[R/create_test_simulation_output.R:4:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/create_test_simulation_output.R#L4) *style:* **Lines should not be more than 80 characters.**
```r
#' @param island_ontogeny Boolean indicating if an ontogeny or no ontogeny scenario
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/create_test_simulation_output.R:14:20:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/create_test_simulation_output.R#L14) *warning:* **no visible global function definition for ‘is_island_ontogeny_input’**
```r
    testit::assert(is_island_ontogeny_input(island_ontogeny))
                   ^~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:16:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_area_params.R#L16) *style:* **functions should have cyclomatic complexity of less than 15, this has 23.**
```r
are_area_params <- function(area_params) {
^
```
[R/DAISIE_area_params.R:34:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_area_params.R#L34) *style:* **Lines should not be more than 80 characters.**
```r
#' @param proportional_peak_t value from 0 to 1 indicating where in the island's history the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_area_params.R:39:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_area_params.R#L39) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list of numerical values containing area parameters for island ontogeny
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:6:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L6) *style:* **functions should have cyclomatic complexity of less than 15, this has 35.**
```r
are_rates <- function(x) {
^
```
[R/DAISIE_check_format.R:33:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L33) *style:* **Lines should not be more than 80 characters.**
```r
  if (island_ontogeny != "const" && island_ontogeny != "linear" && island_ontogeny != "beta") return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:46:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
  if (island_ontogeny != 0 && island_ontogeny != 1 && island_ontogeny != 2) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:68:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L68) *style:* **Lines should not be more than 80 characters.**
```r
    if (!"island_age" %in% names(simulation_outputs[[n_replicate]][[1]])) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:70:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L70) *style:* **Lines should not be more than 80 characters.**
```r
        !"not_present_type1" %in% names(simulation_outputs[[n_replicate]][[1]]))) {
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:73:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L73) *style:* **Lines should not be more than 80 characters.**
```r
    if (!"stt_all" %in% names(simulation_outputs[[n_replicate]][[1]])) return(FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:75:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L75) *style:* **Commented code should be removed.**
```r
    # if (!"branching_times" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:76:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L76) *style:* **Commented code should be removed.**
```r
    # if (!"stac" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_check_format.R:77:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_check_format.R#L77) *style:* **Commented code should be removed.**
```r
    # if (!"missing_species" %in% names(simulation_outputs)) return(FALSE)
      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:5:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L5) *style:* **Lines should not be more than 80 characters.**
```r
#' @param island_spec matrix with species on island (state of system at each time point)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:7:75:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#' @param keep_final_state logical indicating if final state of simulation
                                                                          ^
```
[R/DAISIE_create_island.R:10:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L10) *style:* **Lines should not be more than 80 characters.**
```r
#' @return list with the island information, composed stt table, branching times of extant
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L12) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_create_island <- function(stt_table,
^~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:12:44:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
DAISIE_create_island <- function(stt_table,
                                           ^
```
[R/DAISIE_create_island.R:13:44:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L13) *style:* **Trailing whitespace is superfluous.**
```r
                                 totaltime,
                                           ^
```
[R/DAISIE_create_island.R:14:46:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L14) *style:* **Trailing whitespace is superfluous.**
```r
                                 island_spec,
                                             ^
```
[R/DAISIE_create_island.R:17:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L17) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:18:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L18) *style:* **Lines should not be more than 80 characters.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:18:104:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L18) *style:* **Trailing whitespace is superfluous.**
```r
  ### if there are no species on the island branching_times = island_age, stac = 0, missing_species = 0
                                                                                ^
```
[R/DAISIE_create_island.R:19:27:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L19) *style:* **Commas should always have a space after.**
```r
  if (length(island_spec[,1]) == 0) {
                          ^
```
[R/DAISIE_create_island.R:20:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L20) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_create_island.R:21:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L21) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:41:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L41) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:43:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L43) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:45:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "branching time (BP)"] <- totaltime - as.numeric(island_spec[, "branching time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:46:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
    island_spec[, "Colonisation time (BP)"] <- totaltime - as.numeric(island_spec[, "Colonisation time (BP)"])
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:47:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L47) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_create_island.R:54:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L54) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:56:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L56) *style:* **Lines should not be more than 80 characters.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:56:65:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L56) *style:* **Only use double-quotes.**
```r
      colonists_present <- sort(as.numeric(unique(island_spec[, 'Mainland Ancestor'])))
                                                                ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:57:60:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L57) *style:* **Trailing whitespace is superfluous.**
```r
      number_colonists_present <- length(colonists_present)
                                                           ^
```
[R/DAISIE_create_island.R:58:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L58) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/DAISIE_create_island.R:59:35:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L59) *style:* **Trailing whitespace is superfluous.**
```r
      island_clades_info <- list()
                                  ^~
```
[R/DAISIE_create_island.R:61:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L61) *style:* **Lines should not be more than 80 characters.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:61:58:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L61) *style:* **Only use double-quotes.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                         ^~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:61:104:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L61) *style:* **Commas should always have a space after.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:61:105:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L61) *style:* **Trailing whitespace is superfluous.**
```r
        subset_island <- island_spec[which(island_spec[, 'Mainland Ancestor'] == colonists_present[i]),]
                                                                                ^
```
[R/DAISIE_create_island.R:62:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L62) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:63:37:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L63) *style:* **Only use double-quotes.**
```r
        if (class(subset_island) != 'matrix') {
                                    ^~~~~~~~
```
[R/DAISIE_create_island.R:67:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L67) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:69:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L69) *style:* **Lines should not be more than 80 characters.**
```r
                                                      island_spec = subset_island,
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:71:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L71) *style:* **Lines should not be more than 80 characters.**
```r
                                                      keep_final_state = keep_final_state)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:77:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L77) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/DAISIE_create_island.R:80:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L80) *style:* **Lines should not be more than 80 characters.**
```r
                       taxon_list = island_clades_info, island_spec = island_spec)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_create_island.R:84:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_create_island.R#L84) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_data.R:2:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L2) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:7:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L7) *style:* **Lines should not be more than 80 characters.**
```r
#' #' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:12:34:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L12) *style:* **Trailing whitespace is superfluous.**
```r
#' the following elements.\cr \cr
                                 ^
```
[R/DAISIE_data.R:47:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in list
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:52:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L52) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:92:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L92) *style:* **Lines should not be more than 80 characters.**
```r
#' @title Colonization and branching times of 8 terrestrial avifaunal clades in table
