize, .N, by = slicesNoRep]
                                                         ^~
```
[R/histograms.R:88:8:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L88) *style:* **Commented code should be removed.**
```r
      #nClustersDT_CC$rep <- as.numeric(nClustersDT_CC$rep)
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:89:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L89) *warning:* **no visible global function definition for ‘setnames’, Did you mean 'setNames'?**
```r
      setnames(nClustersDT_CC, "N", "NCC")
      ^~~~~~~~
```
[R/histograms.R:90:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L90) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT_CC <- nClustersDT_CC[emptyDT, on = slicesNoRep, nomatch = NA]
      ^~~~~~~~~~~~~~
```
[R/histograms.R:91:28:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L91) *warning:* **no visible binding for global variable ‘NCC’, Did you mean 'AIC'?**
```r
      nClustersDT_CC[is.na(NCC), NCC := 0]
                           ^~~
```
[R/histograms.R:91:28:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L91) *warning:* **no visible binding for global variable ‘NCC’, Did you mean 'AIC'?**
```r
      nClustersDT_CC[is.na(NCC), NCC := 0]
                           ^~~
```
[R/histograms.R:91:34:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L91) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT_CC[is.na(NCC), NCC := 0]
                                 ^~~
```
[R/histograms.R:91:38:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L91) *warning:* **no visible global function definition for ‘:=’, Did you mean ':'?**
```r
      nClustersDT_CC[is.na(NCC), NCC := 0]
                                     ^~
```
[R/histograms.R:93:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L93) *style:* **Variable or function name should be snake_case.**
```r
      nClustersDT <- nClustersDT[nClustersDT_CC, on = slices]
      ^~~~~~~~~~~
```
[R/histograms.R:97:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L97) *style:* **Lines should not be more than 80 characters.**
```r
                                                         "_", minPatchSize, ".csv"))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:99:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L99) *style:* **Lines should not be more than 80 characters.**
```r
      saveDir <- checkPath(file.path(dPath, poly, "largePatches", minPatchSize), create = TRUE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:99:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L99) *style:* **Variable or function name should be snake_case.**
```r
      saveDir <- checkPath(file.path(dPath, poly, "largePatches", minPatchSize), create = TRUE)
      ^~~~~~~
```
[R/histograms.R:99:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L99) *warning:* **local variable ‘saveDir’ assigned but may not be used**
```r
      saveDir <- checkPath(file.path(dPath, poly, "largePatches", minPatchSize), create = TRUE)
      ^~~~~~~
```
[R/histograms.R:99:18:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L99) *warning:* **no visible global function definition for ‘checkPath’**
```r
      saveDir <- checkPath(file.path(dPath, poly, "largePatches", minPatchSize), create = TRUE)
                 ^~~~~~~~~
```
[R/histograms.R:100:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L100) *style:* **Variable or function name should be snake_case.**
```r
      savePng <- quote(file.path(saveDir, paste0(paste(unique(polygonName),
      ^~~~~~~
```
[R/histograms.R:103:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
                                                       collapse = " "), ".png")))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:105:8:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L105) *style:* **Commented code should be removed.**
```r
      #browser()
       ^~~~~~~~~
```
[R/histograms.R:117:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
                                              xlab = paste0("Number of patches greater than ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/histograms.R:118:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/histograms.R#L118) *style:* **Lines should not be more than 80 characters.**
```r
                                                            minPatchSize, " ha"),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:25:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L25) *style:* **Lines should not be more than 80 characters.**
```r
LargePatches <- function(tsf, vtm, poly, labelColumn, id, ageClassCutOffs, ageClasses,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:25:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L25) *style:* **Variable or function name should be snake_case.**
```r
LargePatches <- function(tsf, vtm, poly, labelColumn, id, ageClassCutOffs, ageClasses,
^~~~~~~~~~~~
```
[R/largePatches.R:25:42:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L25) *style:* **Variable or function name should be snake_case.**
```r
LargePatches <- function(tsf, vtm, poly, labelColumn, id, ageClassCutOffs, ageClasses,
                                         ^~~~~~~~~~~
```
[R/largePatches.R:25:59:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L25) *style:* **Variable or function name should be snake_case.**
```r
LargePatches <- function(tsf, vtm, poly, labelColumn, id, ageClassCutOffs, ageClasses,
                                                          ^~~~~~~~~~~~~~~
```
[R/largePatches.R:25:76:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L25) *style:* **Variable or function name should be snake_case.**
```r
LargePatches <- function(tsf, vtm, poly, labelColumn, id, ageClassCutOffs, ageClasses,
                                                                           ^~~~~~~~~~
```
[R/largePatches.R:26:26:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L26) *style:* **Variable or function name should be snake_case.**
```r
                         sppEquivCol, sppEquiv) {
                         ^~~~~~~~~~~
```
