Successfully aliased the URL <https://ae-icons-component-fovo7lu5k.now.sh> to the following aliases.

* https://ae-icons-component.adaept.now.sh
* https://ae-icons-component-git-master.adaept.now.sh


🔥 Device tests completed (Failed) on iOS on [Azure DevOps](https://dev.azure.com/devdiv/DevDiv/_build/index?buildId=2785228)(iOS): [Html Report](http://xamarin-storage/jenkins/xamarin-macios/d16-3/3d04d18c48d119282d0d2a3f61cb6c4b470240af/2785228/device-tests/jenkins-results/tests/index.html) 🔥

# Test results

<details>
<summary>5 tests failed, 108 tests passed.</summary>

## Failed tests

 * [NUnit] Mono BCL tests group 1/iOS Unified 64-bits - device/Debug: TimedOut (HE0041: Error while processing device notifications from fff50:32:37:a1:c8:31fff (0x7fca41445020): Failed to communicate with the device. Please ensure the cable is properly connected, and try rebooting the device (error: 0xe8000065 kAMDMuxConnectError))
 * [NUnit] Mono BCL tests group 2/iOS Unified 64-bits - device/Debug: Failed (HE0041: Error while processing device notifications from fff50:32:37:a1:c8:31fff (0x7fb679b28940): Failed to communicate with the device. Please ensure the cable is properly connected, and try rebooting the device (error: 0xe8000065 kAMDMuxConnectError))
 * [NUnit] Mono BCL tests group 1/iOS Unified 64-bits - device/AssemblyBuildTarget: dylib (debug): TimedOut (HE0041: Error while processing device notifications from fff50:32:37:a1:c8:31fff (0x7f885fd82c50): Failed to communicate with the device. Please ensure the cable is properly connected, and try rebooting the device (error: 0xe8000065 kAMDMuxConnectError))
 * [NUnit] Mono BCL tests group 2/iOS Unified 64-bits - device/AssemblyBuildTarget: SDK framework (debug, profiling): Failed (HE0041: Error while processing device notifications from fff50:32:37:a1:c8:31fff (0x7f89a8619b70): Failed to communicate with the device. Please ensure the cable is properly connected, and try rebooting the device (error: 0xe8000065 kAMDMuxConnectError))
 * mscorlib/iOS Unified 64-bits - device/Release: Failed (HE0041: Error while processing device notifications from fff50:32:37:a1:c8:31fff (0x7f81e80c39e0): Failed to communicate with the device. Please ensure the cable is properly connected, and try rebooting the device (error: 0xe8000065 kAMDMuxConnectError))
</details>


rimraf


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Successfully aliased the URL <https://nextjs-buttercms-b1o44wqv9.now.sh> to the following aliases.

* https://nextjs-buttercms.now.sh
* https://nextjs-buttercms.msweeneydev.now.sh
* https://nextjs-buttercms-git-master.msweeneydev.now.sh


npm install


Successfully aliased the URL <https://small-motions-me9bdf2rp.now.sh> to the following aliases.

* https://rob.co.bb
* https://small-motions.robcobb.now.sh
* https://small-motions-git-master.robcobb.now.sh


This code was changed to using only shell script in the latest version on the mailing list.


@lilienbm


GSHP_desuperheater (yzhou601) - x86_64-Linux-Ubuntu-18.04-cppcheck: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


Successfully aliased the URL <https://pablopink-iqkqnyrf8.now.sh> to the following aliases.

* https://pablo.life
* https://pablovarela.es
* https://pablo.pink
* https://pablopink.pablopunk.now.sh
* https://pablopink-git-master.pablopunk.now.sh


GSHP_desuperheater (yzhou601) - x86_64-Linux-Ubuntu-18.04-custom_check: OK (9 of 9 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


TeamCity Bvcms / Build [Build 1369](https://builds.tpsdb.com/viewLog.html?buildId=6852&buildTypeId=Bvcms_Build) outcome was **SUCCESS**
Summary: Running Build time: 00:08:06


Successfully aliased the URL <https://qa-front-end-service-1dbouunjt.now.sh> to the following aliases.

* https://qa-front-end-service.dloft9.now.sh
* https://qa-front-end-service-git-master.dloft9.now.sh


it is more like several hours of releasing new stable patch versions. couldnt it be done by some warning instead?
THX


Oh confusion. Look in NGramFilterFactory, you’ll see a line:
preserveOriginal = getBoolean(args, "keepShortTerm", NGramTokenFilter.DEFAULT_PRESERVE_ORIGINAL);

Uh, “keepShortTerm”?

Please raise a JIRA for this. I don’t see “keepShortTerm” in the docs anywyere. When you do, please point out where you saw it reference for this filter. I don’t see it at all in the docs.

See LUCENE=7960

And to make it even more “interesting”, EdgeNGramTokenFilter has “preserveOriginal” .vs. “keepShortTerm”. IDK whether this is intentional or not. It’s at least worth documenting in the ref guide if it is.

Erick

> On Jun 20, 2019, at 3:28 PM, Jesse Tane <notifications@github.com> wrote:
>
> Just downloaded the source for 8.1.1 from https://www.apache.org/dyn/closer.lua/lucene/solr/8.1.1/solr-8.1.1-src.tgz and it does seem like it's here, weird.
>
> $ grep preserveOriginal analysis/common/src/java/org/apache/lucene/analysis/ngram/NGramTokenFilter.java
>   private final boolean preserveOriginal;
>    * @param preserveOriginal Whether or not to keep the original term when it
>   public NGramTokenFilter(TokenStream input, int minGram, int maxGram, boolean preserveOriginal) {
>     this.preserveOriginal = preserveOriginal;
>         if (preserveOriginal && curTermCodePointCount < minGram) {
>       else if (preserveOriginal && curTermCodePointCount > maxGram) {
>
> —
> You are receiving this because you commented.
> Reply to this email directly, view it on GitHub, or mute the thread.
>


No category means that it is a core module (should show up in the top-level module list), so this logic should be fixed. This logic error has not caused any issues because core modules (such as Volumes) insert an empty string in the category list (https://github.com/Slicer/Slicer/blob/master/Modules/Loadable/Volumes/qSlicerVolumesModule.cxx#L117).


@smed79  i think...you need to change `0.0.0.0` to `||` here (assuming that this part of your lists is for the adblocker)


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**and more.


Successfully aliased the URL <https://reddex-outwc2q8q.now.sh> to the following aliases.

* https://reddex.app
* https://reddex.tychambers3.now.sh
* https://reddex-git-master.tychambers3.now.sh


Successfully aliased the URL <https://jobify-5vpbxeies.now.sh> to the following aliases.

* https://jobify.andreluialves.now.sh
* https://jobify-git-master.andreluialves.now.sh


Successfully aliased the URL <https://jobify-d07vpwpwv.now.sh> to the following aliases.

