[R/create_test_simulation_output.R:4:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/create_test_simulation_output.R#L4) *style:* **Lines should not be more than 80 characters.**
```r
#' @param island_ontogeny Boolean indicating if an ontogeny or no ontogeny scenario
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_test_simulation_output.R:14:20:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/create_test_simulation_output.R#L14) *warning:* **no visible global function definition for ‘is_island_ontogeny_input’**
```r
    testit::assert(is_island_ontogeny_input(island_ontogeny))
                   ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:16:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_area_params.R#L16) *style:* **functions should have cyclomatic complexity of less than 15, this has 23.**
```r
are_area_params <- function(area_params) {
^
```
[R/DAISIE_area_params.R:34:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_area_params.R#L34) *style:* **Lines should not be more than 80 characters.**
```r
#' @param proportional_peak_t value from 0 to 1 indicating where in the island's history the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:39:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_area_params.R#L39) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list of numerical values containing area parameters for island ontogeny
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:6:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L6) *style:* **functions should have cyclomatic complexity of less than 15, this has 35.**
```r
are_rates <- function(x) {
^
```
[R/DAISIE_check_format.R:33:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
  if (island_ontogeny != "const" && island_ontogeny != "linear" && island_ontogeny != "beta") return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:46:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
  if (island_ontogeny != 0 && island_ontogeny != 1 && island_ontogeny != 2) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:68:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    if (!"island_age" %in% names(simulation_outputs[[n_replicate]][[1]])) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:70:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
        !"not_present_type1" %in% names(simulation_outputs[[n_replicate]][[1]]))) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:73:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    if (!"stt_all" %in% names(simulation_outputs[[n_replicate]][[1]])) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:75:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L75) *style:* **Commented code should be removed.**
```r
    # if (!"branching_times" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:76:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L76) *style:* **Commented code should be removed.**
```r
    # if (!"stac" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:77:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_check_format.R#L77) *style:* **Commented code should be removed.**
```r
    # if (!"missing_species" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:5:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L5) *style:* **Lines should not be more than 80 characters.**
```r
#' @param island_spec matrix with species on island (state of system at each time point)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:7:75:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#' @param keep_final_state logical indicating if final state of simulation
                                                                          ^
```
[R/DAISIE_create_island.R:10:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L10) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list with the island information, composed stt table, branching times of extant
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L12) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_create_island <- function(stt_table,
^~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:44:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
DAISIE_create_island <- function(stt_table,
                                           ^
```
[R/DAISIE_create_island.R:13:44:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L13) *style:* **Trailing whitespace is superfluous.**
```r
                                 totaltime,
                                           ^
```
[R/DAISIE_create_island.R:14:46:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L14) *style:* **Trailing whitespace is superfluous.**
```r
                                 island_spec,
                                             ^
```
[R/DAISIE_create_island.R:17:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L17) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:18:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L18) *style:* **Lines should not be more than 80 characters.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:18:104:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L18) *style:* **Trailing whitespace is superfluous.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
                                                                                ^
```
[R/DAISIE_create_island.R:19:27:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L19) *style:* **Commas should always have a space after.**
```r
  if (length(island_spec[,1]) == 0) {
                          ^
```
[R/DAISIE_create_island.R:20:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L20) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:21:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L21) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:41:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L41) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:43:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L43) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:45:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "branching time (BP)"] <- totaltime - as.numeric(island_spec[, "branching time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:46:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "Colonisation time (BP)"] <- totaltime - as.numeric(island_spec[, "Colonisation time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:47:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L47) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:54:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L54) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:56:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:56:65:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L56) *style:* **Only use double-quotes.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
                                                                ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:57:60:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L57) *style:* **Trailing whitespace is superfluous.**
```r
      number_colonists_present <- length(colonists_present)
                                                           ^
```
[R/DAISIE_create_island.R:58:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L58) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:59:35:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L59) *style:* **Trailing whitespace is superfluous.**
```r
      island_clades_info <- list()
                                  ^~
```
[R/DAISIE_create_island.R:61:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:61:58:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L61) *style:* **Only use double-quotes.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                         ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:61:104:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L61) *style:* **Commas should always have a space after.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:61:105:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L61) *style:* **Trailing whitespace is superfluous.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:62:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L62) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:63:37:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L63) *style:* **Only use double-quotes.**
