[inst/example/long_script.R:58:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/long_script.R#L58) *style:* **Variable and function name style should be snake_case.**
```r
fit.23 <- lm(x2 ~ x3, data = data.frame(x2[, 1], x3[, 1]))
^~~~~~
```
[inst/example/long_script.R:64:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/long_script.R#L64) *style:* **Variable and function name style should be snake_case.**
```r
fit.xx <- lm(A~B, data = x)
^~~~~~
```
[inst/example/long_script.R:70:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/long_script.R#L70) *style:* **Variable and function name style should be snake_case.**
```r
fit_sqrt_A <- lm(I(sqrt(A))~B, data = x)
^~~~~~~~~~
```
[inst/example/simple_script.R:10:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/simple_script.R#L10) *style:* **Variable and function name style should be snake_case.**
```r
fit15.aov <- aov(V1 ~ V2 + V5, data = dat)
^~~~~~~~~
```
[inst/example/simple_script.R:13:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/simple_script.R#L13) *style:* **Variable and function name style should be snake_case.**
```r
tab.12 <- summary(fit12)
^~~~~~
```
[inst/example/simple_script.R:14:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/simple_script.R#L14) *style:* **Variable and function name style should be snake_case.**
```r
tab.13 <- summary(fit13)
^~~~~~
```
[inst/example/simple_script.R:15:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/simple_script.R#L15) *style:* **Variable and function name style should be snake_case.**
```r
tab.14 <- summary(fit14)
^~~~~~
```
[inst/example/simple_script.R:16:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/inst/example/simple_script.R#L16) *style:* **Variable and function name style should be snake_case.**
```r
tab.15 <- append(fit15.aov, tab.14)
^~~~~~
```
[tests/testthat/lib_test.R:13:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/lib_test.R#L13) *style:* **Variable and function name style should be snake_case.**
```r
fit15.aov <- aov(V1 ~ V2 + V5, data = dat)
^~~~~~~~~
```
[tests/testthat/lib_test.R:16:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/lib_test.R#L16) *style:* **Variable and function name style should be snake_case.**
```r
tab.12 <- summary(fit12)
^~~~~~
```
[tests/testthat/lib_test.R:17:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/lib_test.R#L17) *style:* **Variable and function name style should be snake_case.**
```r
tab.13 <- summary(fit13)
^~~~~~
```
[tests/testthat/lib_test.R:18:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/lib_test.R#L18) *style:* **Variable and function name style should be snake_case.**
```r
tab.14 <- summary(fit14)
^~~~~~
```
[tests/testthat/lib_test.R:19:1:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/lib_test.R#L19) *style:* **Variable and function name style should be snake_case.**
```r
tab.15 <- append(fit15.aov, tab.14)
^~~~~~
```
[tests/testthat/test-main.R:3:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L3) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:5:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L5) *style:* **Variable and function name style should be snake_case.**
```r
    clean.simple.out <- clean(simple.script, "out")
    ^~~~~~~~~~~~~~~~
```
[tests/testthat/test-main.R:14:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L14) *style:* **Variable and function name style should be snake_case.**
```r
    filepath.out <- get_libs(script)
    ^~~~~~~~~~~~
```
[tests/testthat/test-main.R:31:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L31) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:33:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L33) *style:* **Variable and function name style should be snake_case.**
```r
    format.simple.out <- clean(simple.script, "out", format = FALSE)
    ^~~~~~~~~~~~~~~~~
```
[tests/testthat/test-main.R:40:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L40) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- readScript(script)
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:42:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L42) *style:* **Variable and function name style should be snake_case.**
```r
    clean.multi <- clean(simple.script, vars, format = FALSE)
    ^~~~~~~~~~~
```
[tests/testthat/test-main.R:48:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L48) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:50:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L50) *style:* **Variable and function name style should be snake_case.**
```r
    novars.out <- capture.output(clean(simple.script))
    ^~~~~~~~~~
```
[tests/testthat/test-main.R:55:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L55) *style:* **Variable and function name style should be snake_case.**
```r
    long.script <- system.file(
    ^~~~~~~~~~~
```
[tests/testthat/test-main.R:58:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L58) *style:* **Variable and function name style should be snake_case.**
```r
    clean.x <- clean(long.script, "x")
    ^~~~~~~
```
[tests/testthat/test-main.R:59:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L59) *style:* **Variable and function name style should be snake_case.**
```r
    clean.x2 <- clean(long.script, "x2")
    ^~~~~~~~
```
[tests/testthat/test-main.R:60:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L60) *style:* **Variable and function name style should be snake_case.**
```r
    clean.x3 <- clean(long.script, "x3")
    ^~~~~~~~
```
[tests/testthat/test-main.R:61:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L61) *style:* **Variable and function name style should be snake_case.**
```r
    clean.x2x3 <- clean(long.script, c("x2", "x3"))
    ^~~~~~~~~~
```
[tests/testthat/test-main.R:62:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L62) *style:* **Variable and function name style should be snake_case.**
```r
    clean.z <- clean(long.script, "z")
    ^~~~~~~
```
[tests/testthat/test-main.R:69:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L69) *style:* **Variable and function name style should be snake_case.**
```r
    env.long <- new.env()
    ^~~~~~~~
```
[tests/testthat/test-main.R:70:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L70) *style:* **Variable and function name style should be snake_case.**
```r
    env.x <- new.env()
    ^~~~~
```
[tests/testthat/test-main.R:71:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L71) *style:* **Variable and function name style should be snake_case.**
```r
    env.x2 <- new.env()
    ^~~~~~
```
[tests/testthat/test-main.R:72:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L72) *style:* **Variable and function name style should be snake_case.**
```r
    env.x3 <- new.env()
    ^~~~~~
```
[tests/testthat/test-main.R:73:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L73) *style:* **Variable and function name style should be snake_case.**
```r
    env.x2x3 <- new.env()
    ^~~~~~~~
```
[tests/testthat/test-main.R:74:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L74) *style:* **Variable and function name style should be snake_case.**
```r
    env.z <- new.env()
    ^~~~~
```
[tests/testthat/test-main.R:102:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L102) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:105:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L105) *style:* **Variable and function name style should be snake_case.**
```r
    var.files <- paste0(vars, "_clean.R")
    ^~~~~~~~~
```
[tests/testthat/test-main.R:106:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L106) *style:* **Variable and function name style should be snake_case.**
```r
    var.vars <- list()
    ^~~~~~~~
```
[tests/testthat/test-main.R:108:9:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L108) *style:* **Variable and function name style should be snake_case.**
```r
        var.clean <- clean(simple.script, vars[i])
        ^~~~~~~~~
```
[tests/testthat/test-main.R:110:9:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L110) *style:* **Variable and function name style should be snake_case.**
```r
        var.env <- new.env()
        ^~~~~~~
```
[tests/testthat/test-main.R:115:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L115) *style:* **Variable and function name style should be snake_case.**
```r
    var.check <- logical()
    ^~~~~~~~~
```
[tests/testthat/test-main.R:127:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L127) *style:* **Variable and function name style should be snake_case.**
```r
    long.script <- system.file(
    ^~~~~~~~~~~
```
[tests/testthat/test-main.R:130:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L130) *style:* **Variable and function name style should be snake_case.**
```r
    var.files <- paste0(vars, "_clean.R")
    ^~~~~~~~~
```
[tests/testthat/test-main.R:131:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L131) *style:* **Variable and function name style should be snake_case.**
```r
    var.vars <- list()
    ^~~~~~~~
```
[tests/testthat/test-main.R:133:9:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L133) *style:* **Variable and function name style should be snake_case.**
```r
        var.clean <- clean(long.script, vars[i])
        ^~~~~~~~~
```
[tests/testthat/test-main.R:135:9:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L135) *style:* **Variable and function name style should be snake_case.**
```r
        var.env <- new.env()
        ^~~~~~~
```
[tests/testthat/test-main.R:140:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L140) *style:* **Variable and function name style should be snake_case.**
```r
    var.check <- logical()
    ^~~~~~~~~
```
[tests/testthat/test-main.R:154:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L154) *style:* **Variable and function name style should be snake_case.**
```r
    glist.out <- Rclean:::get_path(vl, "out")
    ^~~~~~~~~
```
[tests/testthat/test-main.R:162:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L162) *style:* **Variable and function name style should be snake_case.**
```r
    noid.out <- testthat:::capture_output({Rclean:::get_path(vl)},
    ^~~~~~~~
```
[tests/testthat/test-main.R:170:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L170) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:172:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L172) *style:* **Variable and function name style should be snake_case.**
```r
    output.cap <- capture.output(
    ^~~~~~~~~~
```
[tests/testthat/test-main.R:180:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L180) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:182:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L182) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- readScript(simple.script)
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:183:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L183) *style:* **Variable and function name style should be snake_case.**
```r
    output.cap <- capture.output(
    ^~~~~~~~~~
```
[tests/testthat/test-main.R:190:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L190) *style:* **Variable and function name style should be snake_case.**
```r
    simple.script <- system.file(
    ^~~~~~~~~~~~~
```
[tests/testthat/test-main.R:201:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L201) *style:* **Variable and function name style should be snake_case.**
```r
    keep.test <- readLines("clean.simple.test.R")
    ^~~~~~~~~
```
[tests/testthat/test-main.R:212:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L212) *style:* **Variable and function name style should be snake_case.**
```r
    vars.test <- get_vars(script)
    ^~~~~~~~~
```
[tests/testthat/test-main.R:223:5:](https://github.com/MKLau/Rclean/blob/879db9c3e7aa357acdaaf811f32e14cf910a271f/tests/testthat/test-main.R#L223) *style:* **Variable and function name style should be snake_case.**
```r
    vars.test <- get_vars(script)
    ^~~~~~~~~
```