* https://jobify.andreluialves.now.sh
* https://jobify-git-master.andreluialves.now.sh


Marker for #140


## Jenkins Build Summary

Built from [this commit](https://github.com/scottschurr/rippled/commit/426b074e979f13bb9981ad602ec331e4e1824b59)

Built at __20190620 - 22:58:50__

### Test Results

Build Type | Log | Result | Status
---------- | --- | ------ | ------
msvc.Debug | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/msvc.Debug.txt) | 1194 cases, 0 failed, t: 575s | PASS :white_check_mark:
gcc.Release
-Dassert=ON,
MANUAL_TESTS=true | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Release_Dassert_ON_MANUAL_TESTS_true.txt) | 951 cases, 0 failed, t: 4m54s | PASS :white_check_mark:
docs,
TARGET=docs | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/docs_TARGET_docs.txt) | 1 cases, 0 failed, t: 0m1s | PASS :white_check_mark:
gcc.Debug
-Dcoverage=ON,
TARGET=coverage_report,
SKIP_TESTS=true | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug_Dcoverage_ON_TARGET_coverage_report_SKIP_TESTS_true.txt) | 1194 cases, 0 failed, t: 16m53s | PASS :white_check_mark:
clang.Debug | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/clang.Debug.txt) | 1194 cases, 0 failed, t: 2m49s | PASS :white_check_mark:
msvc.Debug,
NINJA_BUILD=true | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/msvc.Debug_NINJA_BUILD_true.txt) | 1194 cases, 0 failed, t: 599s | PASS :white_check_mark:
gcc.Debug | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug.txt) | 1194 cases, 0 failed, t: 2m54s | PASS :white_check_mark:
clang.Debug
-Dunity=OFF | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/clang.Debug_Dunity_OFF.txt) | 1193 cases, 0 failed, t: 9m42s | PASS :white_check_mark:
clang.Release
-Dassert=ON | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/clang.Release_Dassert_ON.txt) | 1194 cases, 0 failed, t: 4m44s | PASS :white_check_mark:
gcc.Debug
-Dunity=OFF | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug_Dunity_OFF.txt) | 1193 cases, 0 failed, t: 11m7s | PASS :white_check_mark:
msvc.Debug
-Dunity=OFF | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/msvc.Debug_Dunity_OFF.txt) | 1193 cases, 0 failed, t: 1113s | PASS :white_check_mark:
gcc.Release
-Dassert=ON | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Release_Dassert_ON.txt) | 1194 cases, 0 failed, t: 4m51s | PASS :white_check_mark:
gcc.Debug
-Dstatic=OFF | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug_Dstatic_OFF.txt) | 1194 cases, 0 failed, t: 2m54s | PASS :white_check_mark:
msvc.Release | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/msvc.Release.txt) | 1194 cases, 0 failed, t: 402s | PASS :white_check_mark:
gcc.Debug
-Dstatic=OFF -DBUILD_SHARED_LIBS=ON | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug_Dstatic_OFF_DBUILD_SHARED_LIBS_ON.txt) | 1194 cases, 0 failed, t: 2m51s | PASS :white_check_mark:
gcc.Debug,
NINJA_BUILD=true | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/gcc.Debug_NINJA_BUILD_true.txt) | 1194 cases, 0 failed, t: 2m47s | PASS :white_check_mark:
clang.Debug
-Dunity=OFF -Dsan=address,
PARALLEL_TESTS=false,
DEBUGGER=false | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/clang.Debug_Dunity_OFF_Dsan_address_PARALLEL_TESTS_false_DEBUGGER_false.txt) | 1193 cases, 0 failed, t: 9m59s | PASS :white_check_mark:
clang.Debug
-Dunity=OFF -Dsan=undefined,
PARALLEL_TESTS=false | [logfile](http://ci.ops.ripple.com/job/scott-schurr-rippled/job/ticket-batch/18//artifact/clang.Debug_Dunity_OFF_Dsan_undefined_PARALLEL_TESTS_false.txt) | 1193 cases, 0 failed, t: 11m36s | PASS :white_check_mark:


Successfully aliased the URL <https://jobify-huekkme50.now.sh> to the following aliases.

* https://jobify.andreluialves.now.sh
* https://jobify-git-master.andreluialves.now.sh


hmm nice edit 🍡


peanut butter is dank


This approx_neb_wf_parts.py file ended up being more of a scratch work file before I created separate files for the fireworks and firetasks being created. I plan on removing it in the end.


You are pushing commits at a very fast pace (accross the whole organization).
Due to that, we cannot deploy the commit 2a90f4345173fd996e3f30085cee4e018e948031.

You can try again later or [upgrade](https://zeit.co/account/plan) your plan.


No this is not correct, the way it was written before was correct.  The exception will bubble up to the save method.


@michalkurka copy/paste typo here.


The older style here is actually more legible, no?


Hah, nice catch. Had to step out but I'll take a closer look tomorrow. Thanks for the help.

> On Jun 20, 2019, at 18:53, Erick Erickson <notifications@github.com> wrote:
>
> Oh confusion. Look in NGramFilterFactory, you’ll see a line:
> preserveOriginal = getBoolean(args, "keepShortTerm", NGramTokenFilter.DEFAULT_PRESERVE_ORIGINAL);
>
> Uh, “keepShortTerm”?
>
> Please raise a JIRA for this. I don’t see “keepShortTerm” in the docs anywyere. When you do, please point out where you saw it reference for this filter. I don’t see it at all in the docs.
>
> See LUCENE=7960
>
> And to make it even more “interesting”, EdgeNGramTokenFilter has “preserveOriginal” .vs. “keepShortTerm”. IDK whether this is intentional or not. It’s at least worth documenting in the ref guide if it is.
>
> Erick
>
> > On Jun 20, 2019, at 3:28 PM, Jesse Tane <notifications@github.com> wrote:
> >
> > Just downloaded the source for 8.1.1 from https://www.apache.org/dyn/closer.lua/lucene/solr/8.1.1/solr-8.1.1-src.tgz and it does seem like it's here, weird.
> >
> > $ grep preserveOriginal analysis/common/src/java/org/apache/lucene/analysis/ngram/NGramTokenFilter.java
> > private final boolean preserveOriginal;
> > * @param preserveOriginal Whether or not to keep the original term when it
> > public NGramTokenFilter(TokenStream input, int minGram, int maxGram, boolean preserveOriginal) {
> > this.preserveOriginal = preserveOriginal;
> > if (preserveOriginal && curTermCodePointCount < minGram) {
> > else if (preserveOriginal && curTermCodePointCount > maxGram) {
> >
> > —
> > You are receiving this because you commented.
> > Reply to this email directly, view it on GitHub, or mute the thread.
> >
>
> —
> You are receiving this because you commented.
> Reply to this email directly, view it on GitHub, or mute the thread.


I disagree...I like the use of prefixed tables...both helps avoid variable clobbering & also improves readability


hmm, again, I prefer the original style which is consistent elsewhere


Signed-off-by: Torsten Markwardt <tmarkwardt@marsoftware.de>


ior=0.92 gives F0=0.04 which according to some tutorials is good approximation of dieletrics, that's where my 0.92 comes from. I didnt have problmes with seeing diffuse on this value


🔥 Device tests completed (Failed) on TvOS-Beta on [Azure DevOps](https://dev.azure.com/devdiv/DevDiv/_build/index?buildId=2787094)(TvOS-Beta): [Html Report](http://xamarin-storage/jenkins/xamarin-macios/xcode11/ee2d0458de6bcd584a4dc4e19622c5d8d5f4a641/2787094/device-tests/jenkins-results/tests/index.html) 🔥

# Test results

230 tests' device not found, 0 tests passed.