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:96:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L96) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A table containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:103:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L103) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic: for cases where both island and non-island populations of the species have been sampled) \cr
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:104:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L104) *style:* **Lines should not be more than 80 characters.**
```r
#' * Non_endemic_MaxAge: for cases where island population of the species has not
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:124:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L124) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in RAW format simulated with the ML parameters of the CR model
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:125:27:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L125) *style:* **Trailing whitespace is superfluous.**
```r
#' for the Galapagos data.
                          ^
```
[R/DAISIE_data.R:127:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L127) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:158:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L158) *style:* **Lines should not be more than 80 characters.**
```r
#' @title 1000 islands in DAISIE format simulated with the ML parameters of the CR
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:161:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L161) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:165:42:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
#' \code{$island_age} - the island age\cr
                                         ^
```
[R/DAISIE_data.R:197:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L197) *style:* **Lines should not be more than 80 characters.**
```r
#' @description Each simulated dataset is an element of the list, which can be called using
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:247:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L247) *style:* **Lines should not be more than 80 characters.**
```r
#' @description A list containing the colonization and branching times of the terrestrial
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:256:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L256) *style:* **Lines should not be more than 80 characters.**
```r
#' The following elements of the list each contains information on a single colonist lineage
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:270:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L270) *style:* **Lines should not be more than 80 characters.**
```r
#' #' \code{$missing_species} - number of island species that were not sampled for
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:286:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L286) *style:* **Lines should not be more than 80 characters.**
```r
#' format, accepted by DAISIE_ML, DAISIE_SR_ML, DAISIE_loglik_all and DAISIE_SR_loglik_all
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:290:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L290) *style:* **Lines should not be more than 80 characters.**
```r
#' #' @description A list containing the colonization and branching times of the
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:290:81:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L290) *style:* **Trailing whitespace is superfluous.**
```r
#' #' @description A list containing the colonization and branching times of the
                                                                                ^
```
[R/DAISIE_data.R:295:34:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L295) *style:* **Trailing whitespace is superfluous.**
```r
#' the following elements.\cr \cr
                                 ^
```
[R/DAISIE_data.R:321:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L321) *style:* **Lines should not be more than 80 characters.**
```r
#' @seealso \code{\link{DAISIE_dataprep}}, \code{\link{DAISIE_ML}}, \code{\link{DAISIE_SR_ML}}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_data.R:322:77:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_data.R#L322) *style:* **Trailing whitespace is superfluous.**
```r
#' @source Hauffe, T., D. Delicado, R.S. Etienne and L. Valente (submitted).
                                                                            ^
```
[R/DAISIE_dataprep.R:2:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L2) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:7:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L7) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:10:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L10) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:86:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L86) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^~
```
[R/DAISIE_dataprep.R:87:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L87) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:88:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L88) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:89:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L89) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:90:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L90) *style:* **Lines should not be more than 80 characters.**
```r
#' ### Create Galapagos data object where all taxa have the same macroevolutionary process
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:91:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L91) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:98:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L98) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:100:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L100) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:100:82:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L100) *style:* **Trailing whitespace is superfluous.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
                                                                                ^
```
[R/DAISIE_dataprep.R:101:79:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L101) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:104:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L104) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:113:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L113) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:114:80:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L114) *style:* **Trailing whitespace is superfluous.**
```r
#' ### Create Galapagos data object with a distinct macroevolutionary processes
                                                                               ^
```
[R/DAISIE_dataprep.R:115:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L115) *style:* **Lines should not be more than 80 characters.**
```r
#' # for the Darwin's finches. One process applies to type 1 species (all species
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:116:79:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L116) *style:* **Trailing whitespace is superfluous.**
```r
#' # except for Darwin's finches) and the other applies only to type 2 species
                                                                              ^
```
[R/DAISIE_dataprep.R:117:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L117) *style:* **Lines should not be more than 80 characters.**
```r
#' # (Darwin's finches). Set fraction of potential colonists of type 2 to be 0.163.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:118:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L118) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:128:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L128) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **functions should have cyclomatic complexity of less than 15, this has 22.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Lines should not be more than 80 characters.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:130:17:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Use <-, not =, for assignment.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                ^
```
[R/DAISIE_dataprep.R:130:38:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                     ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:49:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Variable and function name style should be snake_case.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                ^
```
[R/DAISIE_dataprep.R:130:51:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                  ^
```
[R/DAISIE_dataprep.R:130:74:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                         ^
```
[R/DAISIE_dataprep.R:130:131:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L130) *style:* **Commas should always have a space after.**
```r
DAISIE_dataprep = function(datatable,island_age,M,number_clade_types = 1,list_type2_clades = NA, prop_type2_pool = "proportional",epss = 1E-5)
                                                                                ^
```
[R/DAISIE_dataprep.R:131:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L131) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/DAISIE_dataprep.R:132:24:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L132) *style:* **Use <-, not =, for assignment.**
```r
  number_colonisations = nrow(datatable)
                       ^
```
[R/DAISIE_dataprep.R:133:12:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L133) *style:* **Use <-, not =, for assignment.**
```r
  datalist = list()
           ^
```
[R/DAISIE_dataprep.R:134:13:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L134) *style:* **Variable and function name style should be snake_case.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
            ^~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:134:28:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L134) *style:* **Put spaces around all infix operators.**
```r
  datatable$Missing_species<-as.numeric(as.character(datatable$Missing_species))
                          ~^~~
```
[R/DAISIE_dataprep.R:135:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L135) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/DAISIE_dataprep.R:136:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L136) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 1)
    ^
```
[R/DAISIE_dataprep.R:137:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L137) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:138:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:138:19:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                  ^
```
[R/DAISIE_dataprep.R:138:36:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                  ~^~
```
[R/DAISIE_dataprep.R:138:48:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Commas should always have a space after.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                               ^
```
[R/DAISIE_dataprep.R:138:59:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Put spaces around all infix operators.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                         ~^~
```
[R/DAISIE_dataprep.R:138:60:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L138) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    datalist[[1]] = list(island_age=island_age,not_present=(M - number_colonisations))