all tests pass:
success: https://travis-ci.org/stellar/stellar-core/builds/633911940?utm_source=github_status&utm_medium=notification


:shipit:


Successfully deployed to following URLs:

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delete


Hello, I read your message in DW, to start a good job with the extractor, I like the names of the variables you put in it, but we have something in common I also extracted them in obj model for a long time, and I also wanted to convert them to UDMF but not I was successful because you have to use triangular sectors for the floor and also the model has sloping walls and you can not in udmf, the images you see of the IPhone version are actually a model with the help of things, but that model is a version modified from md3 to receive colors at the vertices, such as the models of orcs and elves DS. But I will be attentive in the future ;)


create


<html>
    <head>
       <title>Alan Smithee</title>

       <link rel="stylesheet" type="text/css" href="./dist/css/main.css">
    </head>
    <body>
        <nav>


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Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `scripts` property.
~~~


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direct download


Failed to assign a domain to your deployment due to the following error:

~~~
We could not create a certificate for btngiadinh.com because HTTP pretest failed. Please ensure the CNAME for btngiadinh.com points to "alias.zeit.co". You can find more information at https://err.sh/now-cli/cant-solve-challenge.
~~~

([Learn more](https://zeit.co/nampdn96/btngd-website/agkbfk1n0) or [visit](https://btngd-website-agkbfk1n0.now.sh) the non-aliased deployment)


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* https://jobify-git-master.moacyr.now.sh


might warrant an extension method?


that's a reference to any other table?


of course :man_facepalming:


delete "/omit-if-no-ref/" for fix compile problem


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Update from sunxi-next


question 1: why `goroutineDoneOrBlocked()` gets invoked for 2 times here?
question 2: if `doneCh` has a value, which means the context gets closed right after the request has been submitted to a queue, shall we also revert `qs.totRequestsExecuting` while we set the decision to cancel, which means execute  `qs.totRequestsExecuting--` here?


Correct, it seems that the rst parser doesn't support lists like these - in markdown it works. It's fixed.


the bookmark is a reference to one of three tables indicated by the type; entr for words (type 0), character for kanji (type 1) and sentences (type 2).


Add internal audio codec for M2-Ultra


not sure what you mean here


gs.Spec.Template.Annotations should also be considered


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* https://ui-eight-eta.now.sh
* https://ui.charlietango.now.sh
* https://ui-git-master.charlietango.now.sh


程序闪退啊，哥


httpClient工具类


I believe there's a bug here, `user.two_factor_token` won't work if user specified a different naming convention in the config.


Successfully deployed to following URLs:

* https://notespacer-otwjbqui0.now.sh
* https://notespacer.now.sh
* https://notespacer.golubs.now.sh
* https://notespacer-git-master.golubs.now.sh


Fortsatt litt usikker på hvordan hooks skal lages og brukes. Tror det kan skrives som én hook.
```
import useAppStore from './useAppStore';
import { StatusTyper } from '../types/sykmeldingTypes';

export const useSelectSykmeldinger = () => {
    const { sykmeldinger } = useAppStore();

    if (!sykmeldinger) {
        return { nyeSykmeldinger: null, tidligereSykmelding: null};
    }

    const nyeSykmeldinger = sykmeldinger.filter(({ status }) => status.status === StatusTyper.NY);
    const tidligereSykmeldinger = sykmeldinger.filter(({ status }) => status.status !== StatusTyper.NY);