Successfully aliased the URL <https://messenger-r6l9het59.now.sh> to the following aliases.

* https://messenger.bludington.now.sh
* https://messenger-git-master.bludington.now.sh


tex viewer is part of the gui... so yeah. But im not sure i got you right


yes


ScheduleManagerRefactor (Myoldmopar) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-UnitTestsCoverage-Debug: OK (1120 of 1120 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-42.25%25-green.png)


А зачем этот ридер здесь? У тебя же есть метод type, который, по сути, и является ридером


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Created multidev environment [sfgov#pr-315](https://dashboard.pantheon.io/sites/91d50373-c4cf-40e4-a646-cb73e16a140c#pr-315).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-315-sfgov.pantheonsite.io/)


166827553_Issue7318 (Myoldmopar) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-IntegrationCoverage-Debug: OK (663 of 663 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-68.46%25-green.png)


Successfully aliased the URL <https://ae-icons-component-45dvha808.now.sh> to the following aliases.

* https://ae-icons-component.adaept.now.sh
* https://ae-icons-component-git-master.adaept.now.sh


solid stuff


![Screenshot from 2019-06-21 04-51-13](https://user-images.githubusercontent.com/3508305/59887366-b9c28080-93e0-11e9-90fc-3e4459f11f0a.png)
Vector isn't pixelating on zooming, while png is.


Did you manage to use the mixin anywhere?  Also, while it would work, it is better to instantiate the mixin with parentheses.


this is a place where you could use nesting


Ily


test


GSHP_desuperheater (yzhou601) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-UnitTestsCoverage-Debug: OK (1113 of 1113 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-42.35%25-green.png)