```r
        if (class(subset_island) != 'matrix') {
                                    ^~~~~~~~
```
[R/DAISIE_create_island.R:67:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L67) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:69:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L69) *style:* **Lines should not be more than 80 characters.**
```r
                                                      island_spec = subset_island,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:71:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
                                                      keep_final_state = keep_final_state)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:77:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L77) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:80:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L80) *style:* **Lines should not be more than 80 characters.**
```r
                       taxon_list = island_clades_info, island_spec = island_spec)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:84:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_create_island.R#L84) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_data.R:2:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:7:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
#' #' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:12:34:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
#' the following elements.\cr \cr
                                 ^
```
[R/DAISIE_data.R:47:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:52:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:92:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L92) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in table
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:96:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A table containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:103:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic: for cases where both island and non-island populations of the species have been sampled) \cr
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:104:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic_MaxAge: for cases where island population of the species has not
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:124:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L124) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in RAW format simulated with the ML parameters of the CR model
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:125:27:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L125) *style:* **Trailing whitespace is superfluous.**
```r
#' for the Galapagos data.
                          ^
```
[R/DAISIE_data.R:127:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:158:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L158) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in DAISIE format simulated with the ML parameters of the CR
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:161:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L161) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:165:42:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
#' \code{$island_age} - the island age\cr
                                         ^
```
[R/DAISIE_data.R:197:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L197) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:247:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L247) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:256:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L256) *style:* **Lines should not be more than 80 characters.**
```r
#' The following elements of the list each contains information on a single colonist lineage
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:270:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L270) *style:* **Lines should not be more than 80 characters.**
```r
#' #' \code{$missing_species} - number of island species that were not sampled for
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:286:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L286) *style:* **Lines should not be more than 80 characters.**
```r
#' format, accepted by DAISIE_ML, DAISIE_SR_ML, DAISIE_loglik_all and DAISIE_SR_loglik_all
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:290:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L290) *style:* **Lines should not be more than 80 characters.**
```r
#' #' @description A list containing the colonization and branching times of the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:290:81:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L290) *style:* **Trailing whitespace is superfluous.**
```r
#' #' @description A list containing the colonization and branching times of the
                                                                                ^
```
[R/DAISIE_data.R:295:34:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L295) *style:* **Trailing whitespace is superfluous.**
```r
#' the following elements.\cr \cr
                                 ^
```
[R/DAISIE_data.R:321:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L321) *style:* **Lines should not be more than 80 characters.**
```r
#' @seealso \code{\link{DAISIE_dataprep}}, \code{\link{DAISIE_ML}}, \code{\link{DAISIE_SR_ML}}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:322:77:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_data.R#L322) *style:* **Trailing whitespace is superfluous.**
```r
#' @source Hauffe, T., D. Delicado, R.S. Etienne and L. Valente (submitted).
                                                                            ^
```
[R/DAISIE_dataprep.R:2:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L2) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:7:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:10:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L10) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:86:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L86) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^~
```
[R/DAISIE_dataprep.R:87:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L87) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:88:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L88) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:89:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L89) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:90:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
#' ### Create Galapagos data object where all taxa have the same macroevolutionary process
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:91:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L91) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:98:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L98) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:100:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L100) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:100:82:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L100) *style:* **Trailing whitespace is superfluous.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
                                                                                ^
```
[R/DAISIE_dataprep.R:101:79:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L101) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:104:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L104) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:113:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L113) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:114:80:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L114) *style:* **Trailing whitespace is superfluous.**
```r
#' ### Create Galapagos data object with a distinct macroevolutionary processes