                                                           ^
```
[R/DAISIE_dataprep.R:140:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L140) *style:* **Place a space before left parenthesis, except in a function call.**
```r
  if(number_clade_types == 2)
    ^
```
[R/DAISIE_dataprep.R:141:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L141) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:142:32:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L142) *style:* **Use <-, not =, for assignment.**
```r
    number_type2_colonisations = length(list_type2_clades)
                               ^
```
[R/DAISIE_dataprep.R:143:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L143) *style:* **Lines should not be more than 80 characters.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:143:32:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L143) *style:* **Use <-, not =, for assignment.**
```r
    number_type1_colonisations = number_colonisations - number_type2_colonisations
                               ^
```
[R/DAISIE_dataprep.R:145:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L145) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:146:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L146) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:146:25:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L146) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:146:41:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L146) *style:* **Put spaces around all infix operators.**
```r
      not_present_type1 = DDD::roundn((M/number_colonisations) * number_type1_colonisations) - number_type1_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:147:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L147) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:147:25:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L147) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:147:41:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L147) *style:* **Put spaces around all infix operators.**
```r
      not_present_type2 = DDD::roundn((M/number_colonisations) * number_type2_colonisations) - number_type2_colonisations
                                       ~^~
```
[R/DAISIE_dataprep.R:149:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L149) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:149:25:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L149) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type1 = DDD::roundn(M * (1 - prop_type2_pool)) - number_type1_colonisations
                        ^
```
[R/DAISIE_dataprep.R:150:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L150) *style:* **Lines should not be more than 80 characters.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:150:25:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L150) *style:* **Use <-, not =, for assignment.**
```r
      not_present_type2 = DDD::roundn(M * prop_type2_pool) - number_type2_colonisations
                        ^
```
[R/DAISIE_dataprep.R:152:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L152) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:152:19:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L152) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[1]] = list(island_age = island_age, not_present_type1 = not_present_type1, not_present_type2 = not_present_type2)
                  ^
```
[R/DAISIE_dataprep.R:154:13:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L154) *warning:* **Avoid 1:nrow(...) expressions, use seq_len.**
```r
  for (i in 1:nrow(datatable))
            ^
```
[R/DAISIE_dataprep.R:155:3:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L155) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
  {
  ^
```
[R/DAISIE_dataprep.R:156:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Lines should not be more than 80 characters.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:156:23:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Use <-, not =, for assignment.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                      ^
```
[R/DAISIE_dataprep.R:156:71:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                      ^
```
[R/DAISIE_dataprep.R:156:86:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:107:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:117:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:156:147:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L156) *style:* **Commas should always have a space after.**
```r
    datalist[[i + 1]] = list(colonist_name = as.character(datatable[i,"Clade_name"]),branching_times = NA,stac = NA,missing_species = datatable[i,"Missing_species"], type1or2 = 1)
                                                                                ^
```
[R/DAISIE_dataprep.R:157:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L157) *style:* **Lines should not be more than 80 characters.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:157:14:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L157) *style:* **Use <-, not =, for assignment.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
             ^
```
[R/DAISIE_dataprep.R:157:77:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                            ^
```
[R/DAISIE_dataprep.R:157:97:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L157) *style:* **Commas should always have a space after.**
```r
    the_brts = rev(sort(as.numeric(unlist(strsplit(as.character(datatable[i,"Branching_times"]),split = ",")))))
                                                                                ^
```
[R/DAISIE_dataprep.R:158:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L158) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:159:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Lines should not be more than 80 characters.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
      ^
```
[R/DAISIE_dataprep.R:159:21:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                   ~^~
```
[R/DAISIE_dataprep.R:159:32:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                               ^~
```
[R/DAISIE_dataprep.R:159:33:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                ^
```
[R/DAISIE_dataprep.R:159:46:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                             ^~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:70:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                     ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:84:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~
```
[R/DAISIE_dataprep.R:159:92:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:117:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:132:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:159:160:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Commas should always have a space after.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:159:163:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Put spaces around all infix operators.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ~^~
```
[R/DAISIE_dataprep.R:159:164:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Only use double-quotes.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^~
```
[R/DAISIE_dataprep.R:159:168:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L159) *style:* **Closing curly-braces should always be on their own line, unless it's followed by an else.**
```r
    if(max(the_brts)>island_age){print(paste('Colonisation time of ',max(the_brts),' for ',as.character(datatable[i,"Clade_name"]),' is older than island age',sep=''))}
                                                                                ^
```
[R/DAISIE_dataprep.R:160:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L160) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/DAISIE_dataprep.R:161:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L161) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) == 1)
      ^
```
[R/DAISIE_dataprep.R:161:30:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L161) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) == 1)
                             ^
```
[R/DAISIE_dataprep.R:162:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L162) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:163:1:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L163) *style:* **Lines should not be more than 80 characters.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/DAISIE_dataprep.R:163:41:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L163) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                        ^
```
[R/DAISIE_dataprep.R:163:56:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                       ^
```
[R/DAISIE_dataprep.R:163:69:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L163) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,min(the_brts,island_age - epss))
                                                                    ^
```
[R/DAISIE_dataprep.R:165:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L165) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(length(the_brts) > 1)
      ^
```
[R/DAISIE_dataprep.R:165:29:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L165) *style:* **Trailing whitespace is superfluous.**
```r
    if(length(the_brts) > 1)
                            ^~
```
[R/DAISIE_dataprep.R:166:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L166) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:167:41:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L167) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                        ^
```
[R/DAISIE_dataprep.R:167:56:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L167) *style:* **Commas should always have a space after.**
```r
      datalist[[i + 1]]$branching_times = c(island_age,the_brts)
                                                       ^
```
[R/DAISIE_dataprep.R:169:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L169) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
      ^
```
[R/DAISIE_dataprep.R:169:20:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L169) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Non_endemic_MaxAge")
                   ^
```
[R/DAISIE_dataprep.R:170:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L170) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:171:30:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L171) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 1
                             ^
```
[R/DAISIE_dataprep.R:173:7:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L173) *style:* **Place a space before left parenthesis, except in a function call.**
```r
    if(datatable[i,"Status"] == "Endemic")
      ^
```
[R/DAISIE_dataprep.R:173:20:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L173) *style:* **Commas should always have a space after.**
```r
    if(datatable[i,"Status"] == "Endemic")
                   ^
```
[R/DAISIE_dataprep.R:174:5:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L174) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
    {
    ^
```
[R/DAISIE_dataprep.R:175:30:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L175) *style:* **Use <-, not =, for assignment.**
```r
      datalist[[i + 1]]$stac = 2
                             ^
```
[R/DAISIE_dataprep.R:176:9:](https://github.com/rsetienne/DAISIE/blob/9d75626981d1615eb9d251ad4020454adb707c5e/R/DAISIE_dataprep.R#L176) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      if(max(the_brts)>island_age){
        ^
```


