[R/ABC_SMC.R:11:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
# @param    current                 vector       Current parameter combination for which we are determining the weight
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:12:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                   scalar       standard deviation of the perturbation
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:13:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L13) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function  function     Function to calculate the prior probability of a set of parameters
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:36:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
# @brief apply the ABC routine used in our Methods in Ecology and Evolution Paper
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:43:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
# @param    statistics                    vector      A vector containing functions that take a tree as an argument and return a single scalar value (the statistic).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:44:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
# @param    simulation_function           vector      A function that implements the diversification model and returns an object of class phylo
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:45:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
# @param    init_epsilon_values           vector      A vector containing the initial threshold values for the summary statistics from the vector statistics.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:46:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_generating_function     function    Function to generate parameters from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:47:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function        function    Function to calculate the prior probability of a set of parameters (should match prior_generating_function in shape)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:48:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
# @param    number_of_particles           scalar      Number of particles to be used per iteration of the ABC-SMC algorithm.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:49:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                         scalar      Standard deviation of the perturbance distribution (perturbance distribution is a gaussian with mean 0).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:50:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
# @param    stop_rate                     scalar      If the acceptance rate drops below \code{stopRate}, stop the ABC-SMC algorithm  and assume convergence.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:51:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
# @return                                 matrix      A matrix with n columns, where n is the number of parameters you are trying to estimate.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:75:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L75) *style:* **Lines should not be more than 80 characters.**
```r
#'   from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:126:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L126) *style:* **functions should have cyclomatic complexity of less than 15, this has 42.**
```r
abc_smc_nltt <- function(tree,
^
```
[R/ABC_SMC.R:276:13:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L276) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( (number_accepted / tried) < stop_rate) {
            ^
```
[R/ABC_SMC.R:301:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L301) *style:* **Lines should not be more than 80 characters.**
```r
# @brief Estimate the likelihood of a given tree, provided a likelihood function, using a Monte Carlo Markov Chain
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:308:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L308) *style:* **Lines should not be more than 80 characters.**
```r
# @param    likelihood_function   function    Function that calculates the likelihood of our diversification model, given the tree.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:309:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L309) *style:* **Lines should not be more than 80 characters.**
```r
#                                             function should be of the format function(parameters, phy).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:310:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L310) *style:* **Lines should not be more than 80 characters.**
```r
# @param    parameters            vector      Initial parameters to start the chain.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:311:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L311) *style:* **Lines should not be more than 80 characters.**
```r
# @param    logtransforms         scalar      Whether to perform jumps on logtransformed parameters (TRUE) or not (FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:313:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L313) *style:* **Lines should not be more than 80 characters.**
```r
# @param    burnin                scalar      Length of the burnin, default is 30% of iterations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:315:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L315) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                 scalar      Standard deviation of the jumping distribution, which is N(0, sigma).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:316:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L316) *style:* **Lines should not be more than 80 characters.**
```r
# @return                         mcmc        An MCMC object, as used by the package "coda".
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:320:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L320) *style:* **functions should have cyclomatic complexity of less than 15, this has 34.**
```r
mcmc_nltt <- function(phy, likelihood_function,
^
```
[R/get_average_nltt_matrix.R:14:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_average_nltt_matrix.R#L14) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
get_average_nltt_matrix <- function(
^
```
[R/get_n_lineages.R:17:12:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_n_lineages.R#L17) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
    return(1:length(phylogeny$tip.label))
           ^
```
[R/get_norm_brts.R:22:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_norm_brts.R#L22) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:27:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L27) *style:* **functions should have cyclomatic complexity of less than 15, this has 23.**
```r
nltt_diff_exact_extinct <- function(
^
```
[R/nltt_diff_exact_extinct.R:50:27:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L50) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "since"){
                          ^~
```
[R/nltt_diff_exact_extinct.R:57:25:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L57) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "ago"){
                        ^~
```
[R/nltt_diff_exact_extinct.R:82:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    species_number_n <- species_number / max(species_number)  #normalize lineages
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:87:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    event_times2_n <- 1 - event_times2 / min(event_times2) #normalize branching times
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:88:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    species_number2_n <- species_number2 / max(species_number2)  #normalize lineages
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:136:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L136) *style:* **Commented code should be removed.**
```r
  # testit::assert(event_times[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:137:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L137) *style:* **Commented code should be removed.**
```r
  # testit::assert(species_number[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:138:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L138) *style:* **Commented code should be removed.**
```r
  # testit::assert(event_times2[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:139:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L139) *style:* **Commented code should be removed.**
```r
  # testit::assert(species_number[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:141:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L141) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(event_times >= 0.0 & event_times <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:142:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L142) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(species_number >= 0.0 & species_number <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:143:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L143) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(event_times2 >= 0.0 & event_times2 <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:144:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L144) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(species_number >= 0.0 & species_number <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:183:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L183) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:184:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L184) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:185:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L185) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nLTTDiff.R:59:27:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L59) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "since"){
                          ^~
```
[R/nLTTDiff.R:66:25:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L66) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "ago"){
                        ^~
```
[R/nLTTDiff.R:186:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
#' Calculates the exact difference between the lineage through time curves of tree1 & tree2 (normalized in time and for the number of lineages)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:274:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L274) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:275:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L275) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:283:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L283) *style:* **Lines should not be more than 80 characters.**
```r
#' @usage nLTTstat(tree1, tree2, distance_method = "abs", ignore_stem = TRUE, log_transform = FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:344:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L344) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:345:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L345) *style:* **Lines should not be more than 80 characters.**
```r
# @param    ignore_stem            logical    Should the phylogeny its stem be ignored?
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:346:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L346) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltts_plot.R:19:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltts_plot.R#L19) *style:* **functions should have cyclomatic complexity of less than 15, this has 17.**
```r
nltts_plot <- function(
^
```
[R/plot_nLTT.R:36:23:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L36) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
nltt_plot <- function( phy, xlab = "Normalized Time",
                      ^
```
[R/plot_nLTT.R:51:28:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                           ^
```
[R/plot_nLTT.R:51:33:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                                ^
```
[R/plot_nLTT.R:52:28:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L52) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] / max( xy[, 1])      #normalize time
                           ^
```
[R/plot_nLTT.R:94:32:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L94) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs(min( xy[, 1])) #make sure time runs from 0..T
                               ^
```
[R/stretch_nltt_matrix.R:22:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/stretch_nltt_matrix.R#L22) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
stretch_nltt_matrix <- function(
^
```
[tests/testthat/test-abc_smc_nltt.R:30:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L30) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-abc_smc_nltt.R:35:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L35) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-abc_smc_nltt.R:49:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L49) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- stats::optimize(f = tofit, interval = c(0, 1))
  ^~
```
[tests/testthat/test-abc_smc_nltt.R:55:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L55) *style:* **Variable and function name style should be snake_case.**
```r
  A <- abc_smc_nltt(
  ^
```
[tests/testthat/test-get_average_nltt.R:10:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-get_average_nltt.R#L10) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-get_average_nltt.R:41:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-get_average_nltt.R#L41) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mcmc_nltt.R:14:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L14) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-mcmc_nltt.R:31:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L31) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- optim(par = c(1, 0.001), fn = tofit)
  ^~
```
[tests/testthat/test-mcmc_nltt.R:58:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L58) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-nltt_diff_exact_brts.R:40:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_brts.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    regexp = "branching times must be negative, for example -3 time units since the present"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-nltt_diff_exact_brts.R:54:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_brts.R#L54) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:29:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L29) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages1 <- 1:length(event_times)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:30:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L30) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages2 <- 1:length(event_times2)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:77:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L77) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages1 <- 1:length(event_times)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:78:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L78) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages2 <- 1:length(event_times2)
               ^
```