[R/largePatches.R:26:39:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L26) *style:* **Variable or function name should be snake_case.**
```r
                         sppEquivCol, sppEquiv) {
                                      ^~~~~~~~
```
[R/largePatches.R:32:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L32) *style:* **Variable or function name should be snake_case.**
```r
  timeSinceFireFilesRast <- Cache(.rasterToMemory, tsf[1])
  ^~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:32:29:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L32) *warning:* **no visible global function definition for ‘Cache’**
```r
  timeSinceFireFilesRast <- Cache(.rasterToMemory, tsf[1])
                            ^~~~~
```
[R/largePatches.R:32:35:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L32) *warning:* **no visible binding for global variable ‘.rasterToMemory’**
```r
  timeSinceFireFilesRast <- Cache(.rasterToMemory, tsf[1])
                                  ^~~~~~~~~~~~~~~
```
[R/largePatches.R:41:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L41) *style:* **Variable or function name should be snake_case.**
```r
  rasRepPoly <- Cache(
  ^~~~~~~~~~
```
[R/largePatches.R:44:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
    emptyRaster = raster(timeSinceFireFilesRast), # doesn't need to the data -- makes Caching more effective
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:49:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L49) *style:* **Variable or function name should be snake_case.**
```r
  rasVeg <- Cache(.rasterToMemory, vtm)
  ^~~~~~
```
[R/largePatches.R:49:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L49) *warning:* **no visible global function definition for ‘Cache’**
```r
  rasVeg <- Cache(.rasterToMemory, vtm)
            ^~~~~
```
[R/largePatches.R:49:19:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L49) *warning:* **no visible binding for global variable ‘.rasterToMemory’**
```r
  rasVeg <- Cache(.rasterToMemory, vtm)
                  ^~~~~~~~~~~~~~~
```
[R/largePatches.R:51:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
  splitVal <- paste0("_", 75757575, "_") # unlikely to occur for any other reason
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:51:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L51) *style:* **Variable or function name should be snake_case.**
```r
  splitVal <- paste0("_", 75757575, "_") # unlikely to occur for any other reason
  ^~~~~~~~
```
[R/largePatches.R:55:35:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L55) *warning:* **no visible global function definition for ‘factorValues2’**
```r
  nas2 <- is.na(rasVeg[]) | is.na(factorValues2(rasVeg, rasVeg[], att = 1))
                                  ^~~~~~~~~~~~~
```
[R/largePatches.R:60:6:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L60) *style:* **Commented code should be removed.**
```r
    #name1a <- as.character(raster::levels(tsf)[[1]]$Factor)[tsf[][!nas]]
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:61:27:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L61) *warning:* **no visible global function definition for ‘factorValues2’**
```r
    name1 <- as.character(factorValues2(tsf, tsf[], att = 2)[!nas])
                          ^~~~~~~~~~~~~
```
[R/largePatches.R:63:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
    colID <- which(colnames(raster::levels(rasVeg)[[1]]) %in% c("category", "Factor", "VALUE"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:63:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L63) *style:* **Variable or function name should be snake_case.**
```r
    colID <- which(colnames(raster::levels(rasVeg)[[1]]) %in% c("category", "Factor", "VALUE"))
    ^~~~~
```
[R/largePatches.R:65:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L65) *style:* **Lines should not be more than 80 characters.**
```r
    #name2a <- as.character(raster::levels(rasVeg)[[1]][[colID]])[rasVeg[][!nas]]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:65:6:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L65) *style:* **Commented code should be removed.**
```r
    #name2a <- as.character(raster::levels(rasVeg)[[1]][[colID]])[rasVeg[][!nas]]
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:66:27:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L66) *warning:* **no visible global function definition for ‘factorValues2’**
```r
    name2 <- as.character(factorValues2(rasVeg, rasVeg[], att = colID)[!nas])
                          ^~~~~~~~~~~~~
```
[R/largePatches.R:72:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L72) *style:* **Lines should not be more than 80 characters.**
```r
    if (!identical(length(name1), length(name2)) || !identical(length(name1), length(name3)))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:73:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
      stop("There is something wrong with tsf or rasVeg or rasRepPoly inside LargePatches")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:76:12:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L76) *warning:* **no visible global function definition for ‘raster’, Did you mean 'rasVeg'?**
```r
    ras <- raster(rasVeg)
           ^~~~~~
```
[R/largePatches.R:77:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L77) *style:* **Variable or function name should be snake_case.**
```r
    ffFactor <- factor(ff)
    ^~~~~~~~
```
[R/largePatches.R:78:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L78) *style:* **Lines should not be more than 80 characters.**
```r
    ras[!nas] <- ffFactor # 2 seconds ## note: sum(!nas, na.rm = TRUE) should equal length(ffFactor)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:80:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L80) *style:* **Lines should not be more than 80 characters.**
```r
    areaAndPolyOut <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:80:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L80) *style:* **Variable or function name should be snake_case.**