missing parenthesis


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TeamCity Identity and Access Management / identity-hostedpages [Build 1005](https://teamcity.nice.org.uk/viewLog.html?buildId=61749&buildTypeId=IdentityandAccessManagement_IdentityHostedpages) is now running


LGTM


nice commit


it's probably because of this inline style of using a weird reverse hash, extract these to a couple of computed functions and you should be good to go


waterHeaterMixedRefactor (mitchute) - Win64-Windows-10-VisualStudio-16: OK (2581 of 2581 tests passed, 5 test warnings)

Messages:\n
 * 4 tests had: MTD diffs.
 * 5 tests had: RDD diffs.
 * 2 tests had: EIO diffs.

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


Reverting back works !
Thank you


Deployment failed with the following error:

~~~
Unexpected error. Please try again later. ()
~~~


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@rchl I don't mind it but it does look a bit off to me. Perhaps we could make several difefrent sizes for different themes? I'm open for discussion and we may as well just keep it this way.


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Declaration added.


IBM Cloud [toolchain](https://cloud.ibm.com/devops/toolchains/2cef73e4-1589-4b6d-ad52-2bba05849746?env_id=ibm%3Ayp%3Aeu-gb "quando-feb24b"): [Delivery Pipeline](https://cloud.ibm.com/devops/pipelines/c7530d05-4a5f-4670-8c8f-edabfb8207a0 "quando-feb24b") deployed [quando](https://github.com/andrewfstratton/quando/releases/tag/deploy-ibm-yp-eu-gb-a.stratton-sheffield.ac.uk-dev-20191118-170105 "deploy-ibm-yp-eu-gb-a.stratton-sheffield.ac.uk-dev-20191118-170105") to [dev](https://console.bluemix.net/apps/0e3846af-b18d-4b6e-9456-d83a4afc53b2?env_id=ibm:yp:eu-gb "ibm:yp:eu-gb:a.stratton@sheffield.ac.uk:dev"), including this commit


Replace with Moshi or Jackson (Moshi preferred)


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спасибо, поправил


justanak cat


自动构建 [auto-dragalia-f54f2f39.zip](https://circleci.com/gh/NateScarlet/auto-dragalia/742/artifacts/0/home/circleci/project/artifacts/auto-dragalia-f54f2f39.zip)


I made a minor edit to the footer of the home page to make it look nicer.


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TeamCity Identity and Access Management / identity-hostedpages [Build 1005-r0D609D9](https://teamcity.nice.org.uk/viewLog.html?buildId=61749&buildTypeId=IdentityandAccessManagement_IdentityHostedpages) outcome was **SUCCESS**
Summary: Tests passed: 62 Build time: 00:03:05


* [ ] Full build: https://scala-webapps.epfl.ch/sjsjenkins/job/scalajs-main/job/0.6.x/273/
* [ ] Linux CLI tests
* [ ] Windows CLI tests
* [ ] HTML runner tests
* [ ] Source map tests


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Report


This will break the geocoder.


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sure, definitely worth experimenting.


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develop (punyasloka95) - x86_64-MacOS-10.13-clang: OK (1894 of 1894 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


waterHeaterMixedRefactor (mitchute) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-IntegrationCoverage-Debug: OK (674 of 674 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-68.44%25-green.png)


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Midterm Report about scoring system


If the intention is passing macro definitions, the right approach is to put them in `config.h.in` as the others.