                                                                               ^
```
[R/DAISIE_dataprep.R:115:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L115) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:116:79:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L116) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:117:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
#' # (Darwin's finches). Set fraction of potential colonists of type 2 to be 0.163.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:118:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L118) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:128:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L128) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **functions should have cyclomatic complexity of less than 15, this has 22.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Lines should not be more than 80 characters.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:17:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Use <-, not =, for assignment.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                ^
```
[R/DAISIE_dataprep.R:130:38:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                     ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:51:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                  ^
```
[R/DAISIE_dataprep.R:130:74:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                         ^
```
[R/DAISIE_dataprep.R:130:131:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                                ^
```
[R/DAISIE_dataprep.R:131:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L131) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/DAISIE_dataprep.R:132:24:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L132) *style:* **Use <-, not =, for assignment.**
```r
  number_colonisations = nrow(datatable)
                       ^
```
[R/DAISIE_dataprep.R:133:12:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L133) *style:* **Use <-, not =, for assignment.**
```r
  datalist = list()
           ^
```
[R/DAISIE_dataprep.R:134:13:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L134) *style:* **Variable and function name style should be snake_case.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
            ^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:134:28:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L134) *style:* **Put spaces around all infix operators.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
                          ~^~~
```
[R/DAISIE_dataprep.R:135:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L135) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_dataprep.R:136:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L136) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 1)
    ^
```
[R/DAISIE_dataprep.R:137:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L137) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:138:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:138:19:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                  ^
```
[R/DAISIE_dataprep.R:138:36:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                  ~^~
```
[R/DAISIE_dataprep.R:138:48:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Commas should always have a space after.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                               ^
```
[R/DAISIE_dataprep.R:138:59:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                         ~^~
```
[R/DAISIE_dataprep.R:138:60:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L138) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                           ^
```
[R/DAISIE_dataprep.R:140:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L140) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 2)
    ^
```
[R/DAISIE_dataprep.R:141:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L141) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:142:32:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L142) *style:* **Use <-, not =, for assignment.**
```r
    number_type2_colonisations = length(list_type2_clades)
                               ^
```
[R/DAISIE_dataprep.R:143:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:143:32:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L143) *style:* **Use <-, not =, for assignment.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
                               ^
```
[R/DAISIE_dataprep.R:145:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L145) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:146:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L146) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:146:25:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L146) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:146:41:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L146) *style:* **Put spaces around all infix operators.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:147:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L147) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:147:25:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L147) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:147:41:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L147) *style:* **Put spaces around all infix operators.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:149:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L149) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:149:25:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L149) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:150:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L150) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:150:25:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L150) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:152:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L152) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:152:19:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L152) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
                  ^
```
[R/DAISIE_dataprep.R:154:13:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L154) *warning:* **Avoid 1:nrow(...) expressions, use seq_len.**
```r
  for (i in 1:nrow(datatable))
            ^
```
[R/DAISIE_dataprep.R:155:3:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L155) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:156:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:156:23:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                      ^
```
[R/DAISIE_dataprep.R:156:71:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                      ^
```
[R/DAISIE_dataprep.R:156:86:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:107:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:117:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:147:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:157:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L157) *style:* **Lines should not be more than 80 characters.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:157:14:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L157) *style:* **Use <-, not =, for assignment.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
             ^
```
[R/DAISIE_dataprep.R:157:77:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                            ^
```
[R/DAISIE_dataprep.R:157:97:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                                ^
```
[R/DAISIE_dataprep.R:158:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L158) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:159:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Lines should not be more than 80 characters.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
      ^
```
[R/DAISIE_dataprep.R:159:21:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                   ~^~
```