```r
    areaAndPolyOut <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
    ^~~~~~~~~~~~~~
```
[R/largePatches.R:80:23:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L80) *warning:* **no visible global function definition for ‘Cache’**
```r
    areaAndPolyOut <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
                      ^~~~~
```
[R/largePatches.R:80:29:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L80) *warning:* **no visible binding for global variable ‘areaAndPolyValue’**
```r
    areaAndPolyOut <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
                            ^~~~~~~~~~~~~~~~
```
[R/largePatches.R:81:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L81) *style:* **Lines should not be more than 80 characters.**
```r
    eTable <- data.frame(ID = seq_along(levels(ffFactor)), VALUE = levels(ffFactor))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:81:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L81) *style:* **Variable or function name should be snake_case.**
```r
    eTable <- data.frame(ID = seq_along(levels(ffFactor)), VALUE = levels(ffFactor))
    ^~~~~~
```
[R/largePatches.R:85:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L85) *style:* **Variable or function name should be snake_case.**
```r
    facPolygonID <- factor(types[areaAndPolyOut$polyID,3])
    ^~~~~~~~~~~~
```
[R/largePatches.R:85:56:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L85) *style:* **Commas should always have a space after.**
```r
    facPolygonID <- factor(types[areaAndPolyOut$polyID,3])
                                                       ^
```
[R/largePatches.R:86:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L86) *style:* **Variable or function name should be snake_case.**
```r
    outBySpecies <- data.table(polygonID = as.numeric(facPolygonID),
    ^~~~~~~~~~~~
```
[R/largePatches.R:96:12:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L96) *warning:* **no visible global function definition for ‘raster’, Did you mean 'rasVeg'?**
```r
    ras <- raster(rasVeg)
           ^~~~~~
```
[R/largePatches.R:97:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L97) *style:* **Variable or function name should be snake_case.**
```r
    ffFactor <- factor(ff)
    ^~~~~~~~
```
[R/largePatches.R:101:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L101) *style:* **Lines should not be more than 80 characters.**
```r
    areaAndPolyOut2 <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:101:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L101) *style:* **Variable or function name should be snake_case.**
```r
    areaAndPolyOut2 <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
    ^~~~~~~~~~~~~~~
```
[R/largePatches.R:101:24:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L101) *warning:* **no visible global function definition for ‘Cache’**
```r
    areaAndPolyOut2 <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
                       ^~~~~
```
[R/largePatches.R:101:30:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L101) *warning:* **no visible binding for global variable ‘areaAndPolyValue’**
```r
    areaAndPolyOut2 <- Cache(areaAndPolyValue, ras, length = Inf) # maybe lots of NAs on edge
                             ^~~~~~~~~~~~~~~~
```
[R/largePatches.R:103:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
    eTable <- data.frame(ID = seq_along(levels(ffFactor)), VALUE = levels(ffFactor))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:103:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L103) *style:* **Variable or function name should be snake_case.**
```r
    eTable <- data.frame(ID = seq_along(levels(ffFactor)), VALUE = levels(ffFactor))
    ^~~~~~
```
[R/largePatches.R:107:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L107) *style:* **Variable or function name should be snake_case.**
```r
    facPolygonID <- factor(types[areaAndPolyOut2$polyID, 2])
    ^~~~~~~~~~~~
```
[R/largePatches.R:109:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L109) *style:* **Variable or function name should be snake_case.**
```r
    outAllSpecies <- data.table(polygonID = as.numeric(facPolygonID),
    ^~~~~~~~~~~~~
```
[R/largePatches.R:116:12:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L116) *warning:* **no visible global function definition for ‘rbindlist’**
```r
    out <- rbindlist(list(outBySpecies, outAllSpecies))
           ^~~~~~~~~
```
[R/largePatches.R:117:16:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L117) *warning:* **no visible binding for global variable ‘sizeInHa’**
```r
    out <- out[sizeInHa >= 100] # never will need patches smaller than 100 ha
               ^~~~~~~~
```
[R/largePatches.R:119:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L119) *style:* **Lines should not be more than 80 characters.**
```r
    out <- data.table(polygonID = character(), sizeInHa = numeric(), vegCover = character(),
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:120:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L120) *style:* **Lines should not be more than 80 characters.**
```r
                      rep = numeric(), ageClass = numeric(), polygonName = numeric())
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/largePatches.R:124:7:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/largePatches.R#L124) *style:* **Variable or function name should be snake_case.**
```r
      vegCover := equivalentName(vegCover, sppEquiv, sppEquivCol)]
      ^~~~~~~~
```
[R/leading.R:11:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
#' It is also recursive of passed a vector of filenames for \code{tsf} and \code{vtm}.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:13:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L13) *style:* **Lines should not be more than 80 characters.**
```r
#' @param tsf A single filename, relative or absolute, pointing to a Time Since Fire raster.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:15:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L15) *style:* **Lines should not be more than 80 characters.**