You probably want to also Extend Castling on the first move (PV move)
So line 1054 you can add && moveCount==1


Could this also use the default implementation, which forwards to untyped `syntax` anyway? It's not obvious to me that this is more efficient.


> Just curious, why the caveat?

Because that's how it was coded :wink:

> Also imo this should work if the unique constraint covers more columns than the foreign key references.

If the unique constraint covers more columns than the foreign key then the relationship wouldn't be unique. We could enhance it to allow specifying the other columns in direct arguments, but that code doesn't exist yet.


Interesting condition to comply within 30 days... even for API changes?! I can think of following questions:
* What happens if the developers fail to comply within 30 days? Do we have some coercion means? Do developers loose the granted rights?
* What happens if developers are hindered to comply within 30 days, e.g. because of sickness, log holidays?
* What happens if the developers already abandoned the project?

* Does it make sense to have this conformance period, instead of pointing out that Bosch Smart Home cannot be hold liable for the Applications if any of there T&Cs are not respected or misused?


Good. @EdMagoo


@JuliaRegistrator register()


The main propery of this impl is that it's work by definition. The default impl would work because all syntax nodes are the same, which might presumably (although unlikely) change in the future.


Registration pull request created: [JuliaRegistries/General/5545](https://github.com/JuliaRegistries/General/pull/5545)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.5.17 -m "<description of version>" 30f7d53a118436929ba14115e89aa9692aa8535a
git push origin v0.5.17
```


bruh


add this as a first line of function and use it below -

`address_type_to_param = { "unit-address": "control-network", "data-address": "data-network" }`


a


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HONEYDETECTED


not necessarily concurrent, just two calls made from the same originatingSpanId


Oh, brain fart, would need to be the other way round. But it hardly makes sense for a foreign key to refer to more columns than necessary for uniqueness.

Regarding getting the missing columns from arguments, that's what I'm currently working on :-)


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I'm mostly asking because I'm implementing something similar for macros, and didn't want to write the manual impls.


Should there also be an update to <https://download.racket-lang.org/license.html>?


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![](https://github.trello.services/images/mini-trello-icon.png) [5 - SAÍDA DE ESTOQUE - VENDA](https://trello.com/c/C5Iwtqpy/17-5-sa%C3%ADda-de-estoque-venda)


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is this already in the master branch?


![](https://github.trello.services/images/mini-trello-icon.png) [6 - CAIXA  E RELATÓRIO ENTRADA E SAÍDA](https://trello.com/c/1vheqcLf/18-6-caixa-e-relat%C3%B3rio-entrada-e-sa%C3%ADda)


test


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very weird https://github.com/bus-stop/terminus/commit/4b48b34021b2f5832548ba3d2f3114879381b4c3 added this and no change till now with second commit


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develop (punyasloka06) - x86_64-MacOS-10.13-clang: OK (2441 of 2441 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png)


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No problem, I'm glad you appreciate it. Thank you for the kind words. :)


The firmware loading is still unstable, that it would not work after adding a printk(). So I am still tweaking the code. Eventually the idea is to provide the minimal set of regions and host windows, since they are needed for the SOF drivers only.


Commit github


The `name` declaration is still missing here... probably add `let name` in line 477?


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* https://jabs-app-git-master.prakashjaw.now.sh


Yea. Need to get a hold of my versions.

Passing a component as an arg is something you do with higher order
components.

withAuth is my authentication HOC. Basically just does authentication.

withRouter is a nextjs thing.

Basically adds a router param to the requests that tells you where you came
from for UX.

So if you looked at a pay walled page then need to logged in, it would take
you back to the page, authenticate you, and remove the paywall.

On Mon, Nov 18, 2019 at 9:39 AM Matthew White <notifications@github.com>
wrote:

> version 0.0.1, sounds fishy...
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <https://github.com/jonwhitey/builderbook-2/commit/d43722985522d4c35130a5d0544d7bb6f93f0c7a?email_source=notifications&email_token=AE5GX5SYP3XC2QQ3JSFEEU3QUKZM5A5CNFSM4JOVLYP2YY3PNVWWK3TUL52HS4DFVVBW63LNNF2EG33NNVSW45FKMNXW23LFNZ2F62LEZYBCK5QD#commitcomment-36009475>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/AE5GX5RYGNCDJCVL6J5N7NTQUKZM5ANCNFSM4JOVLYPQ>
> .
>


I have no idea why it's not working. Any PR/Fix would be appreciated ...


Dus moet nog bijkomen:
1) plotten van resultaten (zie onafgewerkte def haha)
    dit voor zowel na de hysteresis als na de dbscan
  --> wss wat code voor moeten aanpassen bij whole proces
2) hysteresis parameters overlopen:
     na lijn 31 , twee for loops toevoegen voor de hyperparameters
3) als jullie dit gaan willen gebruiken ga je natuurlijk de image paths moeten veranderen :)


Are you sure this is correct? Before, I've installed these manually to `etc/uncrustify`, and IMO that's more correct place for them. The difference is that `etc` is meant for users to look into and/or add their own files (this case), while `share` is generally meant only to software to look into, and should not be modified by the user.

As a result, if configs are not installed into etc, user would not even know of them unless he uses packaging tool to list all files installed by uncrustify package.

I suggest to either change it to `etc/uncrustify`, or to allow `-c` option to take a config name in addition to full path + implement another option to list available configs.


Antes a permissão em blocoCadastro estava como BLOCO_SALVAR.  Não existe essa permissão no banco.  O nome certo era BLOCO_GRAVAR.


> Hi. Please pick this one [Havoc-OS/android_frameworks_base@9dce4b4](https://github.com/Havoc-OS/android_frameworks_base/commit/9dce4b410f603f2f07a49b5b99c0ebb5188ef14a). It includes a fix for recording button disappearing on high dpi.

Uh thanks! Nice job on this


still missing the `name` declaration...


Hi! This is the friendly automated conda-forge-webservice.

I updated the Github team because of this commit.

- @hadim was added to this feedstock maintenance team.

You should get push access to this feedstock and CI services.

Feel free to join the community [chat room](https://gitter.im/conda-forge/conda-forge.github.io).

NOTE: Please make sure to not push to the repository directly.
      Use branches in your fork for any changes and send a PR.
      More details [here](https://conda-forge.org/docs/maintainer/updating_pkgs.html#forking-and-pull-requests)


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Created multidev environment [pr-110](https://dashboard.pantheon.io/sites/afa5510e-3253-42b8-b3a4-35622f7e9eae#pr-110) for reits-across-america-d8.


Thử commit


@kadler

To make this work properly I think `pool.attach` would now have to return a `Promise`. To avoid race conditions.


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Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `script` property.
~~~