[R/assertions.R:208:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/assertions.R#L208) *style:* **Lines should not be more than 100 characters.**
```r
      stop("2 or more species share the same label under the 'EN_generic_short' or 'Leading' columns of sim$sppEquiv.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/assertions.R:212:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/assertions.R#L212) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/cohorts.R:46:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L46) *style:* **Lines should not be more than 100 characters.**
```r
#' @param treedFirePixelTableSinceLastDisp A data.table with at least 2 columns, \code{pixelIndex} and \code{pixelGroup}.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:67:48:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L67) *style:* **Variable and function names should not be longer than 30 characters.**
```r
                             speciesEcoregion, treedFirePixelTableSinceLastDisp = NULL,
                                               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:88:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L88) *style:* **Lines should not be more than 100 characters.**
```r
      message(crayon::green("  Regenerating only open pixels (e.g., likely resprouting & serotiny only)"))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:89:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L89) *style:* **Lines should not be more than 100 characters.**
```r
    columnsForPG <- c("ecoregionGroup", "speciesCode", "age") # no Biomass because they all have zero
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:90:31:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L90) *style:* **Commas should always have a space after.**
```r
    cd <- newPixelCohortData[,c("pixelIndex", columnsForPG), with = FALSE]
                              ^
```
[R/cohorts.R:118:30:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L118) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    allCohortData <- cohorts[ , .(ecoregionGroup = ecoregionGroup[1],
                             ^
```
[R/cohorts.R:118:31:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L118) *style:* **Commas should never have a space before.**
```r
    allCohortData <- cohorts[ , .(ecoregionGroup = ecoregionGroup[1],
                             ~^
```
[R/cohorts.R:141:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L141) *style:* **Commented code should be removed.**
```r
  # newPixelCohortData[, sumB := sum(B, na.rm = TRUE), by = pixelGroup]
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:217:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L217) *style:* **Variable or function name should be lowerCamelCase.**
```r
  specieseco_current <- speciesEcoregionLatestYear(speciesEcoregion, time)
  ^~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:218:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L218) *style:* **Variable or function name should be lowerCamelCase.**
```r
  specieseco_current <- setkey(specieseco_current[, .(speciesCode, maxANPP, maxB, ecoregionGroup)],
  ^~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:223:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L223) *style:* **Lines should not be more than 100 characters.**
```r
  #missingNewPixelCohortData <- newPixelCohortData[!specieseco_current, on = uniqueSpeciesEcoregionDefinition]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:223:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L223) *style:* **Commented code should be removed.**
```r
  #missingNewPixelCohortData <- newPixelCohortData[!specieseco_current, on = uniqueSpeciesEcoregionDefinition]
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:224:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L224) *style:* **Variable or function name should be lowerCamelCase.**
```r
  specieseco_current <- specieseco_current[!is.na(maxB)]
  ^~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:225:24:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L225) *style:* **Variable or function name should be lowerCamelCase.**
```r
  specieseco_current[, maxB_eco := max(maxB), by = ecoregionGroup]
                       ^~~~~~~~
```
[R/cohorts.R:226:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L226) *style:* **Lines should not be more than 100 characters.**
```r
  newPixelCohortData <- specieseco_current[newPixelCohortData, on = uniqueSpeciesEcoregionDefinition]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:232:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L232) *style:* **Commented code should be removed.**
```r
  # set(newPixelCohortData, NULL, "sumB", 0L)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:239:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L239) *style:* **Lines should not be more than 100 characters.**
```r
  set(newPixelCohortData, which(is.na(newPixelCohortData$oldSumB)), "oldSumB", 0)   ## faster than [:=]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:244:26:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L244) *style:* **Variable or function name should be lowerCamelCase.**
```r
    newPixelCohortData[, B := NULL]
                         ^
```
[R/cohorts.R:248:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L248) *style:* **Lines should not be more than 100 characters.**
```r
  set(newPixelCohortData, NULL, "B", asInteger(pmin(newPixelCohortData$maxANPP, newPixelCohortData$B)))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:254:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L254) *style:* **Lines should not be more than 100 characters.**
```r
    if (isTRUE(NROW(unique(newPixelCohortData, by = uniqueCohortDefinition)) != NROW(newPixelCohortData)))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:259:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L259) *style:* **Commented code should be removed.**
```r
  # cohortData[, sumB := sum(B, na.rm = TRUE), by = "pixelGroup"]  ## recalculate sumB
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:261:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L261) *style:* **Commented code should be removed.**
```r
  #   set(cohortData, NULL, "sumB", asInteger(cohortData[["sumB"]]))
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:292:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L292) *style:* **Lines should not be more than 100 characters.**
```r
  pgsStillInCDGoneFromPGM <- cohortData[whPgsStillInCDGoneFromPGM,] #setdiff(unique(cohortData$pixelGroup), unique(pgmVals$pixelGroup))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:292:67:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L292) *style:* **Commas should always have a space after.**
```r
  pgsStillInCDGoneFromPGM <- cohortData[whPgsStillInCDGoneFromPGM,] #setdiff(unique(cohortData$pixelGroup), unique(pgmVals$pixelGroup))
                                                                  ^
```
[R/cohorts.R:292:70:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L292) *style:* **Commented code should be removed.**
```r
  pgsStillInCDGoneFromPGM <- cohortData[whPgsStillInCDGoneFromPGM,] #setdiff(unique(cohortData$pixelGroup), unique(pgmVals$pixelGroup))
                                                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:293:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L293) *style:* **Commented code should be removed.**
```r
  #pgsStillInPGMGoneFromCD <- setdiff(unique(pgmVals$pixelGroup), unique(cohortData$pixelGroup))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:295:64:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L295) *style:* **Commas should always have a space after.**
```r
  pgsStillInPGMGoneFromCD <- pgmVals[whPgsStillInPGMGoneFromCD,]
                                                               ^
```
[R/cohorts.R:346:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L346) *style:* **Lines should not be more than 100 characters.**
```r
  # concatenate within rows -- e.g., ecoregionCode_speciesCode_age_biomass or 647_11_Abie_sp_100_2000
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:350:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L350) *style:* **Lines should not be more than 100 characters.**
```r
  pcd[ , c("uniqueComboByPixelIndex") := paste(uniqueComboByRow, collapse = "__"), by = "pixelIndex"]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:350:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L350) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  pcd[ , c("uniqueComboByPixelIndex") := paste(uniqueComboByRow, collapse = "__"), by = "pixelIndex"]
      ^
```
[R/cohorts.R:350:8:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L350) *style:* **Commas should never have a space before.**
```r
  pcd[ , c("uniqueComboByPixelIndex") := paste(uniqueComboByRow, collapse = "__"), by = "pixelIndex"]
      ~^
```
[R/cohorts.R:351:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L351) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  pcd[ , c("pixelGroup") := as.integer(maxPixelGroup) + as.integer(factor(uniqueComboByPixelIndex))]
      ^
```
[R/cohorts.R:351:8:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L351) *style:* **Commas should never have a space before.**
```r
  pcd[ , c("pixelGroup") := as.integer(maxPixelGroup) + as.integer(factor(uniqueComboByPixelIndex))]
      ~^
```
[R/cohorts.R:353:38:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L353) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (getOption("LandR.assertions")) { # old algorithm
                                     ^
```
[R/cohorts.R:357:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L357) *style:* **Lines should not be more than 100 characters.**
```r
    pcd[, pixelGroup2 := mapvalues(pixelGroup, from = unique(pixelGroup), to = as.character(seq_along(unique(pixelGroup))))]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:363:12:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L363) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    pcdOld[ , c(columns2) := lapply(.SD, function(x) {
           ^
```
[R/cohorts.R:363:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L363) *style:* **Commas should never have a space before.**
```r
    pcdOld[ , c(columns2) := lapply(.SD, function(x) {
           ~^
```
[R/cohorts.R:367:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L367) *style:* **Lines should not be more than 100 characters.**
```r
    # concatenate within rows -- e.g., ecoregionCode_speciesCode_age_biomass or 647_11_Abie_sp_100_2000