    return { nyeSykmeldinger, tidligereSykmeldinger }
};
```

og brukes som

```
const { nyeSykmeldinger, tidligereSykmeldinger } = useSelectSykmeldinger();
```


TeamCity Identity and Access Management / Identity - .NET Standard 2.0 Nuget (SDK) [Build 379-IDAM-195-NETFramewor](https://teamcity.nice.org.uk/viewLog.html?buildId=63781&buildTypeId=IdentityandAccessManagement_IdentityAuthenticationSdk) outcome was **FAILURE**
Summary:
       "/etc/teamcity/work/44fd104bdf8e4cf7/NICE.Identity.Authentication.Sdk/NICE.Identity.Authentication.Sdk.csproj" (default target) (1) ->
       "/etc/teamcity/work/44fd104bdf8e4cf7/NICE.Identity.Authentication.Sdk/NICE.Identity.Authentication.S... Build time: 00:01:19


Successfully deployed to following URLs:

* https://equilibre-kg1uanodt.now.sh
* https://equilibre-hazel-five.now.sh
* https://equilibre.ethanohayon.now.sh
* https://equilibre-git-master.ethanohayon.now.sh


TeamCity Identity and Access Management / Identity - .NET Standard 2.0 Nuget (SDK) [Build 380-IDAM-195-NETFramewor](https://teamcity.nice.org.uk/viewLog.html?buildId=63782&buildTypeId=IdentityandAccessManagement_IdentityAuthenticationSdk) outcome was **FAILURE**
Summary:
       "/etc/teamcity/work/44fd104bdf8e4cf7/NICE.Identity.Authentication.Sdk/NICE.Identity.Authentication.Sdk.csproj" (default target) (1) ->
       "/etc/teamcity/work/44fd104bdf8e4cf7/NICE.Identity.Authentication.Sdk/NICE.Identity.Authentication.S... Build time: 00:00:38


Successfully deployed to following URLs:

* https://portfolio-v30xo4d5n.now.sh
* https://portfolio-tau-silk.now.sh
* https://alexteshome.com
* https://portfolio.alexteshome.now.sh
* https://portfolio-git-master.alexteshome.now.sh


We can update the release and changelog though. @G-Rath wanna do it?


Successfully deployed to following URLs:

* https://bestie-bvifr05m4.now.sh
* https://bestie.now.sh
* https://bestie.pashatay.now.sh
* https://bestie-git-master.pashatay.now.sh


Successfully deployed to following URLs:

* https://hackton-frontend-84wp5resh.now.sh
* https://hackton-frontend.now.sh
* https://hackton.co
* https://hackton-frontend.hackton.now.sh
* https://hackton-frontend-git-develop.hackton.now.sh


Successfully deployed to following URLs:

* https://bkc-test-calculator-b4kqmxc73.now.sh
* https://bkc-test-calculator.mishaskopenko1.now.sh
* https://bkc-test-calculator-git-master.mishaskopenko1.now.sh


A alteração será realizada


more points I thought of in the shower 🚿
1. `numPendingAcquisitions` should be per `poolKey`
2. should also modify `acquireNowExact` and use shared logic


Successfully deployed to following URLs:

* https://react-basket-cupcake-test-4fc9nn5s7.now.sh
* https://react-basket-cupcake-test.mishaskopenko1.now.sh
* https://react-basket-cupcake-test-git-master.mishaskopenko1.now.sh


Successfully deployed to following URLs:

* https://komoot-test-bk3fajezp.now.sh
* https://komoot-edge.now.sh
* https://komoot-test.pke.now.sh
* https://komoot-test-git-develop.pke.now.sh


plantFluidToFluidHX (mitchute) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-UnitTestsCoverage-Debug: OK (1254 of 1254 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-43.54%25-green.png)


The following doc(s) have been deployed to the [localdevdoc](https://localdevdoc-static-docs.pantheonsite.io/docs) Multidev environment:
- [/docs/localdev](https://localdevdoc-static-docs.pantheonsite.io/docs/localdev)


Successfully deployed to following URLs:

* https://fe-restuarant-passport-4-m8teh5lsm.now.sh
* https://fe-restuarant-passport-4.now.sh
* https://fe-restuarant-passport-4.restaurantpassport.now.sh
* https://fe-restuarant-passport-4-git-master.restaurantpassport.now.sh


Is there a simple way to create a title element on the button that is created?

(Thanks so much for the alt tag inclusion!)


Successfully deployed to following URLs:

* https://react-api-kuda-go-ftyokz1i2.now.sh
* https://react-api-kuda-go.mishaskopenko1.now.sh
* https://react-api-kuda-go-git-master.mishaskopenko1.now.sh


Failed to assign a domain to your deployment due to the following error:

~~~
We could not create a certificate for schultstefan.de because HTTP pretest failed. Please ensure the CNAME for schultstefan.de points to "alias.zeit.co". You can find more information at https://err.sh/now-cli/cant-solve-challenge.
~~~

([Learn more](https://zeit.co/schubidu/schultstefande/1djl1x6lt) or [visit](https://schultstefande-1djl1x6lt.now.sh) the non-aliased deployment)


Will do


What's the time complexity of your code


Failed to assign a domain to your deployment due to the following error:

~~~
We could not create a certificate for schultstefan.de because HTTP pretest failed. Please ensure the CNAME for schultstefan.de points to "alias.zeit.co". You can find more information at https://err.sh/now-cli/cant-solve-challenge.
~~~

([Learn more](https://zeit.co/schubidu/schultstefande/o29vh8bgb) or [visit](https://schultstefande-o29vh8bgb.now.sh) the non-aliased deployment)


Successfully deployed to following URLs:

* https://resir014-stream-overlays-6jfd6t4yp.now.sh
* https://resir014-stream-overlays.now.sh
* https://resir014-stream-overlays.resir014.now.sh
* https://resir014-stream-overlays-git-master.resir014.now.sh


Successfully deployed to following URLs:

* https://egbloom-e9fribxm3.now.sh
* https://egbloom.com
* https://www.egbloom.com
* https://egbloom.bloom.now.sh
* https://egbloom-git-master.bloom.now.sh


Successfully deployed to following URLs:

* https://excalidraw-ecyb2evoa.now.sh
* https://excalidraw.now.sh
* https://excalidraw.vjeux.now.sh
* https://excalidraw-git-master.vjeux.now.sh


Successfully deployed to following URLs:

* https://ottastudio-website-6t70ci5kx.now.sh
* https://ottastudio-website.now.sh
* https://trial.ottastudio.com
* https://ottastudio-website-v5.now.sh
* https://ottastudio-website.ottastudio.now.sh
* https://ottastudio-website-git-master.ottastudio.now.sh


DisplayTerrainTypes > ShowTerrainName ?
ShowWorldmapTerrain
... more variants


Successfully deployed to following URLs:

* https://plume-ui-hlghqg8hj.now.sh
* https://plume-ui.now.sh
* https://plume-ui.initial-inc.now.sh
* https://plume-ui-git-master.initial-inc.now.sh


❌ [Build was (probably) aborted](https://jenkins.internalx.com/job/macios/job/d16-5/41/display/redirect)

🔥 [Jenkins job](https://jenkins.internalx.com/job/macios/job/d16-5/41/display/redirect) (on internal Jenkins) failed in stage(s) 'Test run, Test run' 🔥

✅ [Build succeeded](https://jenkins.internalx.com/job/macios/job/d16-5/41//console)
✅ Packages:
* [xamarin.ios-13.14.1.18.pkg (Not notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/package/xamarin.ios-13.14.1.18.pkg)
* [xamarin.mac-6.14.1.18.pkg (Not notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/package/xamarin.mac-6.14.1.18.pkg)
* [xamarin.ios-13.14.1.18.pkg (Notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/package/notarized/xamarin.ios-13.14.1.18.pkg)
* [xamarin.mac-6.14.1.18.pkg (Notarized)](https://bosstoragemirror.blob.core.windows.net/wrench/jenkins/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/package/notarized/xamarin.mac-6.14.1.18.pkg)

✅ [API Diff (from stable)](http://xamarin-storage/jenkins/xamarin-macios/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/jenkins-results/api-diff/index.html)
✅ [API Diff (from PR only)](http://xamarin-storage/jenkins/xamarin-macios/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/jenkins-results/apicomparison/api-diff.html) (no change)
✅ [Generator Diff](http://xamarin-storage/jenkins/xamarin-macios/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/jenkins-results/generator-diff/index.html) (no change)
🔥 [Test run failed](http://xamarin-storage/jenkins/xamarin-macios/d16-5/6dbbe6adcf1670636a56baef9398bfec54840d2a/41/jenkins-results/tests/index.html) 🔥

# Test results

<details>
<summary>1 tests failed, 177 tests passed.</summary>

## Failed tests

 * monotouch-test/watchOS 32-bits - simulator/Debug: Crashed
</details>


Zamiast umieszczać wszystkie komentarze na końcu kodu, mógłbyś dodawać je na bieżąco przy odpowiedniej linijce z kodem.


> Try now...

Thanks @andrsd. It was a test using the old syntax. I fixed it and updated the submodules.

@permcody did updating blue_crab submodules fix the other error?


With C# 8 new features you may move all these consts into `IGraphQLRequest`.


@zachmprince is right, should not have regolding. I was thinking new eigen executioner. Sorry about it.


Successfully deployed to following URLs:

* https://interface-1sjv38d13.now.sh
* https://interface.avantgarde-finance.now.sh
* https://interface-git-master.avantgarde-finance.now.sh


:+1: Thanks :)


[R/decon.R:2:3:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L2) *style:* **Trailing whitespace is superfluous.**
```r
#'
  ^
```
[R/decon.R:16:63:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L16) *style:* **Trailing whitespace is superfluous.**
```r
#' to 'L' modules, '\link[uwot]{umap}' from the 'uwot' package
                                                              ^
```
[R/decon.R:62:62:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L62) *style:* **Trailing whitespace is superfluous.**
```r
#' counts will be stored as an assay and can be accessed with
                                                             ^
```
[R/decon.R:91:18:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L91) *style:* **Trailing whitespace is superfluous.**
```r
    batch = NULL,
                 ^~~~
```
[R/decon.R:102:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L102) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/decon.R:103:42:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L103) *style:* **Put spaces around all infix operators.**
```r
  mat <- SummarizedExperiment::assay(x, i=assayName)
                                        ~^~
```
[R/decon.R:117:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L117) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/decon.R:119:14:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L119) *style:* **Use <-, not =, for assignment.**
```r
  colData(x) = cbind(colData(x),
             ^
```
[R/decon.R:127:10:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L127) *style:* **Place a space before left parenthesis, except in a function call.**
```r
      for(i in batchIndex) {
         ^
```
[R/decon.R:128:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L128) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/decon.R:132:46:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L132) *style:* **Commas should always have a space after.**
```r
        tempUMAP[result$runParams$batch == i,] <- result$estimates[[i]]$UMAP
                                             ^
```
[R/decon.R:135:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L135) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/decon.R:137:44:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L137) *style:* **Put spaces around all infix operators.**
```r
            paste("decontX", i, "UMAP", sep="_")) <- tempUMAP
                                          ~^~
```
[R/decon.R:140:42:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L140) *style:* **Commas should always have a space after.**
```r
      SingleCellExperiment::reducedDim(x,"decontX_UMAP") <-
                                         ^
```
[R/decon.R:140:60:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L140) *style:* **Trailing whitespace is superfluous.**
```r
      SingleCellExperiment::reducedDim(x,"decontX_UMAP") <-
                                                           ^
```
[R/decon.R:143:4:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L143) *style:* **Trailing whitespace is superfluous.**
```r
  }
   ^~
```
[R/decon.R:144:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L144) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/decon.R:149:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L149) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/decon.R:151:3:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L151) *style:* **Trailing whitespace is superfluous.**
```r
})
  ^
```
[R/decon.R:157:18:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L157) *style:* **Trailing whitespace is superfluous.**
```r
    batch = NULL,
                 ^~~~
```
[R/decon.R:168:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L168) *style:* **Opening curly braces should never go on their own line and should always be followed by a new line.**
```r
{
^
```
[R/decon.R:190:24:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L190) *style:* **Put spaces around all infix operators.**
```r
        assay(object, i=exprs_values, ...)
                      ~^~
```
[R/decon.R:197:24:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L197) *style:* **Put spaces around all infix operators.**
```r
        assay(object, i=exprs_values, ...) <- value
                      ~^~
```
[R/decon.R:226:18:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L226) *style:* **Trailing whitespace is superfluous.**
```r
    batch = NULL,
                 ^~~~
```
[R/decon.R:230:16:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L230) *style:* **Trailing whitespace is superfluous.**
```r
    delta = 10,
               ^~~~
```
[R/decon.R:232:14:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L232) *style:* **Trailing whitespace is superfluous.**
```r
    L = NULL,
             ^~~~
```
[R/decon.R:284:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L284) *style:* **Use spaces to indent, not tabs.**
```r
	batchIndex <- unique(batch)
^
```
[R/decon.R:285:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L285) *style:* **Use spaces to indent, not tabs.**
```r

^
```
[R/decon.R:285:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L285) *style:* **Trailing whitespace is superfluous.**
```r

^
```
[R/decon.R:286:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L286) *style:* **Use spaces to indent, not tabs.**
```r
	## Set result lists upfront for all cells from different batches
^
```
[R/decon.R:287:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L287) *style:* **Use spaces to indent, not tabs.**
```r
	logLikelihood <- c()
^
```
[R/decon.R:288:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L288) *style:* **Use spaces to indent, not tabs.**
```r
	estConp <- rep(NA, nC)
^
```
[R/decon.R:289:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L289) *style:* **Use spaces to indent, not tabs.**
```r
	returnZ <- rep(NA, nC)
^
```
[R/decon.R:293:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L293) *style:* **Use spaces to indent, not tabs.**
```r
	for (bat in batchIndex) {
^
```
[R/decon.R:295:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L295) *style:* **Use spaces to indent, not tabs.**
```r
	  if(length(batchIndex) == 1) {
^
```
[R/decon.R:295:6:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L295) *style:* **Place a space before left parenthesis, except in a function call.**
```r
	  if(length(batchIndex) == 1) {
     ^
```
[R/decon.R:297:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L297) *style:* **Use spaces to indent, not tabs.**
```r
		  date(),
^~
```
[R/decon.R:298:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L298) *style:* **Use spaces to indent, not tabs.**
```r
		  ".. Analyzing all cells",
^~
```
[R/decon.R:299:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L299) *style:* **Use spaces to indent, not tabs.**
```r
		  logfile = logfile,
^~
```
[R/decon.R:300:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L300) *style:* **Use spaces to indent, not tabs.**
```r
		  append = TRUE,
^~
```
[R/decon.R:301:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L301) *style:* **Use spaces to indent, not tabs.**
```r
		  verbose = verbose
^~
```
[R/decon.R:302:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L302) *style:* **Use spaces to indent, not tabs.**
```r
	    )
^
```
[R/decon.R:302:7:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L302) *style:* **Trailing whitespace is superfluous.**
```r
	    )
      ^~~
```
[R/decon.R:303:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L303) *style:* **Use spaces to indent, not tabs.**
```r
	  } else {
^
```
[R/decon.R:305:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L305) *style:* **Use spaces to indent, not tabs.**
```r
		  date(),
^~
```
[R/decon.R:306:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L306) *style:* **Use spaces to indent, not tabs.**
```r
		  " .. Analyzing cells in batch '",
^~
```
[R/decon.R:307:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L307) *style:* **Use spaces to indent, not tabs.**
```r
		  bat, "'",
^~
```
[R/decon.R:308:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L308) *style:* **Use spaces to indent, not tabs.**
```r
		  sep = "",
^~
```
[R/decon.R:309:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L309) *style:* **Use spaces to indent, not tabs.**
```r
		  logfile = logfile,
^~
```
[R/decon.R:310:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L310) *style:* **Use spaces to indent, not tabs.**
```r
		  append = TRUE,
^~
```
[R/decon.R:311:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L311) *style:* **Use spaces to indent, not tabs.**
```r
		  verbose = verbose
^~
```
[R/decon.R:312:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L312) *style:* **Use spaces to indent, not tabs.**
```r
	    )
^
```
[R/decon.R:313:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L313) *style:* **Use spaces to indent, not tabs.**
```r
	  }
^
```
[R/decon.R:313:5:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L313) *style:* **Trailing whitespace is superfluous.**
```r
	  }
    ^~
```
[R/decon.R:315:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L315) *style:* **Use spaces to indent, not tabs.**
```r
	  zBat <- NULL
^
```
[R/decon.R:316:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L316) *style:* **Use spaces to indent, not tabs.**
```r
	  countsBat <- counts[, batch == bat]
^
```
[R/decon.R:317:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L317) *style:* **Use spaces to indent, not tabs.**
```r