[R/DAISIE_dataprep.R:159:32:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                               ^~
```
[R/DAISIE_dataprep.R:159:33:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                ^
```
[R/DAISIE_dataprep.R:159:46:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                             ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:70:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                     ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~
```
[R/DAISIE_dataprep.R:159:92:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:117:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:160:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:163:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ~^~
```
[R/DAISIE_dataprep.R:159:164:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~
```
[R/DAISIE_dataprep.R:159:168:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L159) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:160:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L160) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:161:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L161) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) == 1)
      ^
```
[R/DAISIE_dataprep.R:161:30:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L161) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) == 1)
                             ^
```
[R/DAISIE_dataprep.R:162:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L162) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:163:1:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L163) *style:* **Lines should not be more than 80 characters.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:163:41:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L163) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                        ^
```
[R/DAISIE_dataprep.R:163:56:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                       ^
```
[R/DAISIE_dataprep.R:163:69:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                                    ^
```
[R/DAISIE_dataprep.R:165:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L165) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) > 1)
      ^
```
[R/DAISIE_dataprep.R:165:29:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) > 1)
                            ^~
```
[R/DAISIE_dataprep.R:166:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L166) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:167:41:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L167) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                        ^
```
[R/DAISIE_dataprep.R:167:56:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L167) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                                       ^
```
[R/DAISIE_dataprep.R:169:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L169) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
      ^
```
[R/DAISIE_dataprep.R:169:20:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L169) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
                   ^
```
[R/DAISIE_dataprep.R:170:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L170) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:171:30:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L171) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 1
                             ^
```
[R/DAISIE_dataprep.R:173:7:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L173) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Endemic")
      ^
```
[R/DAISIE_dataprep.R:173:20:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L173) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Endemic")
                   ^
```
[R/DAISIE_dataprep.R:174:5:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L174) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:175:30:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L175) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 2
                             ^
```
[R/DAISIE_dataprep.R:176:9:](https://github.com/rsetienne/DAISIE/blob/c97847ba6a300dd60c5efac70337051b49827d20/R/DAISIE_dataprep.R#L176) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      if(max(the_brts)>island_age){
        ^
```


@data не стоит применять в классах-сервисах, ей самое место в классах-сущностях


오늘은 커밋 기본을 배우고 있어요


Successfully deployed to following URLs:

* https://tourvo-apollo-9zute7bus.now.sh
* https://tourvo-apollo-delta-sepia.now.sh
* https://tourvo-apollo.ppromerojr.now.sh
* https://tourvo-apollo-git-master.ppromerojr.now.sh


![](https://github.trello.services/images/mini-trello-icon.png) [create top view floor plan](https://trello.com/c/ayP0TZeN/6-create-top-view-floor-plan)


TeamCity MAS / MAS [Build 1.0.0.174-MAS-000-KeystonePost](https://teamcity.nice.org.uk/viewLog.html?buildId=61804&buildTypeId=Mas_Mas) outcome was **SUCCESS**
Summary: Running Build time: 00:02:11


哇，居然回复到这里来了 🤣


Frame pantalla 1


Jira Issue [TW-792]


Can you open an issue? There's something clearly wrong about:
```console
cray-cnl7-None
```
The `None` should expand to different targets.


Successfully deployed to following URLs:

* https://voina-ipqm2nukc.now.sh
* https://voina.jsmonday.dev
* https://voina.hackdoor.io
* https://voina.jsmonday.now.sh
* https://voina-git-master.jsmonday.now.sh


오늘 시작


zlsnb!


Have you added a specific filter for `aeonax.com` ? Given this was the only working fix for that website.


The auth.login() in gluon/tools.py evaluates next() before login
It may be easy to fix this, but it does need to be fixed.


opt-out #


Добавил в блок)


delete all #13


169840232_Issue7547 (mjwitte) - x86_64-Linux-Ubuntu-18.04-cppcheck: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


test


I think this rotation is incorrect. You might also need a translation. This rotates the cell image center around the origin of the cell image, and on line 229 the spot center is rotated around the origin of the cell image. Not sure what you actually want to rotate around, I will try to draw it.


169840232_Issue7547 (mjwitte) - x86_64-Linux-Ubuntu-18.04-custom_check: OK (11 of 11 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


opt-out #60 delete


Successfully deployed to following URLs:

* https://flamme-rouge-tour-ljgso77g6.now.sh
* https://tour.jonathanbyrne.net
* https://flamme-rouge-tour.jpbyrne.now.sh
* https://flamme-rouge-tour-git-master.jpbyrne.now.sh


Поменял на comment-list__item-image. Думаю эти картинки явно имеют важность и будут прописаны в HTML, значит, если я верно понимаю их разумно сделать элементами?


Hello World!


Close #387


Прилепил к блоку


#57 opt-out


Yeah @wluyima makes sense... there was another class that was public so I made it public to be consistent or just in case I was missing something, but will switch to protected


Successfully deployed to following URLs:

* https://front-end-4nbtbvh30.now.sh
* https://use-my-tools.now.sh
* https://front-end.use-my-tools.now.sh
* https://front-end-git-master.use-my-tools.now.sh


I guess we need a fully customized version anyway - do you want me to have a look at that?


Remove line


Elimine esta linea para efecto de las pruebas de Git con la clase de POO


Successfully deployed to following URLs:

* https://front-end-g7j3lzf6r.now.sh
* https://front-end-beta-mauve.now.sh
* https://front-end.posthere.now.sh
* https://front-end-git-master.posthere.now.sh


Cool!


Put it up for review, I'll take a look


I am puzzled as to how this logic ever worked since fetch_from_s3 is designed to return None in the event of a failure to fetch the file, rather than raise an exception.


السلام عليكم hi can you tell me how to  do this in discord my name in dis IS-TL#9759 plz ( :


@JuliaRegistrator register


Registration pull request updated: [JuliaRegistries/General/5491](https://github.com/JuliaRegistries/General/pull/5491)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.1.0 -m "<description of version>" fb25c1f512433522ff3f4034a61052c80f562d3a
git push origin v0.1.0
```