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:368:52:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L368) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    pcdOld[, uniqueComboByRow := as.integer(factor( do.call(paste, as.list(.SD)))),
                                                   ^
```
[R/cohorts.R:372:12:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L372) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    pcdOld[ , c("uniqueComboByPixelIndex") := paste(uniqueComboByRow, collapse = "__"),
           ^
```
[R/cohorts.R:372:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L372) *style:* **Commas should never have a space before.**
```r
    pcdOld[ , c("uniqueComboByPixelIndex") := paste(uniqueComboByRow, collapse = "__"),
           ~^
```
[R/cohorts.R:374:12:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L374) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    pcdOld[ , c("pixelGroup") := as.integer(maxPixelGroup) +
           ^
```
[R/cohorts.R:374:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L374) *style:* **Commas should never have a space before.**
```r
    pcdOld[ , c("pixelGroup") := as.integer(maxPixelGroup) +
           ~^
```
[R/cohorts.R:379:25:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L379) *style:* **Put spaces around all infix operators.**
```r
    pcdOld[, pixelGroup2:=mapvalues(pixelGroup, from = unique(pixelGroup),
                       ~^~~
```
[R/cohorts.R:424:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L424) *style:* **Variable and function names should not be longer than 30 characters.**
```r
uniqueSpeciesEcoregionDefinition <- c("speciesCode", "ecoregionGroup")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:435:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L435) *style:* **Lines should not be more than 100 characters.**
```r
  message(magenta("Pixels with non-NA cover:, ", cohortData[!is.na(cover), length(unique(pixelIndex))]))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:443:86:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L443) *style:* **Put spaces around all infix operators.**
```r
    pixelsZero <- NROW(cohortData[, all(get(val) == 0), by = "pixelIndex"][get("V1") ==TRUE])
                                                                                ^~~
```
[R/cohorts.R:444:40:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L444) *style:* **Commas should always have a space after.**
```r
    message(magenta("Pixels with all(",val," == 0): ", format(pixelsZero, big.mark = ",")))
                                       ^
```
[R/cohorts.R:444:44:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L444) *style:* **Commas should always have a space after.**
```r
    message(magenta("Pixels with all(",val," == 0): ", format(pixelsZero, big.mark = ",")))
                                           ^
```
[R/cohorts.R:445:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L445) *style:* **Lines should not be more than 100 characters.**
```r
    pixelsBiomassNonZero <- NROW(cohortData[, any(get(val) > 0), by = "pixelIndex"][get("V1") ==TRUE])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:445:95:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L445) *style:* **Put spaces around all infix operators.**
```r
    pixelsBiomassNonZero <- NROW(cohortData[, any(get(val) > 0), by = "pixelIndex"][get("V1") ==TRUE])
                                                                                ^~~
```
[R/cohorts.R:446:40:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L446) *style:* **Commas should always have a space after.**
```r
    message(magenta("Pixels with all(",val," > 0): ", format(pixelsBiomassNonZero, big.mark = ",")))
                                       ^
```
[R/cohorts.R:446:44:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L446) *style:* **Commas should always have a space after.**
```r
    message(magenta("Pixels with all(",val," > 0): ", format(pixelsBiomassNonZero, big.mark = ",")))
                                           ^
```
[R/cohorts.R:447:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L447) *style:* **Lines should not be more than 100 characters.**
```r
    out <- list(pixelsNA = pixelsNA, pixelsZero = pixelsZero, pixelsBiomassNonZero = pixelsBiomassNonZero)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:508:32:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L508) *style:* **Variable or function name should be lowerCamelCase.**
```r
                               availableERC_by_Sp, theUnwantedPixels,
                               ^~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:520:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L520) *style:* **Variable or function name should be lowerCamelCase.**
```r
      availableERC_by_Sp <- as.data.table(availableERC_by_Sp)
      ^~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:544:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L544) *style:* **Commented code should be removed.**
```r
  #   numChar <- max(nchar(availableERC_by_Sp$initialEcoregionCode), na.rm = TRUE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:546:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L546) *style:* **Lines should not be more than 100 characters.**
```r
  #                      initialEcoregionCode := paste0("1_", paddedFloatToChar(as.integer(initialEcoregionCode), numChar))]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:550:16:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L550) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if (FALSE) { # This is old section... can be deleted soon (April 10, 2019, Eliot)
               ^
```
[R/cohorts.R:565:8:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L565) *style:* **Commented code should be removed.**
```r
    #  stop("values of 34 and 35 on pixelCohortData and sim$LCC2005 don't match")
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:594:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L594) *style:* **Lines should not be more than 100 characters.**
```r
    out <- out[initialPixels != pixels] # rm pixels which are same as initialPixels --> these are known wrong
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:597:42:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L597) *style:* **Put spaces around all infix operators.**
```r
    out[lcc %in% c(classesToReplace), lcc:=NA]
                                        ~^~~
```
[R/cohorts.R:600:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L600) *style:* **Lines should not be more than 100 characters.**
```r
                               on = c("pixelIndex" = "initialPixels"), nomatch = NA] # join the availableERC_by_Sp which has initialEcoregionCode
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:604:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L604) *style:* **Lines should not be more than 100 characters.**
```r
                               paddedFloatToChar(as.integer(lcc), padL = numCharLCCCodes, padR = 0))]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:608:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L608) *style:* **Lines should not be more than 100 characters.**
```r
    out7 <- out5[availableERG2, on = c("speciesCode", "possERC" = "initialEcoregionCode"), nomatch = NA]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:658:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L658) *style:* **Commented code should be removed.**
```r
    # setnames(out3, c("initialPixels", "initialEcoregionCode"), c("pixelIndex", "ecoregionGroup"))
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:660:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L660) *style:* **Commented code should be removed.**
```r
    # out3 <- unique(out3, by = c("pixelIndex", "ecoregionGroup"))
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:683:6:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L683) *style:* **Commented code should be removed.**
```r
    #describeCohortData(cohortData)
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:692:16:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L692) *style:* **Variable or function name should be lowerCamelCase.**
```r
  cohortData[, V1 := NULL]
               ^~
```
[R/cohorts.R:697:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L697) *style:* **Commented code should be removed.**
```r
  # cohortData[speciesCode == "Popu_sp", cover := asInteger(cover / 2)]
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:699:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L699) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  cohortData[ , cover := {
             ^
```
[R/cohorts.R:699:15:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L699) *style:* **Commas should never have a space before.**
```r
  cohortData[ , cover := {
             ~^
```
[R/cohorts.R:711:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L711) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  cohortData[ , B := mean(totalBiomass) * cover / 100, by = "pixelIndex"]
             ^
```
[R/cohorts.R:711:15:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L711) *style:* **Commas should never have a space before.**
```r
  cohortData[ , B := mean(totalBiomass) * cover / 100, by = "pixelIndex"]
             ~^
```
[R/cohorts.R:711:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L711) *style:* **Variable or function name should be lowerCamelCase.**
```r
  cohortData[ , B := mean(totalBiomass) * cover / 100, by = "pixelIndex"]
                ^
```
[R/cohorts.R:713:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L713) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  cohortData[ , B := ceiling(B / pixelGroupBiomassClass) * pixelGroupBiomassClass]
             ^
```
[R/cohorts.R:713:15:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L713) *style:* **Commas should never have a space before.**
```r
  cohortData[ , B := ceiling(B / pixelGroupBiomassClass) * pixelGroupBiomassClass]
             ~^
```
[R/cohorts.R:713:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L713) *style:* **Variable or function name should be lowerCamelCase.**
```r
  cohortData[ , B := ceiling(B / pixelGroupBiomassClass) * pixelGroupBiomassClass]
                ^
```
[R/cohorts.R:715:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L715) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  cohortData[ , totalBiomass := asInteger(totalBiomass)]
             ^
```
[R/cohorts.R:715:15:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L715) *style:* **Commas should never have a space before.**