```r
#' @param vtm A single filename, relative or absolute, pointing to a Vegetation Type Map raster.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:17:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L17) *style:* **Lines should not be more than 80 characters.**
```r
#' @param poly A single \code{SpatialPolygonsDataFrame} object or a factor \code{RasterLayer}.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:19:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L19) *style:* **Lines should not be more than 80 characters.**
```r
#' @param ageClasses A character vector with labels for age classes to bin the \code{tsf} times,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:21:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L21) *style:* **Lines should not be more than 80 characters.**
```r
#' @param ageClassCutOffs A numeric vector with the endpoints for the \code{ageClasses}.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:24:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L24) *style:* **Lines should not be more than 80 characters.**
```r
#' @return A \code{data.table} with proportion of the pixels in each vegetation class,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:32:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L32) *style:* **Lines should not be more than 80 characters.**
```r
LeadingVegTypeByAgeClass <- function(tsf, vtm, poly, ageClassCutOffs, ageClasses) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:32:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L32) *style:* **Variable or function name should be snake_case.**
```r
LeadingVegTypeByAgeClass <- function(tsf, vtm, poly, ageClassCutOffs, ageClasses) {
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:32:54:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L32) *style:* **Variable or function name should be snake_case.**
```r
LeadingVegTypeByAgeClass <- function(tsf, vtm, poly, ageClassCutOffs, ageClasses) {
                                                     ^~~~~~~~~~~~~~~
```
[R/leading.R:32:71:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L32) *style:* **Variable or function name should be snake_case.**
```r
LeadingVegTypeByAgeClass <- function(tsf, vtm, poly, ageClassCutOffs, ageClasses) {
                                                                      ^~~~~~~~~~
```
[R/leading.R:34:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L34) *style:* **Variable or function name should be snake_case.**
```r
  startTime <- Sys.time()
  ^~~~~~~~~
```
[R/leading.R:36:5:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L36) *style:* **Variable or function name should be snake_case.**
```r
    ageClassCutOffs <- c(ageClassCutOffs, Inf)
    ^~~~~~~~~~~~~~~
```
[R/leading.R:42:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L42) *style:* **Variable or function name should be snake_case.**
```r
  timeSinceFireFilesRast <- raster(tsf[1])
  ^~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:42:29:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L42) *warning:* **no visible global function definition for ‘raster’, Did you mean 'rasVeg'?**
```r
  timeSinceFireFilesRast <- raster(tsf[1])
                            ^~~~~~
```
[R/leading.R:46:4:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L46) *style:* **Commented code should be removed.**
```r
  #timeSinceFireFilesRast <- Cache(rasterToMemory, tsf[1])
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:48:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L48) *style:* **Variable or function name should be snake_case.**
```r
  rasTsf <- reclassify(
  ^~~~~~
```
[R/leading.R:60:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L60) *style:* **Variable or function name should be snake_case.**
```r
  rasVeg <- raster(vtm[1])
  ^~~~~~
```
[R/leading.R:60:13:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L60) *warning:* **no visible global function definition for ‘raster’, Did you mean 'rasVeg'?**
```r
  rasVeg <- raster(vtm[1])
            ^~~~~~
```
[R/leading.R:63:1:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L63) *style:* **Lines should not be more than 80 characters.**
```r
  splitVal <- paste0("_", 75757575, "_") # unlikely to occur for any other reason
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:63:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L63) *style:* **Variable or function name should be snake_case.**
```r
  splitVal <- paste0("_", 75757575, "_") # unlikely to occur for any other reason
  ^~~~~~~~
```
[R/leading.R:69:25:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L69) *warning:* **no visible global function definition for ‘factorValues’**
```r
  name1 <- as.character(factorValues(rasTsf, rasTsf[][!nas])[, 1])
                        ^~~~~~~~~~~~
```
[R/leading.R:70:4:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L70) *style:* **Commented code should be removed.**
```r
  #as.character(raster::levels(rasTsf)[[1]]$Factor)[rasTsf[][!nas]]
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:71:25:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L71) *warning:* **no visible global function definition for ‘factorValues’**
```r
  name3 <- as.character(factorValues(rasVeg, rasVeg[][!nas])[, 1])
                        ^~~~~~~~~~~~
```
[R/leading.R:72:4:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L72) *style:* **Commented code should be removed.**
```r
  #as.character(raster::levels(rasVeg)[[1]]$Factor)[rasVeg[][!nas]]
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/leading.R:75:10:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L75) *warning:* **no visible global function definition for ‘raster’, Did you mean 'rasVeg'?**
```r
  ras <- raster(rasVeg)
         ^~~~~~
```
[R/leading.R:76:3:](https://github.com/PredictiveEcology/LandWebUtils/blob/2bc93bc848a3558fb9262fcce587ac08e7186d14/R/leading.R#L76) *style:* **Variable or function name should be snake_case.**
```r
  ffFactor <- factor(ff)
  ^~~~~~~~
```