I can add it but I won't have time to check if this work. I will assume it does since it will accomplish the same thing as the one I removed.


Не пойму, что не верно(  элемент это __item


Nice, thanks!


Если сделать стрелочной функцией, то можно без ретурн
`
const Button = (props) => ({
    <button type="button" className="button-add">
        {props.button}
    </button>
})
`


[R/download_classes.R:32:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/download_classes.R#L32) *style:* **functions should have cyclomatic complexity of less than 15, this has 27.**
```r
.check_marray_dl_config <- function(
^
```
[R/list_manipulation.R:24:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/list_manipulation.R#L24) *style:* **functions should have cyclomatic complexity of less than 15, this has 18.**
```r
get_or_else <- function(
^
```
[R/microarray_classes.R:228:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L228) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnBuilder_keepSample <- function(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:265:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L265) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnDefault_keepSample <- gld_fnBuilder_keepSample(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:287:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L287) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnDefault_keepProbe <- function(
^~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:326:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L326) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnBuilder_exptDesign <- function(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:327:38:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L327) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
                                     treatment.cols = NULL,
                                     ^~~~~~~~~~~~~~
```
[R/microarray_classes.R:328:38:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L328) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
                                     design.fn = NULL) {
                                     ^~~~~~~~~
```
[R/microarray_classes.R:389:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L389) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnDefault_exptDesign <- gld_fnBuilder_exptDesign(
^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:413:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L413) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnDefault_esetAnnotation <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_classes.R:462:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_classes.R#L462) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
gld_fnDefault_transformAndProbeFilter <- function(
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/microarray_functions.R:323:37:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_functions.R#L323) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
                                    entrezgene.db) {
                                    ^~~~~~~~~~~~~
```
[R/microarray_functions.R:437:30:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/R/microarray_functions.R#L437) *style:* **Variable and function name style should be snake_case or CamelCase.**
```r
    Biobase::featureData(es)$entrez.id <- es_entrez_id
                             ^~~~~~~~~
```
[tests/testthat/test-import_functions.R:151:1:](https://github.com/russHyde/miiq/blob/1b5a16292e2c3e78ffed1e8df304052af53a5aec/tests/testthat/test-import_functions.R#L151) *style:* **Lines should not be more than 80 characters.**
```r
  # - intersect(c("10", "1", "987654"), c(1, 10, 100, 987654)) == c(10, 1, 987654)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```


Successfully deployed to following URLs:

* https://casamia-3ipnzydh8.now.sh
* https://casamia.chensiyu.now.sh
* https://casamia-git-master.chensiyu.now.sh


@dbo-odoo
Thank you for the pointer @dbo-odoo. I guess this will be reached within one month ¯\_(ツ)_/¯


ok


I like this change.  But I wonder if we need the variable at all. For me I would just make it so that if the user pushed `point` to `(point-max)` then scrolling is automatic.  Otherwise, stay put.


Принято!


### TinyCI build failure:
[make -j 3] returned [2]:
```[  1%] Built target json11
[  7%] Built target lua
[  7%] Built target miniz
[ 16%] Built target box2d
[ 43%] Built target sp2freetype
[ 73%] Built target bullet
Scanning dependencies of target ZeroRho
[ 73%] Building CXX object CMakeFiles/ZeroRho.dir/src/main.cpp.o
[ 73%] Building CXX object CMakeFiles/ZeroRho.dir/src/camera.cpp.o
[ 73%] Building CXX object CMakeFiles/ZeroRho.dir/src/player.cpp.o
[ 73%] Building CXX object CMakeFiles/ZeroRho.dir/src/script.cpp.o
CMakeFiles/ZeroRho.dir/build.make:110: recipe for target 'CMakeFiles/ZeroRho.dir/src/player.cpp.o' failed
CMakeFiles/Makefile2:294: recipe for target 'CMakeFiles/ZeroRho.dir/all' failed
Makefile:105: recipe for target 'all' failed

/data/tinyci_build/daid/ZeroRho/src/player.cpp: In member function 'void PlayerShip::explosion()':
/data/tinyci_build/daid/ZeroRho/src/player.cpp:130:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'acceleration'
         p.acceleration = -p.velocity * 0.3f;
           ^~~~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:131:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'start_size'
         p.start_size = 0.5;
           ^~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:132:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'end_size'; did you mean 'size'?
         p.end_size = 10.0;
           ^~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:133:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'start_color'
         p.start_color = sp::Color(1,1,1);
           ^~~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:134:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'end_color'; did you mean 'color'?
         p.end_color = sp::Color(1,1,1,0);
           ^~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:149:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'acceleration'
         p.acceleration = sp::Vector3f(0, 0, 0);
           ^~~~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:150:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'start_size'
         p.start_size = 1.5;
           ^~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:151:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'end_size'; did you mean 'size'?
         p.end_size = 2.5;
           ^~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:152:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'start_color'
         p.start_color = sp::Color(1,1,1);
           ^~~~~~~~~~~
/data/tinyci_build/daid/ZeroRho/src/player.cpp:153:11: error: 'class sp::ParticleEmitter::Parameters' has no member named 'end_color'; did you mean 'color'?
         p.end_color = sp::Color(1,0,0,0);
           ^~~~~~~~~
make[2]: *** [CMakeFiles/ZeroRho.dir/src/player.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [CMakeFiles/ZeroRho.dir/all] Error 2
make: *** [all] Error 2
```