```r
  cohortData[ , totalBiomass := asInteger(totalBiomass)]
             ~^
```
[R/cohorts.R:817:36:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L817) *style:* **Variable or function name should be lowerCamelCase.**
```r
  cohortData[cover > 0 & age == 0, B := 0L]
                                   ^
```
[R/cohorts.R:823:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L823) *style:* **Commented code should be removed.**
```r
  # cohortData[ , coverProp := (cover/100 * (NROW(cohortData) - 1) + 0.5) / NROW(cohortData)]
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:835:22:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L835) *style:* **Variable or function name should be lowerCamelCase.**
```r
subsetDT <- function(DT, by, doSubset = TRUE) {
                     ^~
```
[R/cohorts.R:840:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L840) *style:* **Lines should not be more than 100 characters.**
```r
              "using maximum of ", sam, " samples per combination of ecoregionGroup and speciesCode. ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/cohorts.R:845:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L845) *style:* **Variable or function name should be lowerCamelCase.**
```r
      DT <- DT[a$lineNum]
      ^~
```
[R/cohorts.R:988:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/cohorts.R#L988) *style:* **Lines should not be more than 100 characters.**
```r
    test2 <- sum(unique(pixelCohortData[, .(pixelGroup, noPixels)])$noPixels) != sum(!is.na(pixelGroupMap[]) & pixelGroupMap[] != 0)  ## 0's have no cohorts.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:37:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L37) *style:* **Commented code should be removed.**
```r
  #ecoregionMapInStudy <- raster::intersect(ecoregionMapFull, fixErrors(aggregate(studyArea)))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:54:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L54) *style:* **Variable or function name should be lowerCamelCase.**
```r
  NAs <- rtmNAs | rstEcoregionNAs
  ^~~
```
[R/ecoregionProducer.R:71:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L71) *style:* **Commented code should be removed.**
```r
  #ecoregionFactorValues <- na.omit(unique(rstEcoregion[]))
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:73:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L73) *style:* **Commented code should be removed.**
```r
  #ecoregionTable <- raster::levels(rstEcoregion)[[1]]
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:81:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L81) *style:* **Lines should not be more than 100 characters.**
```r
    # rstEcoregion[] <- plyr::mapvalues(rstEcoregion[], from = ecoregionTable$ecoregion, to = ecoregionTable$mapcode)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:81:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L81) *style:* **Commented code should be removed.**
```r
    # rstEcoregion[] <- plyr::mapvalues(rstEcoregion[], from = ecoregionTable$ecoregion, to = ecoregionTable$mapcode)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ecoregionProducer.R:96:37:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/ecoregionProducer.R#L96) *style:* **Commas should always have a space after.**
```r
  ecoregionTable <- ecoregionTable[,.(active = "yes", mapcode, ecoregion)]
                                    ^
```
[R/LANDIS-II-tables.R:76:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L76) *style:* **Lines should not be more than 100 characters.**
```r
    sppEquiv <- data.table(utils::data("sppEquivalencies_CA", package = "LandR", envir = environment()))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:84:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L84) *style:* **Lines should not be more than 100 characters.**
```r
  speciesTable <- speciesTable[species %in% equivalentName(sppNameVector, sppEquiv, "LANDIS_traits", multi = TRUE) &
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:101:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L101) *style:* **Lines should not be more than 100 characters.**
```r
#' (\url{https://raw.githubusercontent.com/dcyr/LANDIS-II_IA_generalUseFiles/master/speciesTraits.csv}).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:105:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L105) *style:* **Lines should not be more than 100 characters.**
```r
#' @param species a \code{data.table} that has species traits such as longevity, shade tolerance, etc.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:122:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L122) *style:* **Lines should not be more than 100 characters.**
```r
    sppEquiv <- data.table(utils::data("sppEquivalencies_CA", package = "LandR", envir = environment()))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:144:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L144) *style:* **Lines should not be more than 100 characters.**
```r
  speciesTableShort[species == "PSEU.MEN", longevity := 525] ## only in MC area, corresponding to var. glauca
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:153:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L153) *style:* **Lines should not be more than 100 characters.**
```r
  speciesTableShort <- speciesTableShort[species %in% equivalentName(sppNameVector, sppEquiv, "LANDIS_traits", multi = TRUE)]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:170:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L170) *style:* **Lines should not be more than 100 characters.**
```r
#' \url{https://github.com/LANDIS-II-Foundation/Extensions-Succession/master/biomass-succession-archive/trunk/tests/v6.0-2.0/biomass-succession_test.txt"}).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:190:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L190) *style:* **Commented code should be removed.**
```r
  maxcol <- 13 #max(count.fields(file.path(dPath, "species.txt"), sep = ""))
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:211:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L211) *style:* **Only use double-quotes.**
```r
  species[, ':='(seeddistance_eff = gsub(",", "", seeddistance_eff),
            ^~~~
```
[R/LANDIS-II-tables.R:211:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L211) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  species[, ':='(seeddistance_eff = gsub(",", "", seeddistance_eff),
                ^
```
[R/LANDIS-II-tables.R:224:18:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L224) *style:* **Only use double-quotes.**
```r
  speciesAddon[, ':='(leaflongevity = as.numeric(leaflongevity),
                 ^~~~
```
[R/LANDIS-II-tables.R:224:22:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L224) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  speciesAddon[, ':='(leaflongevity = as.numeric(leaflongevity),
                     ^
```
[R/LANDIS-II-tables.R:236:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L236) *style:* **Only use double-quotes.**
```r
  species[, ':='(species = paste0(toupper(substring(species1, 1, 1)),
            ^~~~
```
[R/LANDIS-II-tables.R:236:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L236) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  species[, ':='(species = paste0(toupper(substring(species1, 1, 1)),
                ^
```
[R/LANDIS-II-tables.R:240:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L240) *style:* **Only use double-quotes.**
```r
  species[, ':='(species1 = NULL, species2 = NULL)]
            ^~~~
```
[R/LANDIS-II-tables.R:240:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L240) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  species[, ':='(species1 = NULL, species2 = NULL)]
                ^
```
[R/LANDIS-II-tables.R:268:39:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L268) *style:* **Commas should always have a space after.**
```r
  mainInput <- mainInput[col1 != ">>",]
                                      ^
```
[R/LANDIS-II-tables.R:278:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L278) *style:* **Lines should not be more than 100 characters.**
```r
#' \url{https://github.com/LANDIS-II-Foundation/Extensions-Succession/master/biomass-succession-archive/trunk/tests/v6.0-2.0/ecoregion.txt"}).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:295:16:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L295) *style:* **Commented code should be removed.**
```r
  maxcol <- 5 #max(count.fields(file.path(dPath, "ecoregions.txt"), sep = ""))
               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:311:47:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L311) *style:* **Commas should always have a space after.**
```r
  ecoregion <- ecoregion[col1 != "LandisData",]
                                              ^
```
[R/LANDIS-II-tables.R:312:39:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L312) *style:* **Commas should always have a space after.**
```r
  ecoregion <- ecoregion[col1 != ">>",]
                                      ^
```
[R/LANDIS-II-tables.R:324:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L324) *style:* **Lines should not be more than 100 characters.**
```r
#' \url{https://github.com/LANDIS-II-Foundation/Extensions-Succession/master/biomass-succession-archive/trunk/tests/v6.0-2.0/biomass-succession-dynamic-inputs_test.txt"}).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/LANDIS-II-tables.R:356:61:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L356) *style:* **Commas should always have a space after.**
```r
  speciesEcoregion <- speciesEcoregion[col1 != "LandisData",]
                                                            ^
```
[R/LANDIS-II-tables.R:357:53:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L357) *style:* **Commas should always have a space after.**
```r
  speciesEcoregion <- speciesEcoregion[col1 != ">>",]
                                                    ^
```
[R/LANDIS-II-tables.R:368:22:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L368) *style:* **Only use double-quotes.**
```r
  speciesEcoregion[, ':='(species = paste0(toupper(substring(species1, 1, 1)),
                     ^~~~
```
[R/LANDIS-II-tables.R:368:26:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L368) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  speciesEcoregion[, ':='(species = paste0(toupper(substring(species1, 1, 1)),
                         ^
```
[R/LANDIS-II-tables.R:371:22:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L371) *style:* **Only use double-quotes.**