The name declaration here doesn't cover for the scope in line 1098...


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*insert some stupid pepe emoji here*


ss


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* https://pansy-git-master.walrus-plus.now.sh


`self.wait_for_unit` calls `self.get_unit_info`, which calls `self.systemctl`, which calls `self.execute`, which calls `self.connect`, which no-ops if it's already connected, but otherwise will start up the VM.

This matches the behaviour of the perl test driver, it probably just isn't very obvious :-)


TeamCity Glyssen / Glyssen pull requests [Build *.*.673.d126e6dced17e2e793634e9da99b033e40707bbb](https://build.palaso.org/viewLog.html?buildId=168900&buildTypeId=Glyssen_GlyssenPullRequests2) outcome was **UNKNOWN**
Summary: Canceled Build time: 00:00:31


This made my day. Thanks.


It should be noted, that except in very simple cases, the key space will always be split into multiple subspaces each of which will be described by a "prefix". So, it could be possible to add a `prefix` argument to `(okvs pack) pack` procedure and unpack the prefix when debugging.


TeamCity Glyssen / Glyssen pull requests [Build *.*.674.d126e6dced17e2e793634e9da99b033e40707bbb](https://build.palaso.org/viewLog.html?buildId=168901&buildTypeId=Glyssen_GlyssenPullRequests2) outcome was **FAILURE**
Summary: Exit code 1 (Step: Release - Build (MSBuild)) (new) Build time: 00:01:12


`EObject grammarRule` is not used.


I'd wait with establishing new conventions, or changing behaviour until the tests are migrated to python - then we only need to change one driver…


Before that, `pack` procedure must be changed to take a list as first argument instead of rest arguments.


this declaration is not useful as it is only applied for the `if` scope here.


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❌ [Build was (probably) aborted](https://jenkins.internalx.com/job/macios/job/master/992/display/redirect)

🔥 [Jenkins job](https://jenkins.internalx.com/job/macios/job/master/992/display/redirect) (on internal Jenkins) failed in stage(s) 'Test run, Test run' 🔥

✅ [Build succeeded](https://jenkins.internalx.com/job/macios/job/master/992//console)
✅ Packages:
* [xamarin.ios-13.15.0.84.pkg (Not notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/package/xamarin.ios-13.15.0.84.pkg)
* [xamarin.mac-6.15.0.84.pkg (Not notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/package/xamarin.mac-6.15.0.84.pkg)
* [xamarin.ios-13.15.0.84.pkg (Notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/package/notarized/xamarin.ios-13.15.0.84.pkg)
* [xamarin.mac-6.15.0.84.pkg (Notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/package/notarized/xamarin.mac-6.15.0.84.pkg)

✅ [API Diff (from stable)](http://xamarin-storage/jenkins/xamarin-macios/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/jenkins-results/api-diff/index.html)
✅ [API Diff (from PR only)](http://xamarin-storage/jenkins/xamarin-macios/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/jenkins-results/apicomparison/api-diff.html) (no change)
✅ [Generator Diff](http://xamarin-storage/jenkins/xamarin-macios/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/jenkins-results/generator-diff/index.html) (no change)
🔥 [Test run failed](http://xamarin-storage/jenkins/xamarin-macios/master/4aa269bbdb98370ff74f643c9d0cf6be25964fae/992/jenkins-results/tests/index.html) 🔥

# Test results

<details>
<summary>1 tests failed, 163 tests passed.</summary>

## Failed tests

 * monotouch-test/watchOS 32-bits - simulator/Debug: Crashed
</details>


then what is `i` for ?


Hello, I can not download Labs 3 and 4. Please provide guidance.

Thanks    Benita


This was a result of me not noticing the `speed = speed or 1` when speed is evaluated. So, uhhh, don't sweat it.


still missing declaration ...


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* https://baseweb-git-master.uber-ui-platform.now.sh


Created multidev environment [dgreat#pr-457](https://dashboard.pantheon.io/sites/41cad7fe-472d-43a9-a470-d391b9622376#pr-457).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-457-dgreat.pantheonsite.io/)


This Java file contains code for Flood Fill Algorithm


- npm i gh-pages
add followings in package.json
- "homepage": "https://nilipta.github.io/react-front-to-back",
- "scripts": {
    "deploy":"npm run build&&gh-pages -d build",
    "start": "react-scripts start",
    "build": "react-scripts build",
    "test": "react-scripts test",
    "eject": "react-scripts eject"
  },
- npm run deploy
-then enter password and username to get the url and see the page is hosted...