I tried creating a struct in hpp file "Alphabet" which contains the string of the alphabet and the size of the alphabet, just to see if a struct contained in a class would work, however the compiler doesn't seem to like that. Also having some problems with the map; I have tried both "typedef" and "using", to create the type for the map, neither of which the compiler seems to like.


There is no urgent priority for this, but it will almost certainly need doing at some point


Remove empty line


- Twitter embeds now show multiple images:

![image](https://user-images.githubusercontent.com/18150845/69151403-de7b6b00-0ada-11ea-8b9a-fc3fbd42193f.png)
- A bunch of new audit log actons have been added:

![image](https://user-images.githubusercontent.com/18150845/69152466-d15f7b80-0adc-11ea-96bd-c5049278bbe8.png)

---

- New action types: `PRIVATE_CHANNEL_RECIPIENTS_INVITE_OPEN`, `PRIVATE_CHANNEL_RECIPIENTS_INVITE_CLOSE`
- New analytics location: `Voice Panel`
- New audit logs actions:
  - `MEMBER_MOVE: 26`
  - `MEMBER_DISCONNECT: 27`
  - `BOT_ADD: 28`
  - `MESSAGE_BULK_DELETE: 73`
  - `MESSAGE_PIN: 74`
  - `MESSAGE_UNPIN: 75`
  - `INTEGRATION_CREATE: 80`
  - `INTEGRATION_UPDATE: 81`
  - `INTEGRATION_DELETE: 8`
- New audit log target type: `INTEGRATION`
- New audit log change keys:
  - `ENABLE_EMOTICONS: "enable_emoticons"`
  - `EXPIRE_BEHAVIOR: "expire_behavior"`
  - `EXPIRE_GRACE_PERIOD: "expire_grace_period`