^
```
[R/decon.R:317:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L317) *style:* **Trailing whitespace is superfluous.**
```r

^~~
```
[R/decon.R:325:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L325) *style:* **Use spaces to indent, not tabs.**
```r
		    verbose = verbose
^~
```
[R/decon.R:326:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L326) *style:* **Use spaces to indent, not tabs.**
```r
	    )
^
```
[R/decon.R:330:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L330) *style:* **Use spaces to indent, not tabs.**
```r

^
```
[R/decon.R:330:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L330) *style:* **Trailing whitespace is superfluous.**
```r

^~~
```
[R/decon.R:331:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L331) *style:* **Use spaces to indent, not tabs.**
```r
	  if (!is.null(z)) {
^
```
[R/decon.R:332:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L332) *style:* **Use spaces to indent, not tabs.**
```r
		  zBat <- z[batch == bat]
^~
```
[R/decon.R:333:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L333) *style:* **Use spaces to indent, not tabs.**
```r
	  }
^
```
[R/decon.R:334:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L334) *style:* **Use spaces to indent, not tabs.**
```r
	  if (is.null(seed)) {
^
```
[R/decon.R:335:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L335) *style:* **Use spaces to indent, not tabs.**
```r
	      res <- .decontXoneBatch(
^
```
[R/decon.R:336:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L336) *style:* **Use spaces to indent, not tabs.**
```r
		      counts = countsBat,
^~
```
[R/decon.R:337:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L337) *style:* **Use spaces to indent, not tabs.**
```r
		      z = zBat,
^~
```
[R/decon.R:338:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L338) *style:* **Use spaces to indent, not tabs.**
```r
		      batch = bat,
^~
```
[R/decon.R:339:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L339) *style:* **Use spaces to indent, not tabs.**
```r
		      maxIter = maxIter,
^~
```
[R/decon.R:340:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L340) *style:* **Use spaces to indent, not tabs.**
```r
		      delta = delta,
^~
```
[R/decon.R:341:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L341) *style:* **Use spaces to indent, not tabs.**
```r
		      convergence = convergence,
^~
```
[R/decon.R:342:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L342) *style:* **Use spaces to indent, not tabs.**
```r
		      iterLogLik = iterLogLik,
^~
```
[R/decon.R:343:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L343) *style:* **Use spaces to indent, not tabs.**
```r
		      logfile = logfile,
^~
```
[R/decon.R:344:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L344) *style:* **Use spaces to indent, not tabs.**
```r
		      verbose = verbose,
^~
```
[R/decon.R:345:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L345) *style:* **Use spaces to indent, not tabs.**
```r
		      varGenes = varGenes,
^~
```
[R/decon.R:346:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L346) *style:* **Use spaces to indent, not tabs.**
```r
		      dbscanEps = dbscanEps,
^~
```
[R/decon.R:347:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L347) *style:* **Use spaces to indent, not tabs.**
```r
		      L = L)
^~
```
[R/decon.R:347:15:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L347) *style:* **Trailing whitespace is superfluous.**
```r
		      L = L)
              ^~~
```
[R/decon.R:348:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L348) *style:* **Use spaces to indent, not tabs.**
```r
	  } else {
^
```
[R/decon.R:349:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L349) *style:* **Use spaces to indent, not tabs.**
```r
	    withr::with_seed(seed,
^
```
[R/decon.R:350:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L350) *style:* **Use spaces to indent, not tabs.**
```r
	      res <- .decontXoneBatch(
^
```
[R/decon.R:351:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L351) *style:* **Use spaces to indent, not tabs.**
```r
		      counts = countsBat,
^~
```
[R/decon.R:352:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L352) *style:* **Use spaces to indent, not tabs.**
```r
		      z = zBat,
^~
```
[R/decon.R:353:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L353) *style:* **Use spaces to indent, not tabs.**
```r
		      batch = bat,
^~
```
[R/decon.R:354:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L354) *style:* **Use spaces to indent, not tabs.**
```r
		      maxIter = maxIter,
^~
```
[R/decon.R:355:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L355) *style:* **Use spaces to indent, not tabs.**
```r
		      delta = delta,
^~
```
[R/decon.R:356:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L356) *style:* **Use spaces to indent, not tabs.**
```r
		      convergence = convergence,
^~
```
[R/decon.R:357:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L357) *style:* **Use spaces to indent, not tabs.**
```r
		      iterLogLik = iterLogLik,
^~
```
[R/decon.R:358:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L358) *style:* **Use spaces to indent, not tabs.**
```r
		      logfile = logfile,
^~
```
[R/decon.R:359:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L359) *style:* **Use spaces to indent, not tabs.**
```r
		      verbose = verbose,
^~
```
[R/decon.R:360:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L360) *style:* **Use spaces to indent, not tabs.**
```r
		      varGenes = varGenes,
^~
```
[R/decon.R:361:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L361) *style:* **Use spaces to indent, not tabs.**
```r
		      dbscanEps = dbscanEps,
^~
```
[R/decon.R:362:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L362) *style:* **Use spaces to indent, not tabs.**
```r
		      L = L)
^~
```
[R/decon.R:363:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L363) *style:* **Use spaces to indent, not tabs.**
```r
	      )
^
```
[R/decon.R:365:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L365) *style:* **Use spaces to indent, not tabs.**
```r
	  estRmat <- calculateNativeMatrix(
^
```
[R/decon.R:366:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L366) *style:* **Use spaces to indent, not tabs.**
```r
		  counts = countsBat,
^~
```
[R/decon.R:367:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L367) *style:* **Use spaces to indent, not tabs.**
```r
		  native_counts = estRmat,
^~
```
[R/decon.R:368:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L368) *style:* **Use spaces to indent, not tabs.**
```r
		  theta = res$theta,
^~
```
[R/decon.R:369:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L369) *style:* **Use spaces to indent, not tabs.**
```r
		  eta = res$eta,
^~
```
[R/decon.R:370:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L370) *style:* **Use spaces to indent, not tabs.**
```r
		  row_index = seq(nrow(counts)),
^~
```
[R/decon.R:371:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L371) *style:* **Use spaces to indent, not tabs.**
```r
		  col_index = which(batch == bat),
^~
```
[R/decon.R:372:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L372) *style:* **Use spaces to indent, not tabs.**
```r
		  phi = res$phi,
^~
```
[R/decon.R:373:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L373) *style:* **Use spaces to indent, not tabs.**
```r
		  z = as.integer(res$z),
^~
```
[R/decon.R:374:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L374) *style:* **Use spaces to indent, not tabs.**
```r
		  pseudocount = 1e-20
^~
```
[R/decon.R:375:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L375) *style:* **Use spaces to indent, not tabs.**
```r
	  )
^
```
[R/decon.R:377:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L377) *style:* **Use spaces to indent, not tabs.**
```r
	  resBatch[[bat]] <- list(
^
```
[R/decon.R:378:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L378) *style:* **Use spaces to indent, not tabs.**
```r
	      z = res$z,
^
```
[R/decon.R:379:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L379) *style:* **Use spaces to indent, not tabs.**
```r
		  phi = res$phi,
^~
```
[R/decon.R:380:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L380) *style:* **Use spaces to indent, not tabs.**
```r
		  eta = res$eta,
^~
```
[R/decon.R:381:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L381) *style:* **Use spaces to indent, not tabs.**
```r
		  delta = res$delta,
^~
```
[R/decon.R:382:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L382) *style:* **Use spaces to indent, not tabs.**
```r
		  theta = res$theta,
^~
```
[R/decon.R:383:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L383) *style:* **Use spaces to indent, not tabs.**
```r
		  logLikelihood = res$logLikelihood,
^~
```
[R/decon.R:384:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L384) *style:* **Use spaces to indent, not tabs.**
```r
		  UMAP = res$UMAP,
^~
```
[R/decon.R:385:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L385) *style:* **Use spaces to indent, not tabs.**
```r
		  z = res$z,
^~
```
[R/decon.R:386:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L386) *style:* **Use spaces to indent, not tabs.**
```r
		  iteration = res$iteration
^~
```
[R/decon.R:387:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L387) *style:* **Use spaces to indent, not tabs.**
```r
	  )
^
```
[R/decon.R:388:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L388) *style:* **Use spaces to indent, not tabs.**
```r