Yep.  Thanks!  Linking here is good. Some notes:
1. I think you have a typo below, on L83 where you ``absorbError` twice rather than ```absorbError $ absorbState s foo``` (or the other order, I guess).
2. Do you also want to mention that doing the obvious instancing would lead to Orphans and that's bad?  Just because otherwise people might do that for things w/out fundeps.  Or I suppose we could leave that to the taste of the individual.  For me it was helpful to be reminded and I then fixed it for the polysemy PandocMonad effect in knit-haskell.
3. You give me too much credit!  I was persistent and I guess I realized that a type-signature of that form could work but you figured out how to get the reflection bit working even if neither of us could explain it exactly...


The script_dir was being used for the location of config files, radical_stroke.txt as well as the script unicharsets.

Since script unicharsets are now moved to the script subfolders under langdata and langdata_lstm, warning messages were printed by SetScriptProperties.

This commit adds the script subfolder before calling SetScriptProperties.


Oh, also, yes, I am "adamCS" on freenode.


just added this on the page so please do act as urgent


ok


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Successfully aliased the URL <https://react-pure-loaders-p3swpqowx.now.sh> to the following aliases.

* https://reactpureloaders.io
* https://www.reactpureloaders.io
* https://react-pure-loaders.jameswlane.now.sh
* https://react-pure-loaders-git-master.jameswlane.now.sh


To chyba moge usunąć


to też


Successfully aliased the URL <https://salted-egg-39n0adnby.now.sh> to the following aliases.

* https://salted-egg.phoomparin.now.sh
* https://salted-egg-git-master.phoomparin.now.sh


Successfully aliased the URL <https://nhatdinh-peoa2wrjt.now.sh> to the following aliases.

* https://nhatdinh.me
* https://nhatdinh.nhatldinh.now.sh
* https://nhatdinh-git-master.nhatldinh.now.sh


Does this help get votekicks to start in any way?
If it's for catbots and such, I think spamming the shit out of them would be fine, no?


My best guess is 2019-06-17 jvanverth@google.com Prefer using GrOvalOpFactory over GrFillRRect for circles and axis-aligned circular roundrects.

@jvanverth later reverted this change, though.


@Khrin I recommend to add the filter `/frndlduck-usnt-` as a generic.


Successfully aliased the URL <https://tunnckocore-template-hlgq1k1m8.now.sh> to the following aliases.