```r
  speciesEcoregion[, ':='(species1 = NULL, species2 = NULL)]
                     ^~~~
```
[R/LANDIS-II-tables.R:371:26:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/LANDIS-II-tables.R#L371) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  speciesEcoregion[, ':='(species1 = NULL, species2 = NULL)]
                         ^
```
[R/maps.R:22:29:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L22) *style:* **Variable or function name should be lowerCamelCase.**
```r
defineFlammable <- function(LandCoverClassifiedMap = NULL,
                            ^~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:129:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L129) *style:* **Variable or function name should be lowerCamelCase.**
```r
    MixedRas <- speciesStack[[1]]
    ^~~~~~~~
```
[R/maps.R:133:18:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L133) *style:* **Variable or function name should be lowerCamelCase.**
```r
    speciesStack$Mixed <- MixedRas
                 ^~~~~
```
[R/maps.R:177:25:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L177) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (isTRUE(unitTest)) { # slower -- older, but simpler Eliot June 5, 2019
                        ^
```
[R/maps.R:178:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L178) *style:* **Lines should not be more than 100 characters.**
```r
    # 1. Find length of each pixelGroup -- don't include pixelGroups in "by" that have only 1 cohort: N = 1
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:181:16:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L181) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
    pgd1 <- cd[ , list(N = .N), by = "pixelGroup"]
               ^
```
[R/maps.R:181:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L181) *style:* **Commas should never have a space before.**
```r
    pgd1 <- cd[ , list(N = .N), by = "pixelGroup"]
               ~^
```
[R/maps.R:187:61:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L187) *style:* **Put spaces around all infix operators.**
```r
    set(pgd1, NULL, "speciesProportion", pgd1$speciesGroupB /pgd1$totalB)
                                                            ^~
```
[R/maps.R:199:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L199) *style:* **Commented code should be removed.**
```r
  # setorderv(cohortdata, "pixelGroup")
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:200:32:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L200) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  pixelGroupData <- cohortdata[ , list(N = .N), by = "pixelGroup"]
                               ^
```
[R/maps.R:200:33:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L200) *style:* **Commas should never have a space before.**
```r
  pixelGroupData <- cohortdata[ , list(N = .N), by = "pixelGroup"]
                               ~^
```
[R/maps.R:202:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L202) *style:* **Variable or function name should be lowerCamelCase.**
```r
  N <- rep.int(pixelGroupData$N, pixelGroupData$N)
  ^
```
[R/maps.R:211:3:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L211) *style:* **Variable or function name should be lowerCamelCase.**
```r
  GT1 <- (b > 1)
  ^~~
```
[R/maps.R:214:86:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L214) *style:* **Put spaces around all infix operators.**
```r
    pixelGroupData[[1]] <- cohortdata[GT1, .(speciesProportion = sum(B, na.rm = TRUE)/totalB[1]),
                                                                                ~^~
```
[R/maps.R:218:73:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L218) *style:* **Put spaces around all infix operators.**
```r
    set(cohortdata, which(!GT1), "speciesProportion", cohortdata$B[!GT1]/cohortdata$totalB[!GT1])
                                                                       ~^~
```
[R/maps.R:219:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L219) *style:* **Lines should not be more than 100 characters.**
```r
    pixelGroupData[[NROW(pixelGroupData) + 1]] <- cohortdata[!GT1, c("pixelGroup", "speciesCode", "speciesProportion")]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:227:25:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L227) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (isTRUE(unitTest)) { # slower -- older, but simpler Eliot June 5, 2019
                        ^
```
[R/maps.R:249:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L249) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  if (FALSE) { # old algorithm
             ^
```
[R/maps.R:256:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L256) *style:* **Lines should not be more than 100 characters.**
```r
    set(pixelGroupData4, NULL, "speciesProportion", pixelGroupData4$speciesGroupB /pixelGroupData4$totalB)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:256:83:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L256) *style:* **Put spaces around all infix operators.**
```r
    set(pixelGroupData4, NULL, "speciesProportion", pixelGroupData4$speciesGroupB /pixelGroupData4$totalB)
                                                                                ^~
```
[R/maps.R:260:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L260) *style:* **Lines should not be more than 100 characters.**
```r
    all.equal(pixelGroupData4[, .(pixelGroup, speciesCode, totalB)], pixelGroupData[,.(pixelGroup, speciesCode, totalB)])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:260:86:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L260) *style:* **Commas should always have a space after.**
```r
    all.equal(pixelGroupData4[, .(pixelGroup, speciesCode, totalB)], pixelGroupData[,.(pixelGroup, speciesCode, totalB)])
                                                                                ^
```
[R/maps.R:265:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L265) *style:* **Lines should not be more than 100 characters.**
```r
  # 2. sort on pixelGroup and speciesProportion, reverse so that 1st row of each pixelGroup is the largest
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:280:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L280) *style:* **Commented code should be removed.**
```r
  # a2 <- Sys.time()
    ^~~~~~~~~~~~~~~~
```
[R/maps.R:284:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L284) *style:* **Commented code should be removed.**
```r
  # pixelGroupData2[mixed == TRUE, leading := "Mixed"]
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:285:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L285) *style:* **Commented code should be removed.**
```r
  # b2 <- Sys.time()
    ^~~~~~~~~~~~~~~~
```
[R/maps.R:439:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L439) *style:* **Lines should not be more than 100 characters.**
```r
  ## select which archives/targetFiles to extract -- because there was "multi" above, need unique here
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:446:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L446) *style:* **Lines should not be more than 100 characters.**
```r
                    archive2 = file.path(dPath, paste0("NFI_MODIS250m_kNN_Species_", kNNnames, "_v0.zip")))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:449:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L449) *style:* **Lines should not be more than 100 characters.**
```r
  if (!all(reproducible::basename2(file_path_sans_ext(names(archives))) == file_path_sans_ext(targetFiles)))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:456:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L456) *style:* **Lines should not be more than 100 characters.**
```r
    message("This looks like a lot of species; did you mean to pass only a subset of this to sppEquiv?",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:474:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L474) *style:* **Lines should not be more than 100 characters.**
```r
                         prepInputs, quick = TRUE) # don't need to digest all the "targetFile" and "archives"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:476:77:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L476) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  noDataLayers <- sapply(speciesLayers, function(x) if (maxValue(x) < thresh ) FALSE else TRUE)
                                                                            ^
```
[R/maps.R:479:76:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L479) *style:* **Commas should always have a space after.**
```r
    message("removing ", sum(!noDataLayers), " species because they had <",thresh,
                                                                           ^
```
[R/maps.R:481:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L481) *style:* **Lines should not be more than 100 characters.**
```r
            "\n  These species are retained (and could be further culled manually, if desired):\n  ",
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:503:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L503) *style:* **Commented code should be removed.**
```r
  # layerData <- Cache(sapply, X = speciesLayers, function(x) sum(x[] > 0, na.rm = TRUE))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:505:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L505) *style:* **Commented code should be removed.**
```r
  # ## remove layers that had < thresh pixels with biomass
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:506:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L506) *style:* **Commented code should be removed.**
```r
  # belowThresh <- layerData < thresh
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:508:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L508) *style:* **Commented code should be removed.**
```r
  #   message(names(belowThresh)[belowThresh], " was removed because it had no data")
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:509:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L509) *style:* **Commented code should be removed.**
```r
  #   speciesLayers[belowThresh] <- NULL
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/maps.R:608:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L608) *style:* **Variable or function name should be lowerCamelCase.**
```r
      LQRastName <- basename(tempfile(fileext = ".tif"))
      ^~~~~~~~~~
```
[R/maps.R:610:9:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L610) *style:* **Variable or function name should be lowerCamelCase.**