^
```
[R/decon.R:388:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L388) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/decon.R:389:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L389) *style:* **Use spaces to indent, not tabs.**
```r
	  estConp[batch == bat] <- res$contamination
^
```
[R/decon.R:390:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L390) *style:* **Use spaces to indent, not tabs.**
```r
	  if(length(batchIndex) > 1) {
^
```
[R/decon.R:390:6:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L390) *style:* **Place a space before left parenthesis, except in a function call.**
```r
	  if(length(batchIndex) > 1) {
     ^
```
[R/decon.R:391:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L391) *style:* **Use spaces to indent, not tabs.**
```r
	    returnZ[batch == bat] <- paste0(bat, "-", res$z)
^
```
[R/decon.R:392:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L392) *style:* **Use spaces to indent, not tabs.**
```r
	  } else {
^
```
[R/decon.R:393:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L393) *style:* **Use spaces to indent, not tabs.**
```r
	    returnZ[batch == bat] <- res$z
^
```
[R/decon.R:394:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L394) *style:* **Use spaces to indent, not tabs.**
```r
	  }
^
```
[R/decon.R:394:5:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L394) *style:* **Trailing whitespace is superfluous.**
```r
	  }
    ^~
```
[R/decon.R:402:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L402) *style:* **Use spaces to indent, not tabs.**
```r
	}
^
```
[R/decon.R:404:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L404) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/decon.R:406:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L406) *style:* **Use spaces to indent, not tabs.**
```r
	## All batches share the same other parameters except cluster label z
^
```
[R/decon.R:407:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L407) *style:* **Use spaces to indent, not tabs.**
```r
	## So update z in the final returned result
^
```
[R/decon.R:410:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L410) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/decon.R:411:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L411) *style:* **Use spaces to indent, not tabs.**
```r
	returnResult <- list(
^
```
[R/decon.R:412:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L412) *style:* **Use spaces to indent, not tabs.**
```r
		"runParams" = runParams,
^~
```
[R/decon.R:413:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L413) *style:* **Use spaces to indent, not tabs.**
```r
		"estimates" = resBatch,
^~
```
[R/decon.R:414:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L414) *style:* **Use spaces to indent, not tabs.**
```r
		"decontXcounts" = estRmat,
^~
```
[R/decon.R:415:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L415) *style:* **Use spaces to indent, not tabs.**
```r
		"contamination" = estConp,
^~
```
[R/decon.R:416:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L416) *style:* **Use spaces to indent, not tabs.**
```r
		"z" = returnZ
^~
```
[R/decon.R:417:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L417) *style:* **Use spaces to indent, not tabs.**
```r
	)
^
```
[R/decon.R:423:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L423) *style:* **Use spaces to indent, not tabs.**
```r
	      ".. Finalizing decontaminated matrix",
^
```
[R/decon.R:424:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L424) *style:* **Use spaces to indent, not tabs.**
```r
		  logfile = logfile,
^~
```
[R/decon.R:425:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L425) *style:* **Use spaces to indent, not tabs.**
```r
		  append = TRUE,
^~
```
[R/decon.R:426:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L426) *style:* **Use spaces to indent, not tabs.**
```r
		  verbose = verbose
^~
```
[R/decon.R:427:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L427) *style:* **Use spaces to indent, not tabs.**
```r
	  )
^
```
[R/decon.R:428:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L428) *style:* **Use spaces to indent, not tabs.**
```r
	}
^
```
[R/decon.R:428:3:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L428) *style:* **Trailing whitespace is superfluous.**
```r
	}
  ^~~~~
```
[R/decon.R:429:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L429) *style:* **Trailing whitespace is superfluous.**
```r

^~~~
```
[R/decon.R:435:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L435) *style:* **Lines should not be more than 80 characters.**
```r
        returnResult$decontXcounts <- as(returnResult$decontXcounts, "HDF5Matrix")
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/decon.R:438:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L438) *style:* **Lines should not be more than 80 characters.**
```r
          returnResult$decontXcounts <- as(returnResult$decontXcounts, seed.class)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/decon.R:439:10:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L439) *style:* **Trailing whitespace is superfluous.**
```r
        }
         ^~~~
```
[R/decon.R:442:65:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L442) *style:* **Trailing whitespace is superfluous.**
```r
          DelayedArray::DelayedArray(returnResult$decontXcounts)
                                                                ^~~
```
[R/decon.R:445:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L445) *style:* **Trailing whitespace is superfluous.**
```r