* https://tunnckocore-template.charlike.now.sh
* https://tunnckocore-template-git-master.charlike.now.sh


error message text shouldn't be about jvm options


log as debug instead of info


It is not practical here. For loops are good in Python and easy to read for people coming from other languages.


[vg CI tests](https://ucsc-ci.com/vgteam/vg/pipelines/981) complete for branch deconstruct.  View the [full report here](http://vg-data.s3.amazonaws.com/vg_ci/vgci_reports/commit/40e7d69b97ad039b35d5dd9d711ad36cc22b8763/index.html).

19 tests passed, 0 tests failed and 0 tests skipped in 13633 seconds

Tests produced 734 warnings. 734 were for lower-than-expected alignment scores


dang, you're fast! ❤


Don’t write files ... let users do screenshots or add their code.


tempConfig.exists() will always be true since it was created above


Basically,  a sample readme


`fit` -> `it`


Successfully aliased the URL <https://salted-egg-6kx0aaqep.now.sh> to the following aliases.

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TeamCity Bvcms / Build [Build 1377](https://builds.tpsdb.com/viewLog.html?buildId=6972&buildTypeId=Bvcms_Build) is now running


Successfully aliased the URL <https://tunnckocore-template-4cy838ged.now.sh> to the following aliases.

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Why did you remove this part of the readme? Is it actually safe to use this in production?


Successfully aliased the URL <https://mission-offline-nuxt-icsmduw34.now.sh> to the following aliases.

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Successfully aliased the URL <https://nhatdinh-b1xf0ho1q.now.sh> to the following aliases.

* https://nhatdinh.me
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Created multidev environment [dpworkshop#pr-15](https://dashboard.pantheon.io/sites/154fb06c-ec2e-4aca-bdaa-64d2d054b4f8#pr-15).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-15-dpworkshop.pantheonsite.io/)


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---|---|---
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Bamboo specs have been successfully imported and the following deployment projects have been updated.

|Deployment project |
----|
[Deployment test](http://bamboo.com/deploy/viewDeploymentProjectVersions.action?id=2162689)|


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://ci-526-mtcv.pantheonsite.io/)

Created multidev environment [ci-526](https://dashboard.pantheon.io/sites/ad79477c-5d06-4234-b6b8-582ebeee0e5c#ci-526) for mtcv.


@wivern - I need to rollback this change since the new reference (1.15.0-alpha) is not built on the OHDSI nexus repo.


Depois, vou analisar este codigo pra ver o que ele realmente faz.


@vasony ha jól emlékszem ezt még te kérted régebben, de most én is belefutottam ebbe egy hosszabb utcánál, így meg is csináltam. :-)


Yeah.
Or we can remove some cloning and make it a little bit more declarative / functional:
```rust
pub fn add_class(mut self, name: &str) -> Self {
        self.attrs
            .vals
            .entry(At::Class)
            .and_modify(|v| {
                if !v.is_empty() {
                    *v += " ";
                }
                *v += name;
            })
            .or_insert(name.into());
        self
    }
```
(I didn't test this ^)

And could you please add some tests for `add_class` and `replace_text`?


Looks fine.  Go ahead and remove dead code.


166817075_Issue7290 (Nigusse) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-IntegrationCoverage-Debug: OK (664 of 666 tests passed, 0 test warnings)

Failures:\n

integration Test Summary
 * Passed: 664
 * Timeout: 2

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-99.7%25-yellow.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-68.44%25-green.png)


On the one hand, you do not have to change that much every day, but on the other hand, you're welcome to look in the OpenVision area.
https://github.com/OpenVisionE2/exteplayer3
or creating an fork yourself, can not hurt either
The exteplayer3 comes but from the already long known libeplayer and will continue to be updated.
Is just something? ;-)
https://github.com/Duckbox-Developers/libstb-hal-ddt/tree/master/libeplayer3


ZEIT Now cannot deploy this project to production due to following domain related issues:

 * `zitronenstrasse.com`(for alias `zitronenstrasse.com`) is not verified yet. [Verify it](https://zeit.co/dashboard/domains?action=verify&domain=zitronenstrasse.com).