```r
        LQCurName <- basename(tempfile(fileext = ".tif"))
        ^~~~~~~~~
```
[R/maps.R:617:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L617) *style:* **Variable or function name should be lowerCamelCase.**
```r
      LQRastInHQcrs <- projectExtent(lowQualityStack, crs = crs(highQualityStack))
      ^~~~~~~~~~~~~
```
[R/maps.R:630:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L630) *style:* **Variable or function name should be lowerCamelCase.**
```r
      LQRast <- raster(LQRastName)
      ^~~~~~
```
[R/maps.R:648:9:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L648) *style:* **Variable or function name should be lowerCamelCase.**
```r
        HQRast <- raster(tmpHQName)
        ^~~~~~
```
[R/maps.R:653:9:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L653) *style:* **Variable or function name should be lowerCamelCase.**
```r
        HQRast <- highQualityStack[[SPP]]
        ^~~~~~
```
[R/maps.R:656:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L656) *style:* **Variable or function name should be lowerCamelCase.**
```r
      LQRast <- lowQualityStack[[SPP]]
      ^~~~~~
```
[R/maps.R:657:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L657) *style:* **Variable or function name should be lowerCamelCase.**
```r
      HQRast <- highQualityStack[[SPP]]
      ^~~~~~
```
[R/maps.R:664:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L664) *style:* **Variable or function name should be lowerCamelCase.**
```r
    NAs <- is.na(HQRast[])
    ^~~
```
[R/maps.R:668:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L668) *style:* **Variable or function name should be lowerCamelCase.**
```r
    HQRast <- writeRaster(HQRast, datatype = "INT1U",
    ^~~~~~
```
[R/maps.R:678:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L678) *style:* **Variable or function name should be lowerCamelCase.**
```r
      HQRast <- highQualityStack[[SPP]]
      ^~~~~~
```
[R/maps.R:682:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L682) *style:* **Variable or function name should be lowerCamelCase.**
```r
      LQRast <- lowQualityStack[[SPP]]
      ^~~~~~
```
[R/maps.R:686:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L686) *style:* **Variable or function name should be lowerCamelCase.**
```r
      HQRast <- highQualityStack[[SPP]]
      ^~~~~~
```
[R/maps.R:718:4:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/maps.R#L718) *style:* **Commented code should be removed.**
```r
  #names(sppMerges) <- equivalentName(names(sppMerges), sppEquiv,  column = sppEquivCol)
   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/misc.R:23:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/misc.R#L23) *style:* **Lines should not be more than 100 characters.**
```r
#' Essentially a wrapper around \code{round}, rather than \code{truncate}, which is what \code{as.integer}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/overlayLCCs.R:47:25:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L47) *style:* **Variable or function name should be lowerCamelCase.**
```r
overlayLCCs <- function(LCCs, forestedList, outputLayer,
                        ^~~~
```
[R/overlayLCCs.R:48:25:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L48) *style:* **Variable or function name should be lowerCamelCase.**
```r
                        NAcondition, NNcondition, remapTable = NULL,
                        ^~~~~~~~~~~
```
[R/overlayLCCs.R:48:38:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L48) *style:* **Variable or function name should be lowerCamelCase.**
```r
                        NAcondition, NNcondition, remapTable = NULL,
                                     ^~~~~~~~~~~
```
[R/overlayLCCs.R:49:43:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L49) *style:* **Variable or function name should be lowerCamelCase.**
```r
                        classesToReplace, availableERC_by_Sp,
                                          ^~~~~~~~~~~~~~~~~~
```
[R/overlayLCCs.R:65:5:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L65) *style:* **Variable or function name should be lowerCamelCase.**
```r
    LCCs <- stack(LCCs)
    ^~~~
```
[R/overlayLCCs.R:81:7:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L81) *style:* **Variable or function name should be lowerCamelCase.**
```r
      availableERC_by_Sp <- data.table(initialEcoregionCode = LCCs[[outputLayer]][])
      ^~~~~~~~~~~~~~~~~~
```
[R/overlayLCCs.R:90:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L90) *style:* **Variable or function name should be lowerCamelCase.**
```r
        dt[, NAs := eval(parse(text = NAcondition)), with = TRUE]
             ^~~
```
[R/overlayLCCs.R:92:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L92) *style:* **Variable or function name should be lowerCamelCase.**
```r
        dt[, NAs := NULL]
             ^~~
```
[R/overlayLCCs.R:96:14:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L96) *style:* **Variable or function name should be lowerCamelCase.**
```r
        dt[, NNcondition := eval(parse(text = NNcondition))]
             ^~~~~~~~~~~
```
[R/overlayLCCs.R:101:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L101) *style:* **Lines should not be more than 100 characters.**
```r
          ## It's possible that there are no pixels with classesToReplace that fulfill the NNcondition
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/overlayLCCs.R:105:1:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L105) *style:* **Lines should not be more than 100 characters.**
```r
                                  availableERC_by_Sp = na.omit(dt)[, c("initialEcoregionCode", "pixelIndex")])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/overlayLCCs.R:128:13:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L128) *style:* **Only use double-quotes.**
```r
      dt2[, ':='(initialEcoregionCode = newLCC, ecoregionCode = newLCC)]
            ^~~~
```
[R/overlayLCCs.R:128:17:](https://github.com/PredictiveEcology/LandR/blob/a496a78efac4c274e1f1f59bb728def4eb48c3bd/R/overlayLCCs.R#L128) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      dt2[, ':='(initialEcoregionCode = newLCC, ecoregionCode = newLCC)]
                ^
```


oh, yea, thanks, i wasnt sure about adding this here and then forgot that it ever was here. Will fix this in friday commit


how does it work now?


Successfully aliased the URL <https://zeit-optipng-server-01-p64fjrh66.now.sh> to the following aliases.

* https://image-server-one.now.sh
* https://zeit-optipng-server-01.c1i44.now.sh
* https://zeit-optipng-server-01-git-master.c1i44.now.sh


Note there is some scope issues. Ex:
Admin adds students
admin logs out
admin logs in
students don't display


This Is Super HARD I Need Sum Help


adicionado tema


Hello Dr Kabaso
I have to reiterate that we need to have a way to show that the project is being managed through this platform. Thus my request that for all the actions that are done they are to have a brief description that details the work done.  That will then form a record of the work and progress being done.
Also through this platform, we need to have a clear project brief with clearly defined targets and milestones. These milestones are what will become the evidence of work done in a virtual project.
Then we need to draw a list of target dates so not to do things in an ad hoc fashion. That will come from a project plan that you and I need to discuss, working backwards from the 28th June 2019 to the time and date you may be reading this.


@CypherNoodle ik


looks like the tag here wasn't bumped to v0.1.0


✅ Device tests passed on TvOS on [Azure DevOps](https://dev.azure.com/devdiv/DevDiv/_build/index?buildId=2784965)(TvOS): [Html Report](http://xamarin-storage/jenkins/xamarin-macios/master/57ea8dbb9147848b573113661494d34e6ab23c64/2784965/device-tests/jenkins-results/tests/index.html) ✅

# Test results

# All 113 tests passed


That looks like a good change!


✅ Device tests passed on TvOS on [Azure DevOps](https://dev.azure.com/devdiv/DevDiv/_build/index?buildId=2785114)(TvOS): [Html Report](http://xamarin-storage/jenkins/xamarin-macios/d16-2/34b324fac15873419bccaf01414dc77f0e1cff69/2785114/device-tests/jenkins-results/tests/index.html) ✅

# Test results

37 tests' device not found, 193 tests passed.


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* https://ae-icons-component.adaept.now.sh
* https://ae-icons-component-git-master.adaept.now.sh


shoot! thanks for catching that


Hi


New files


That’s exactly what I did to make the code work locally for me. I can look further into this tomorrow to make sure we’re not missing anything and suggest a fix


166817075_Issue7290 (Nigusse) - Win64-Windows-10-VisualStudio-16: OK (2436 of 2436 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


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* https://ae-icons-component-git-master.adaept.now.sh


添加功能：
数据完全一致弹出提示。


dasdadasdasds


asdasdw


delete package-lock


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* https://nextjs-buttercms.now.sh
* https://nextjs-buttercms.msweeneydev.now.sh
* https://nextjs-buttercms-git-master.msweeneydev.now.sh


👋 Noticed when looking through the changelog that this heading should be `v5.8.24`


without it the stacksafety test fails. I added them because I saw [these in LazyList doc](https://github.com/scala/scala/blob/v2.13.0/src/library/scala/collection/immutable/LazyList.scala#L196-L199)
I doubt this is the right way, but it's not obvious, if the doc is true, what would be.


Does this one belong in `HB_LEAN`? CONFIG.md says “`HB_LEAN`: Disables various non-shaping functionality in the library” but this option disables shaping functionality.


I haven't worked with LazyList much yet, but I think even the head is lazy, an here that won't be needed since we have to evaluate `fn(a)`.

Maybe:
```scala
val newFront = fn(a)
stack = newFront #::: tail
```


also to note that without the `force`, the lazyiness is different (less optimally lazy) according to the foldableAdditionalSuites


[Cnty Demographics.xlsx](https://github.com/ryanjameshenry/Muni_Race/files/3308602/Cnty.Demographics.xlsx)


Right. There are several such places a head is appended. I shall review them all.


Hola German,

Tu tp está incompleto y no parece que hayas entendido el patrón.
Por favor revisá lo que hicimos en clase
(https://github.com/obj2-unahur/maquina-gaseosas/tree/completo)
Para darte una idea. Volvé a leer el propósito del patrón, consultanos lo que no te quede claro y reformulá tu solución

Saludos