## Strings
#### Added
- `SYSTEM_DM_CHANNEL_DESCRIPTION: "This message thread is reserved for official Discord notifications."`
- `SYSTEM_DM_CHANNEL_DESCRIPTION_SUBTEXT: "Discord will never ask you for your password or account token"`
- `SYSTEM_DM_HELP_CENTER: "Help Center"`
- `SYSTEM_DM_EMPTY_MESSAGE: "This is an official message from Team Discord. Please be advised that Discord will never ask you for your password or account token."`
- `SYSTEM_DM_TAG_ADMIN: "ADMIN"`
- `SYSTEM_DM_ACTIVITY_TEXT: "Official Discord Message"`
- `ACTIVITY_PANEL_GO_LIVE_STREAM_GAME: "Stream !!{game}!!"`
- `ACTIVITY_PANEL_GO_LIVE_ALREADY_LIVE: "You're already Live!"`
- `GUILD_SETTINGS_AUDIT_LOG_MEMBER_MOVE: "$[**!!{user}!!**](userHook) moved {count, plural, =1 {**a user**} other {**!!{count}!! users**}} to $[**!!{channel}!!**](channelHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_MEMBER_DISCONNECT: "$[**!!{user}!!**](userHook) disconnected {count, plural, =1 {**a user**} other {**!!{count}!! users**}} from voice"`
- `GUILD_SETTINGS_AUDIT_LOG_BOT_ADD: "$[**!!{user}!!**](userHook) added $[**!!{target}!!**](targetHook) to the server"`
- `GUILD_SETTINGS_AUDIT_LOG_MESSAGE_BULK_DELETE: "$[**!!{user}!!**](userHook) deleted {count, plural, =1 {**a message**} other {**!!{count}!! messages**}} in $[**!!{target}!!**](targetHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_MESSAGE_PIN: "$[**!!{user}!!**](userHook) pinned a message by $[**!!{target}!!**](targetHook) in $[**!!{channel}!!**](channelHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_MESSAGE_UNPIN: "$[**!!{user}!!**](userHook) unpinned a message by $[**!!{target}!!**](targetHook) in $[**!!{channel}!!**](channelHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_CREATE: "$[**!!{user}!!**](userHook) added an integration for $[**!!{target}!!**](targetHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_UPDATE: "$[**!!{user}!!**](userHook) updated the integration for $[**!!{target}!!**](targetHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_DELETE: "$[**!!{user}!!**](userHook) deleted the integration for $[**!!{target}!!**](targetHook)"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_ENABLE_EMOTICONS_ON: "Enabled emoticons"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_ENABLE_EMOTICONS_OFF: "Disabled custom emoticons"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_EXPIRE_BEHAVIOR_REMOVE_SYNCED_ROLE: "Set the expired sub behavior to **Remove Role**"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_EXPIRE_BEHAVIOR_KICK_FROM_SERVER: "Set the expired sub behavior to **Kick**"`
- `GUILD_SETTINGS_AUDIT_LOG_INTEGRATION_EXPIRE_GRACE_PERIOD: "Set the expire grace period to **{newValue, plural, =1 {a day} other {# days}}**"`
- `GUILD_SETTINGS_ACTION_FILTER_MEMBER_MOVE: "Move Member"`
- `GUILD_SETTINGS_ACTION_FILTER_MEMBER_DISCONNECT: "Disconnect Member"`
- `GUILD_SETTINGS_ACTION_FILTER_BOT_ADD: "Add Bot"`
- `GUILD_SETTINGS_ACTION_FILTER_MESSAGE_BULK_DELETE: "Bulk Delete Messages"`
- `GUILD_SETTINGS_ACTION_FILTER_MESSAGE_PIN: "Pin Message"`
- `GUILD_SETTINGS_ACTION_FILTER_MESSAGE_UNPIN: "Unpin Message"`
- `GUILD_SETTINGS_ACTION_FILTER_INTEGRATION_CREATE: "Create Integration"`
- `GUILD_SETTINGS_ACTION_FILTER_INTEGRATION_UPDATE: "Update Integration"`
- `GUILD_SETTINGS_ACTION_FILTER_INTEGRATION_DELETE: "Delete Integration"`
- `UPLOAD_DEBUG_LOG_FAILURE_PROGRESS: "Hold up! Your logs have been uploaded and are still being processed."`
- `UPLOAD_DEBUG_LOG_FAILURE_NO_FILE: "We did not find any debug logs to upload. Please make sure that debug logging is enabled and try again."`
- `UPLOAD_DEBUG_LOG_FAILURE_UPLOAD: "Something went wrong while uploading debug files. Please try again."`
- `UPLOAD_DEBUG_LOG_FAILURE_READ: "Something went wrong while reading log files from your system. Please try again."`
- `UPLOAD_DEBUG_LOG_FAILURE: "Something went wrong and we were unable to upload your debug files. Please try again."`
#### Removed
- `UPLOAD_DEBUG_LOG_PROGRESS_HEADER: "Upload in Progress"`
- `UPLOAD_DEBUG_LOG_PROGRESS: "Hold up! Your logs have been uploaded and are still being processed."`
- `UPLOAD_DEBUG_LOG_FAILURE_HEADER: "Upload Failed"`
- `UPLOAD_DEBUG_LOG_FAILURE: "Something went wrong and we were unable to upload your debug files. Please try uploading again."`


- Endpoint removed: `MESSAGE_SUPPRESS_EMBEDS: "/channels/:channel/messages/:message/suppress-embeds"`
(moved to `PATCH MESSAGE`: `{ suppress: 1, flags: 4 }`

## New string
- `GUILD_MESSAGE_NOTIFICATIONS_ONLY_MENTIONS: "Only @mentions"`


- Experiments removed: `TABS_IOS: "2019-05_tabs_ios"`, `TABS_IOS_EXISTING: "2019-07_tabs_ios_existing"`


On its way to Maven Central :)


Successfully deployed to following URLs:

* https://kauri-serverless-migration-9hls2441m.now.sh
* https://kauri-serverless-migration-omega-ten.now.sh
* https://dev.kauri.io
* https://kauri-serverless-migration.kauri.now.sh
* https://kauri-serverless-migration-git-master.kauri.now.sh


TeamCity MAS / MAS [Build 1.0.0.175-MAS-000-KeystonePost](https://teamcity.nice.org.uk/viewLog.html?buildId=61805&buildTypeId=Mas_Mas) outcome was **SUCCESS**
Summary: Running Build time: 00:02:16


To be more simple i made ID of Group of int, so i can initialize it using loop index.