^~
```
[R/decon.R:446:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L446) *style:* **Lines should not be more than 80 characters.**
```r
      #returnResult$decontXcounts <- as(returnResult$decontXcounts, class(counts))
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/decon.R:447:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L447) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~
```
[R/decon.R:448:7:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L448) *style:* **Trailing whitespace is superfluous.**
```r
    #}
      ^
```
[R/decon.R:475:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L475) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~~~
```
[R/decon.R:571:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L571) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~
```
[R/decon.R:649:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L649) *style:* **Use spaces to indent, not tabs.**
```r
			theta.previous <- theta
^~~
```
[R/decon.R:654:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L654) *style:* **Use spaces to indent, not tabs.**
```r
			  llTemp <- decontXLogLik(
^~~
```
[R/decon.R:655:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L655) *style:* **Use spaces to indent, not tabs.**
```r
				  counts = counts,
^~~~
```
[R/decon.R:656:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L656) *style:* **Use spaces to indent, not tabs.**
```r
				  z = z,
^~~~
```
[R/decon.R:657:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L657) *style:* **Use spaces to indent, not tabs.**
```r
				  phi = phi,
^~~~
```
[R/decon.R:658:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L658) *style:* **Use spaces to indent, not tabs.**
```r
				  eta = eta,
^~~~
```
[R/decon.R:659:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L659) *style:* **Use spaces to indent, not tabs.**
```r
				  theta = theta,
^~~~
```
[R/decon.R:660:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L660) *style:* **Use spaces to indent, not tabs.**
```r
				  pseudocount = 1e-20)
^~~~
```
[R/decon.R:662:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L662) *style:* **Use spaces to indent, not tabs.**
```r
			  ll <- c(ll, llTemp)
^~~
```
[R/decon.R:670:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L670) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~~~~~
```
[R/decon.R:680:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L680) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~~~~~
```
[R/decon.R:682:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L682) *style:* **Trailing whitespace is superfluous.**
```r

^~~~~~~~~~~~
```
[R/decon.R:946:73:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L946) *style:* **Trailing whitespace is superfluous.**
```r
            initialL = L, maxL = L, perplexity = FALSE, verbose = FALSE)
                                                                        ^~~~~~~~
```
[R/decon.R:973:59:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L973) *style:* **Trailing whitespace is superfluous.**
```r
        resUmap <- celdaUmap(countsFiltered, initialModel,
                                                          ^
```
[R/decon.R:1168:1:](https://github.com/joshua-d-campbell/celda/blob/885a9d6875926f1806156ae39b0f3629736b74f2/R/decon.R#L1168) *style:* **Trailing blank lines are superfluous.**
```r

^
```


Successfully deployed to following URLs:

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updateManifiestYear (mitchute) - x86_64-Linux-Ubuntu-18.04-cppcheck: OK (0 of 0 tests passed, 0 test warnings)

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You are pushing commits at a very fast pace (across the whole organization).
Due to that, we cannot deploy the commit 163ab53d9cfd4f6dd594fb6d5b80f825c21d9c85.

You can try again later or [upgrade](https://zeit.co/account/plan) your plan.


You are pushing commits at a very fast pace (across the whole organization).
Due to that, we cannot deploy the commit abd38d34cdef471e2df6d51a4decd561b3aa0c18.

You can try again later or [upgrade](https://zeit.co/account/plan) your plan.


Copy of this build can be found at
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updateManifiestYear (mitchute) - x86_64-Linux-Ubuntu-18.04-custom_check: OK (11 of 11 tests passed, 0 test warnings)

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格式化代码


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Deployment failed with the following error:

~~~
Couldn't parse JSON file /tmp/5CHtypef3DM2tgzD8Z23KBca/repo/now.json.
~~~


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Should this not be inside the try block?


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TeamCity Bvcms / Build [Build 3337](https://builds.tpsdb.com/viewLog.html?buildId=11128&buildTypeId=Bvcms_Build) is now running


should we still spin here after the first yield?


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Why is it necessary to await the timeoutTask? If it has been cancelled it should dispose and clean up after itself. What are we gaining by awaiting it?


This wasn't listed as a breaking change on the releases page


@JuliaRegistrator register()


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Registration pull request created: [JuliaRegistries/General/7612](https://github.com/JuliaRegistries/General/pull/7612)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.7.1 -m "<description of version>" 7abd82da24693b9cace03b8bb2cb5e57d4c52ac5
git push origin v0.7.1
```


Niiice


Correct - that is because of a typo I made in the commit.


you could replace this if/else by just

`return @str[previous_char_index] == @str[previous_char_index].downcase`

return being optional.


crystalism says to write `def camel_case_letter?(...` instead, anyway, it's your project, you say the rules :-)


Die intake_hours müssen zur in diesem Format zur verfügung gestellt werden, um offene unterküfte auf der Karte anzeigen zu können.


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@gsmet le order is supposed to be respected. If the order is wrong it could break folders creations and probably means something is wrong somewhere.


Happy new year.
Great, this is the first step into a big advantage: hash mode 22000 PMKID+EAPOL used by hashcat and JtR

Cheers
Mike


yes, it's can work on javascript new Date library will be auto-convert it if the beginning of the string is 0 but I am not sure if is not javascript
I will update it, thanks.