TeamCity Bvcms / Build [Build 1377](https://builds.tpsdb.com/viewLog.html?buildId=6972&buildTypeId=Bvcms_Build) outcome was **FAILURE**
Summary: Tests failed: 8, passed: 10 Build time: 00:06:43
### Failed tests
```
Test collection for IntegrationTests.Areas.Manage.AccountTests (1): IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logon_Success_Test: System.Data.SqlClient.SqlException : Invalid object name 'dbo.Families'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.ChangeDirector.StandardChangeDirector.DynamicInsert(TrackedObject item)
   at System.Data.Linq.ChangeProcessor.SubmitChanges(ConflictMode failureMode)
   at System.Data.Linq.DataContext.SubmitChanges(ConflictMode failureMode)
   at CmsData.CMSDataContext.SubmitChanges(ConflictMode failureMode) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsData\DbUtil\Context.cs:line 130
   at IntegrationTests.Support.AccountTestBase.CreateUser(Family family, String[] roles) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Support\AccountTestBase.cs:line 27
   at IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logon_Success_Test() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Areas\Manage\AccountTests.cs:line 26

Test collection for IntegrationTests.Areas.Manage.AccountTests (1): IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logon_Fail_Test: System.Data.SqlClient.SqlException : Invalid object name 'dbo.Families'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.ChangeDirector.StandardChangeDirector.DynamicInsert(TrackedObject item)
   at System.Data.Linq.ChangeProcessor.SubmitChanges(ConflictMode failureMode)
   at System.Data.Linq.DataContext.SubmitChanges(ConflictMode failureMode)
   at CmsData.CMSDataContext.SubmitChanges(ConflictMode failureMode) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsData\DbUtil\Context.cs:line 130
   at IntegrationTests.Support.AccountTestBase.CreateUser(Family family, String[] roles) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Support\AccountTestBase.cs:line 27
   at IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logon_Fail_Test() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Areas\Manage\AccountTests.cs:line 14

Test collection for IntegrationTests.Areas.Manage.AccountTests (1): IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logout_Success_Test: System.Data.SqlClient.SqlException : Invalid object name 'dbo.Families'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.ChangeDirector.StandardChangeDirector.DynamicInsert(TrackedObject item)
   at System.Data.Linq.ChangeProcessor.SubmitChanges(ConflictMode failureMode)
   at System.Data.Linq.DataContext.SubmitChanges(ConflictMode failureMode)
   at CmsData.CMSDataContext.SubmitChanges(ConflictMode failureMode) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsData\DbUtil\Context.cs:line 130
   at IntegrationTests.Support.AccountTestBase.CreateUser(Family family, String[] roles) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Support\AccountTestBase.cs:line 27
   at IntegrationTests.Areas.Manage.AccountTests.MyData_User_Logout_Success_Test() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Areas\Manage\AccountTests.cs:line 39

Test collection for IntegrationTests.Areas.Manage.AccountTests (1): IntegrationTests.Areas.Manage.AccountTests.MyData_User_ChangePassword_Test: System.Data.SqlClient.SqlException : Invalid object name 'dbo.Families'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.ChangeDirector.StandardChangeDirector.DynamicInsert(TrackedObject item)
   at System.Data.Linq.ChangeProcessor.SubmitChanges(ConflictMode failureMode)
   at System.Data.Linq.DataContext.SubmitChanges(ConflictMode failureMode)
   at CmsData.CMSDataContext.SubmitChanges(ConflictMode failureMode) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsData\DbUtil\Context.cs:line 130
   at IntegrationTests.Support.AccountTestBase.CreateUser(Family family, String[] roles) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Support\AccountTestBase.cs:line 27
   at IntegrationTests.Areas.Manage.AccountTests.MyData_User_ChangePassword_Test() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\IntegrationTests\Areas\Manage\AccountTests.cs:line 51

Database collection (1): CMSWebTests.QueryModelTests.Should_be_able_to_parse_and_execute_querycode: System.Data.SqlClient.SqlException : Invalid object name 'dbo.Query'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.DataQuery`1.System.Collections.Generic.IEnumerable<T>.GetEnumerator()
   at System.Collections.Generic.List`1..ctor(IEnumerable`1 collection)