Successfully deployed to following URLs:

* https://java-programming-fall-19-7fhqqp6mf.now.sh
* https://programming-f19.mooc.fi
* https://java-programming-fall-19.mooc.now.sh
* https://java-programming-fall-19-git-master.mooc.now.sh


This was made using feedback from issue aspnet/AspNetCore#5528


Successfully deployed to following URLs:

* https://rom-18-dashboard-p8mrygf75.now.sh
* https://rom-18.now.sh
* https://rom-18-dashboard.asleberge.now.sh
* https://rom-18-dashboard-git-master.asleberge.now.sh


@uBlock-user I see no anti adb message even without that filter


Nope, I don't use it. I just started to look into this library to use it for a Windows based non-browser client. I tried to build `master` and it failed. To be honest I don't know if I even need `sk-libfido2`. Most likely not.


all delete about our family cookie


Successfully deployed to following URLs:

* https://blog-ke3tmvsb5.now.sh
* https://blog-ruby-rho.now.sh
* https://blog.mingjie.info
* https://blog.itsmingjie.now.sh
* https://blog-git-master.itsmingjie.now.sh


Can you make a pull request of this change or should I just cherry-pick it?


This function is already defined in `cmake/Modules/CUnit/src/main.c.in`. Should this function not be in some kind of library which can be used by several components?


Successfully deployed to following URLs:

* https://nohai-app-exxfqtq94.now.sh
* https://nohai-app.now.sh
* https://nohai-app.nohai-team.now.sh
* https://nohai-app-git-master.nohai-team.now.sh


opt-out and delete our family


Oh, ok. sk-libfido2 is most likely not needed in your case. The Windows build has been repaired in 34d557c2bb. Thanks!


I have nothing else with any priority at the moment, so can as well look at that - better than boredom.


Successfully deployed to following URLs:

* https://docs-is7qg451a.now.sh
* https://docs.connctd.io
* https://docs.connctd.now.sh
* https://docs-git-master.connctd.now.sh


Successfully deployed to following URLs:

* https://heron-81d30j1pf.now.sh
* https://heron-three-topaz.now.sh
* https://heronstory.now.sh
* https://heron.heyrishi.now.sh
* https://heron-git-master.heyrishi.now.sh


Successfully deployed to following URLs:

* https://relay-example-oqo7ow5kj.now.sh
* https://relay-example.adeira.now.sh
* https://relay-example-git-master.adeira.now.sh


lyra2z330 will only work on one GPU in this miner I would leave it disabled; klaust-mod-r9 has Lyra2z330 working on multiple GPUs


True. I'll remove this and use the pwr guid prefix directly.


删除


Successfully deployed to following URLs:

* https://rom-18-dashboard-ifsgw1e2i.now.sh
* https://rom-18.now.sh
* https://rom-18-dashboard.asleberge.now.sh
* https://rom-18-dashboard-git-master.asleberge.now.sh


README.md


Successfully deployed to following URLs:

* https://portfolio-n1j21edyr.now.sh
* https://9andresc.codes
* https://9andresc.now.sh
* https://portfolio.gustavocabral.now.sh
* https://portfolio-git-master.gustavocabral.now.sh


This is excellent. Unpaywall made 500,000 requests to us in one month it seems... definitely don't want to count those as valid user impressions.


# About Me
*This is a short description about my life*

My name is Toska and I enjoy learning about new technology. I also like running races and travling to places with beautiful rivers and oceans. I am a nature person and I enjoy every bit of my adventures. I have been working at UNC Injury Prevention Research Center for 2 years. I am orignially from Massachusettus but have lived in North Carolina for over 15 years.


luhao


Is it necessary to add an ampersand?


google-opt-out


@JuliaRegistrator register


Successfully deployed to following URLs:

* https://backyourstack-prgfnybkxv.now.sh
* https://backyourstack.now.sh
* https://backyourstack.com
* https://www.backyourstack.com


not necessary


Registration pull request created: [JuliaRegistries/General/5583](https://github.com/JuliaRegistries/General/pull/5583)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v4.0.1 -m "<description of version>" 4dd77e5df9f47ce125d8db7e9ee9ce5c8e1315ff
git push origin v4.0.1
```


السلام عليكم hi can you tell me how to do this in discord my name in dis IS-TL#9759 plz ( :