[R/ABC_SMC.R:11:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
# @param    current                 vector       Current parameter combination for which we are determining the weight
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:12:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                   scalar       standard deviation of the perturbation
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:13:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L13) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function  function     Function to calculate the prior probability of a set of parameters
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:36:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
# @brief apply the ABC routine used in our Methods in Ecology and Evolution Paper
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:43:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
# @param    statistics                    vector      A vector containing functions that take a tree as an argument and return a single scalar value (the statistic).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:44:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
# @param    simulation_function           vector      A function that implements the diversification model and returns an object of class phylo
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:45:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
# @param    init_epsilon_values           vector      A vector containing the initial threshold values for the summary statistics from the vector statistics.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:46:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_generating_function     function    Function to generate parameters from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:47:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function        function    Function to calculate the prior probability of a set of parameters (should match prior_generating_function in shape)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:48:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
# @param    number_of_particles           scalar      Number of particles to be used per iteration of the ABC-SMC algorithm.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:49:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                         scalar      Standard deviation of the perturbance distribution (perturbance distribution is a gaussian with mean 0).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:50:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
# @param    stop_rate                     scalar      If the acceptance rate drops below \code{stopRate}, stop the ABC-SMC algorithm  and assume convergence.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:51:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
# @return                                 matrix      A matrix with n columns, where n is the number of parameters you are trying to estimate.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:75:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L75) *style:* **Lines should not be more than 80 characters.**
```r
#'   from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:126:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L126) *style:* **functions should have cyclomatic complexity of less than 15, this has 42.**
```r
abc_smc_nltt <- function(tree,
^
```
[R/ABC_SMC.R:276:13:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L276) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( (number_accepted / tried) < stop_rate) {
            ^
```
[R/ABC_SMC.R:301:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L301) *style:* **Lines should not be more than 80 characters.**
```r
# @brief Estimate the likelihood of a given tree, provided a likelihood function, using a Monte Carlo Markov Chain
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:308:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L308) *style:* **Lines should not be more than 80 characters.**
```r
# @param    likelihood_function   function    Function that calculates the likelihood of our diversification model, given the tree.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:309:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L309) *style:* **Lines should not be more than 80 characters.**
```r
#                                             function should be of the format function(parameters, phy).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:310:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L310) *style:* **Lines should not be more than 80 characters.**
```r
# @param    parameters            vector      Initial parameters to start the chain.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:311:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L311) *style:* **Lines should not be more than 80 characters.**
```r
# @param    logtransforms         scalar      Whether to perform jumps on logtransformed parameters (TRUE) or not (FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:313:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L313) *style:* **Lines should not be more than 80 characters.**
```r
# @param    burnin                scalar      Length of the burnin, default is 30% of iterations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:315:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L315) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                 scalar      Standard deviation of the jumping distribution, which is N(0, sigma).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:316:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L316) *style:* **Lines should not be more than 80 characters.**
```r
# @return                         mcmc        An MCMC object, as used by the package "coda".
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:320:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/ABC_SMC.R#L320) *style:* **functions should have cyclomatic complexity of less than 15, this has 34.**
```r
mcmc_nltt <- function(phy, likelihood_function,
^
```
[R/get_average_nltt_matrix.R:14:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/get_average_nltt_matrix.R#L14) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
get_average_nltt_matrix <- function(
^
```
[R/get_n_lineages.R:17:12:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/get_n_lineages.R#L17) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
    return(1:length(phylogeny$tip.label))
           ^
```
[R/nLTTDiff.R:59:27:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L59) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "since"){
                          ^~
```
[R/nLTTDiff.R:66:25:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L66) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "ago"){
                        ^~
```
[R/nLTTDiff.R:186:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
#' Calculates the exact difference between the lineage through time curves of tree1 & tree2 (normalized in time and for the number of lineages)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:274:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L274) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:275:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L275) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:283:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L283) *style:* **Lines should not be more than 80 characters.**
```r
#' @usage nLTTstat(tree1, tree2, distance_method = "abs", ignore_stem = TRUE, log_transform = FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:344:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L344) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:345:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L345) *style:* **Lines should not be more than 80 characters.**
```r
# @param    ignore_stem            logical    Should the phylogeny its stem be ignored?
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:346:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nLTTDiff.R#L346) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltts_plot.R:19:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/nltts_plot.R#L19) *style:* **functions should have cyclomatic complexity of less than 15, this has 17.**
```r
nltts_plot <- function(
^
```
[R/plot_nLTT.R:36:23:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/plot_nLTT.R#L36) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
nltt_plot <- function( phy, xlab = "Normalized Time",
                      ^
```
[R/plot_nLTT.R:51:28:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                           ^
```
[R/plot_nLTT.R:51:33:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                                ^
```
[R/plot_nLTT.R:52:28:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/plot_nLTT.R#L52) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] / max( xy[, 1])      #normalize time
                           ^
```
[R/plot_nLTT.R:94:32:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/plot_nLTT.R#L94) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs(min( xy[, 1])) #make sure time runs from 0..T
                               ^
```
[R/stretch_nltt_matrix.R:22:1:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/R/stretch_nltt_matrix.R#L22) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
stretch_nltt_matrix <- function(
^
```
[tests/testthat/test-abc_smc_nltt.R:30:5:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-abc_smc_nltt.R#L30) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-abc_smc_nltt.R:35:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-abc_smc_nltt.R#L35) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-abc_smc_nltt.R:49:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-abc_smc_nltt.R#L49) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- stats::optimize(f = tofit, interval = c(0, 1))
  ^~
```
[tests/testthat/test-abc_smc_nltt.R:55:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-abc_smc_nltt.R#L55) *style:* **Variable and function name style should be snake_case.**
```r
  A <- abc_smc_nltt(
  ^
```
[tests/testthat/test-get_average_nltt.R:10:5:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-get_average_nltt.R#L10) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-get_average_nltt.R:41:5:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-get_average_nltt.R#L41) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mcmc_nltt.R:14:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-mcmc_nltt.R#L14) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-mcmc_nltt.R:31:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-mcmc_nltt.R#L31) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- optim(par = c(1, 0.001), fn = tofit)
  ^~
```
[tests/testthat/test-mcmc_nltt.R:58:3:](https://github.com/richelbilderbeek/nLTT/blob/91d3c4cd8940c792d058ad749b70e98fe9f094cd/tests/testthat/test-mcmc_nltt.R#L58) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```


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~~~
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~~~

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`ch_core.hookenv.env_proxy_settings()` can return None which will cause a Traceback with this code.


Fixed - https://github.com/Slicer/Slicer/commit/5656b7ec719045545a5358e720172f23094d5d27


Solving the crash in the HFSS , saving the REsults Hamiltonian object as an npz file and enabling some of the exsiting functions which required the entire variation list to deal only with partial variation list


You don't use this function.


The c-h implementation refers to Juju 2.4.2 as inital version of support.


@the-j0k3r I wasn't a fan of seeing emojis in the build output, as fun as they are to use I just found them distracting here


remove_objexx_gio (lefticus) - x86_64-Linux-Ubuntu-18.04-cppcheck: OK (0 of 0 tests passed, 0 test warnings)

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Deploy preview for _website_ ready!

Built with commit undefined

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`@JuliaRegistrator register`


Awesome work


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Remove null


cest


Why was this code changed?

There is absolutely added value in the return statements being present.  They overtly document that these method are used to return values to the calling functions.  Removing this documentation is unlikely to actually change the code being generated but could lead to a reduced understanding on what is going on.

Unless you have a better reason for removing these lines please revert this change.


@jimregan Could you rebase your changes (when working with PRs, the button is called "Rebase and merge")? That will avoid merge commits like these, which are not very useful and just fill up then history.


这不是bug，是我故意在前台去掉的，因为用户发贴还要填标签比较麻烦，且填的还乱，所以标签这个功能放在后台让站长维护，可以看到你“修复”添加上的代码，我都有注释掉 😂


trytry


@jesusvilla good point


Yeah, good catch!


@AbdullahZN Sorry to ping, but could we please build again.


Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `scripts` property.
~~~


Beta version


Membii trebuie encapsulati cu identificatorul private.


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updateManifiestYear (mitchute) - Win64-Windows-10-VisualStudio-16: OK (2596 of 2596 tests passed, 0 test warnings)

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RFC 2119 ArrayBuffer(59)

--00000000000016e2e2059b7996a8
Content-Type: text/html; charset="UTF-8"
Content-Transfer-Encoding: quoted-printable

RFC 2119=C2=A0Ar=
rayBuffer(59<s=
pan style=3D"font-family:consolas,monaco,"andale mono","ubun=
tu mono",monospace;font-size:12px;background-color:rgb(43,43,43);color=
:rgb(254,254,254)">)

--00000000000016e2e2059b7996a8--


This is to create a user profile, show profile and edit profile by pop up, create menu on home to navigate to other activity


Port to mobile 1.3.0.7


I see. You are missing the library I think. You need to download the circuitpython bundle of libraries and copy the display ones into the lib folder on your circuit python board.


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adicionado uma exlamação (!) no final da linha


[core] fix(NumericInput): correct rounding of default value (#3894)

Previews: documentation | landing | table


Thanks, feel free to file an issue so that we can take look. For the test part, I grabbed from the previous PR (with only updating `settings.virtualenvs.in-project` to `virtualenvs.in-project`)


initial code


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Registration pull request created: [JuliaRegistries/General/7655](https://github.com/JuliaRegistries/General/pull/7655)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.2.0 -m "<description of version>" a8eaaad932a588c1bfd738db19b3e27243d95e2f
git push origin v0.2.0
```