   at System.Linq.Enumerable.ToList[TSource](IEnumerable`1 source)
   at CmsData.CMSDataContext.ScratchPadCondition() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsData\QueryBuilder\QueryContext.cs:line 28
   at CmsWeb.Areas.Search.Models.QueryModel.QueryCode(CMSDataContext db, String code) in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\CmsWeb\Areas\Search\Models\Query\Model\QueryViewModel.cs:line 15
   at CMSWebTests.QueryModelTests.Should_be_able_to_parse_and_execute_querycode() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\UnitTests\CMSWebTests\Code\QueryModelTests.cs:line 17

Database collection (1): CMSWebTests.CodeValueModelTests.Should_be_able_to_get_MemberTypeCodes: System.Data.SqlClient.SqlException : Invalid object name 'lookup.MemberType'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.DataQuery`1.System.Collections.Generic.IEnumerable<T>.GetEnumerator()
   at System.Linq.Enumerable.WhereSelectEnumerableIterator`2.MoveNext()
   at System.Linq.Enumerable.Count[TSource](IEnumerable`1 source)
   at CMSWebTests.CodeValueModelTests.Should_be_able_to_get_MemberTypeCodes() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\UnitTests\CMSWebTests\Code\CodeValueModelTests.cs:line 32

Database collection (1): CMSWebTests.CodeValueModelTests.Should_be_able_to_get_BundleStatusTypes: System.Data.SqlClient.SqlException : Invalid object name 'lookup.BundleStatusTypes'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.DataQuery`1.System.Collections.Generic.IEnumerable<T>.GetEnumerator()
   at System.Linq.Enumerable.Count[TSource](IEnumerable`1 source)
   at CMSWebTests.CodeValueModelTests.Should_be_able_to_get_BundleStatusTypes() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\UnitTests\CMSWebTests\Code\CodeValueModelTests.cs:line 17

Database collection (1): CMSWebTests.CodeValueModelTests.Should_be_able_to_get_ContactReasonCodes: System.Data.SqlClient.SqlException : Invalid object name 'lookup.ContactReason'.
   at System.Data.SqlClient.SqlConnection.OnError(SqlException exception, Boolean breakConnection, Action`1 wrapCloseInAction)
   at System.Data.SqlClient.TdsParser.ThrowExceptionAndWarning(TdsParserStateObject stateObj, Boolean callerHasConnectionLock, Boolean asyncClose)
   at System.Data.SqlClient.TdsParser.TryRun(RunBehavior runBehavior, SqlCommand cmdHandler, SqlDataReader dataStream, BulkCopySimpleResultSet bulkCopyHandler, TdsParserStateObject stateObj, Boolean& dataReady)
   at System.Data.SqlClient.SqlDataReader.TryConsumeMetaData()
   at System.Data.SqlClient.SqlDataReader.get_MetaData()
   at System.Data.SqlClient.SqlCommand.FinishExecuteReader(SqlDataReader ds, RunBehavior runBehavior, String resetOptionsString, Boolean isInternal, Boolean forDescribeParameterEncryption, Boolean shouldCacheForAlwaysEncrypted)
   at System.Data.SqlClient.SqlCommand.RunExecuteReaderTds(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, Boolean async, Int32 timeout, Task& task, Boolean asyncWrite, Boolean inRetry, SqlDataReader ds, Boolean describeParameterEncryptionRequest)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method, TaskCompletionSource`1 completion, Int32 timeout, Task& task, Boolean& usedCache, Boolean asyncWrite, Boolean inRetry)
   at System.Data.SqlClient.SqlCommand.RunExecuteReader(CommandBehavior cmdBehavior, RunBehavior runBehavior, Boolean returnStream, String method)
   at System.Data.SqlClient.SqlCommand.ExecuteReader(CommandBehavior behavior, String method)
   at System.Data.Linq.SqlClient.SqlProvider.Execute(Expression query, QueryInfo queryInfo, IObjectReaderFactory factory, Object[] parentArgs, Object[] userArgs, ICompiledSubQuery[] subQueries, Object lastResult)
   at System.Data.Linq.SqlClient.SqlProvider.ExecuteAll(Expression query, QueryInfo[] queryInfos, IObjectReaderFactory factory, Object[] userArguments, ICompiledSubQuery[] subQueries)
   at System.Data.Linq.SqlClient.SqlProvider.System.Data.Linq.Provider.IProvider.Execute(Expression query)
   at System.Data.Linq.DataQuery`1.System.Collections.Generic.IEnumerable<T>.GetEnumerator()
   at System.Linq.Enumerable.Count[TSource](IEnumerable`1 source)
   at CMSWebTests.CodeValueModelTests.Should_be_able_to_get_ContactReasonCodes() in C:\TeamCity\buildAgent\work\de2c4e6ef697cb99\UnitTests\CMSWebTests\Code\CodeValueModelTests.cs:line 25

```


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@ipuustin  It seems like a good patch, why it's not upstream?


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