If you mean lifecycle hook, it should not be inside methods


Successfully deployed to following URLs:

* https://deploy-1cpgdokvk.now.sh
* https://deploy-spicy-smell.now.sh
* https://deploy.esoshyki.now.sh
* https://deploy-git-master.esoshyki.now.sh


Nice, thank you!


oke


this only partially fixes the problem. now a future leave type is selectable but not allocatable. on allocation creation it still raises.


Successfully deployed to following URLs:

* https://ecom-next-44986mfcg.now.sh
* https://ecom-next.now.sh
* https://ecom-next.nickfoden.now.sh
* https://ecom-next-git-master.nickfoden.now.sh


Deployment failed with the following error:

~~~
Couldn't parse JSON file /tmp/i1oYlbGhhbItiJigmDn6IZDV/repo/now.json.
~~~


`.each.with_index(1)` чтобы не добавлять внутри блока единицу


Hi, why don't you just save a bit of work and try the [v2.0 branch](https://packagist.org/packages/chillerlan/php-qrcode#2.0.6)? Also, PHP 7.1 is EOL in about 2 weeks!


Не нашел где используется? (`delete_station_validate!` и `add_station_validate!`)


Successfully deployed to following URLs:

* https://numsgil-co-m4iwav2x0.now.sh
* https://numsgil.co
* https://numsgil-co.numsgil.now.sh
* https://numsgil-co-git-master.numsgil.now.sh


nvm, not resolved


Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `script` property.
~~~


Successfully deployed to following URLs:

* https://deploy-loaah5sly.now.sh
* https://deploy-spicy-smell.now.sh
* https://deploy.esoshyki.now.sh
* https://deploy-git-master.esoshyki.now.sh


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/terminus-build-tools-plugin/master/assets/images/visit-site-36.png)](https://pr-7-civitest1.pantheonsite.io/)

Created multidev environment [pr-7](https://dashboard.pantheon.io/sites/a3e36a20-a644-47e6-8788-fa973ff3c7a0#pr-7) for civitest1.


Think this is gonna get me caught up to master


TeamCity Glyssen / Glyssen pull requests [Build *.*.675.d126e6dced17e2e793634e9da99b033e40707bbb](https://build.palaso.org/viewLog.html?buildId=168905&buildTypeId=Glyssen_GlyssenPullRequests2) outcome was **FAILURE**
Summary: Exit code 1 (Step: Release - Build (MSBuild)) Build time: 00:01:00


bla bla


В задании есть пункт:
`Убрать из классов все puts`
Это относится к классам моделей, puts/gets должны быть изолированы в интерфейсе, а сами модели возвращать только "чистые" данные


@Vizvezdenec
Sorry, i have seen it only now, but i approved your LTC. Good luck!


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/terminus-build-tools-plugin/master/assets/images/visit-site-36.png)](https://pr-19-tgill-d8-project.pantheonsite.io/)

Created multidev environment [pr-19](https://dashboard.pantheon.io/sites/71194d35-b1ab-4274-9241-ac9f5e225e69#pr-19) for tgill-d8-project.


Successfully deployed to following URLs:

* https://frontend-cqdqun6ed.now.sh
* https://frontend-mocha-eight.now.sh
* https://frontend.med-cabinet-2.now.sh
* https://frontend-git-master.med-cabinet-2.now.sh


Successfully deployed to following URLs:

* https://deploy-m8xvqpp6s.now.sh
* https://deploy-spicy-smell.now.sh
* https://deploy.esoshyki.now.sh
* https://deploy-git-master.esoshyki.now.sh


May be the issue in naming? `notifyStart` -> `notifyStarted`


Successfully deployed to following URLs:

* https://resume-9hfe6seu8.now.sh
* https://resume-rho-blond.now.sh
* https://resume.alexruzzarin.now.sh
* https://resume-git-master.alexruzzarin.now.sh


Successfully deployed to following URLs:

* https://tourvo-apollo-hyc2f6i8g.now.sh
* https://tourvo-apollo-delta-sepia.now.sh
* https://tourvo-apollo.ppromerojr.now.sh
* https://tourvo-apollo-git-master.ppromerojr.now.sh


I just happened upon this commit because I noticed you had recently updated this plugin. Maybe you didn't mean to include your own username in here?

Great plugin 👍.


Successfully deployed to following URLs:

* https://ripe-commons-pluginus-qjzkps4lb.now.sh
* https://ripe-commons-pluginus.platforme.now.sh
* https://ripe-commons-pluginus-git-master.platforme.now.sh


I don't know if there is a way to configure semantic release to add every commit to the changelog. It seems like that might make the changelog harder to read since some changes (like readme or ci changes) aren't really relevant. I think it would be best to point people to a CONTRIBUTING.md file with the correct syntax.


Successfully deployed to following URLs:

* https://create-react-app-functions-a1te6yy3t.now.sh
* https://create-react-app-functions-phi-seven.now.sh
* https://create-react-app-functions.dobleub.now.sh
* https://create-react-app-functions-git-master.dobleub.now.sh


[Dan Ungureanu posted](https://review.discourse.org/t/fix-users-who-have-topic-keys-should-also-be-invited/7068/5):

 https://review.discourse.org/t/dev-add-test-for-job-ensuring-consistency/7115


[Dan Ungureanu posted](https://review.discourse.org/t/fix-show-notice-if-context-is-insecure/6976/5):

 https://review.discourse.org/t/fix-show-better-error-messages-when-decrypting-posts/7116


Deployment failed with the following error:

~~~
You defined 1 build that did not match any source files (please ensure they are NOT defined in .nowignore):
~~~


ZEIT Now cannot deploy this project to production due to following domain related issues:

 * `www.trapteamnz.tk`(for alias `www.trapteamnz.tk`) is not found inside your account. [Add it](https://zeit.co/dashboard/domains?action=add&domain=www.trapteamnz.tk).


OK, I will add this to the doc and try to fix the wrongs, there.


if you remove the fields arg, then it's bringing back all of the fields for each rather than just the ID. Does that matter?


Successfully deployed to following URLs:

* https://tourvo-apollo-1eej3ahzo.now.sh
* https://tourvo-apollo-delta-sepia.now.sh
* https://tourvo-apollo.ppromerojr.now.sh
* https://tourvo-apollo-git-master.ppromerojr.now.sh


Added. Also, since var is function scoped as opposed to let being block scoped, I think it is clearer (and easier as far as debugging goes) to change all the `var name` to `var let`. I will go ahead and make this change in this file.


Require touch bug fixed for global use


Added.


Artículos clickeables, no errores sindicales


sorry, misclick


Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `script` property.
~~~


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-120-gk-8.pantheonsite.io/)

Created multidev environment [pr-120](https://dashboard.pantheon.io/sites/5cbd78f8-3a96-492a-beb0-f892421708d8#pr-120) for gk-8.


Do we actually need this "default" readme 🤔


Successfully deployed to following URLs:

* https://tourvo-apollo-30532918l.now.sh
* https://tourvo-apollo-delta-sepia.now.sh
* https://tourvo-apollo.ppromerojr.now.sh
* https://tourvo-apollo-git-master.ppromerojr.now.sh


Можно было поставить 1k, 2k, 4k и т.д. вместо громады цифр.


TeamCity Glyssen / Glyssen pull requests [Build *.*.676.638c8041e69ca5096d18813efb273e6dab877158](https://build.palaso.org/viewLog.html?buildId=168906&buildTypeId=Glyssen_GlyssenPullRequests2) outcome was **SUCCESS**
Summary: Tests passed: 2361, ignored: 18 Build time: 00:07:25


lgtm - thanks @ColinSullivan1


comment


${maps.isEmpty(map)}
のところでエラーになるので修正お願いいたします。


let name added to top of function just below function header.


Successfully deployed to following URLs:

* https://portfolio-5hnmizb3v.now.sh
* https://yuwen-li.com
* https://www.yuwen-li.com
* https://portfolio.muzlee1113.now.sh
* https://portfolio-git-master.muzlee1113.now.sh


Successfully deployed to following URLs:

* https://jsproject-d6jg9014i.now.sh
* https://myproject.now.sh
* https://jsproject.smilejke1.now.sh
* https://jsproject-git-master.smilejke1.now.sh


Minor: `question_i` > `question`


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/terminus-build-tools-plugin/master/assets/images/visit-site-36.png)](https://pr-14-bfr-sandbox.pantheonsite.io/)

Created multidev environment [pr-14](https://dashboard.pantheon.io/sites/6f19af2d-ef7f-4605-af0e-db1fbfca573c#pr-14) for bfr-sandbox.


Can we do `Answer(question)`? I don't think `all_question` is needed.
Minor: `var_answer` -> `answer`


Successfully deployed to following URLs:

* https://ripe-components-vue-j6sh8r8ff.now.sh
* https://ripe-components-vue.platforme.now.sh
* https://ripe-components-vue-git-master.platforme.now.sh


shit, didn't mean to push this directly sorry @orta


xzcx


Remove


It fixes OVMF but Platforms still has a bug:
ERROR - <class 'edk2toollib.uefi.edk2.parsers.dsc_parser.DscParser'>: Unknown value: gMinPlatformPkgTokenSpaceGuid.PcdBootStage <class 'str'>
...
  File "c:\git\edk2-pytool-library\edk2toollib\uefi\edk2\parsers\dsc_parser.py", line 246, in __ProcessDefines                                                                                (line, add) = self.__ParseDefineLine(l)                                                                                File "c:\git\edk2-pytool-library\edk2toollib\uefi\edk2\parsers\dsc_parser.py", line 167, in __ParseDefineLine                                                                                if(self.ProcessConditional(line_resolved)):                                                                                File "c:\git\edk2-pytool-library\edk2toollib\uefi\edk2\parsers\base_parser.py", line 310, in ProcessConditional                                                                                con = self.ComputeResult(tokens[1].strip(), tokens[2].strip(), tokens[3].strip())                                                                                File "c:\git\edk2-pytool-library\edk2toollib\uefi\edk2\parsers\base_parser.py", line 160, in ComputeResult                                                                                raise ValueError("Unknown value")                                                                                ValueError: Unknown value


Created multidev environment [dgreat#pr-458](https://dashboard.pantheon.io/sites/41cad7fe-472d-43a9-a470-d391b9622376#pr-458).

[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/ci-drops-8/0.1.0/data/img/visit-site-36.png)](https://pr-458-dgreat.pantheonsite.io/)


You mean it really work? Or we need a lot of rework to make it work?

What about plugin? Do they all need python 3 rewrite? Including for domes depending on other lib a lib that works on python3


This is actually not test covered, cf. https://codecov.io/gh/bpmn-io/diagram-js/commit/0ad106622bba40e80fe2a5ac858a92dbf9488f36.

Not sure what [this spec tests](https://github.com/bpmn-io/diagram-js/commit/0ad106622bba40e80fe2a5ac858a92dbf9488f36#diff-aaa55ad67fc67521dcfbfdf3b6cc259aR481), something different it seems like. @philippfromme could you have a look?

Spotted because of failing CI on `develop`.


Hold on though - `ModuleItem` does exactly this, as does `NominalDef`


зачем?


[core] feat(EditableText): add alwaysRenderInput experimental feature (#3841)

Previews: documentation | landing | table