list_item.xml

<?xml version="1.0" encoding="utf-8"?>
<LinearLayout
    xmlns:android="http://schemas.android.com/apk/res/android"
    xmlns:tools="http://schemas.android.com/tools"
    android:layout_width="match_parent"
    android:layout_height="wrap_content"
    android:background="@color/tan_background"
    android:minHeight="@dimen/list_item_height"
    android:orientation="horizontal">

    <ImageView
        android:id="@+id/image"
        android:layout_width="@dimen/list_item_height"
        android:layout_height="@dimen/list_item_height" />

    <RelativeLayout
        android:layout_width="match_parent"
        android:layout_height="match_parent">

      <LinearLayout
        android:id="@+id/text_container"
        android:layout_width="match_parent"
        android:layout_height="match_parent"
        android:background="@color/category_numbers"
        android:orientation="vertical"
        android:paddingLeft="16dp">

        <TextView
            android:id="@+id/miwok_text_view"
            android:layout_width="match_parent"
            android:layout_height="0dp"
            android:layout_weight="1"
            android:gravity="bottom"
            android:textAppearance="?android:textAppearanceMedium"
            android:textColor="@android:color/white"
            android:textStyle="bold"
            tools:text="lutti" />

        <TextView
            android:id="@+id/default_text_view"
            android:layout_width="match_parent"
            android:layout_height="0dp"
            android:layout_weight="1"
            android:gravity="top"
            android:textAppearance="?android:textAppearanceMedium"
            android:textColor="@android:color/white"
            tools:text="one" />
      </LinearLayout>

      <ImageView
      android:layout_width="24dp"
      android:layout_height="24dp"
      android:layout_alignParentRight="true"
      android:layout_centerVertical="true"
      android:layout_marginRight="16dp"
      android:src="@drawable/ic_play_arrow_black_24dp" />

    </RelativeLayout>
</LinearLayout>


Registration pull request created: [JuliaRegistries/General/7841](https://github.com/JuliaRegistries/General/pull/7841)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.3.1 -m "<description of version>" 60002d2c429cdbd7014abc2dc6330dba1c1dbd5f
git push origin v0.3.1
```


... and this is what they look like:

![grafik](https://user-images.githubusercontent.com/704283/72237369-7cbb1700-35da-11ea-9849-829955f9669e.png)


looks good


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***Error in commit message: data binding for the home fragment is not included in this update.


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Yes, but I don't like to just cut on fields and not validate the input... with the sed call we know exactly that we'll be getting a number with at least one digit.


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使用192.168.139.1导致用户一运行就会报错


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@JuliaRegistrator register


You didnt put "New News" listing in this. Can you add it here?


Registration pull request created: [JuliaRegistries/General/7884](https://github.com/JuliaRegistries/General/pull/7884)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.3.0 -m "<description of version>" 85027b41522b1ae4d3cf059ff7cc8beaa7c22c9f
git push origin v0.3.0
```


Okay, I can do that!


@mstembera I agree, that seems to be what happened: the bench and branch name match a failed-red STC, not a green one.  Setting priority to -1 for now while we seek clarification from @Vizvezdenec.


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hvacVRFRefactor (mitchute) - x86_64-Linux-Ubuntu-18.04-gcc-7.4-UnitTestsCoverage-Debug: OK (1258 of 1258 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-100.0%25-green.png) ![Coverage Badge](http://img.shields.io/badge/coverage%20status-43.56%25-green.png)


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Dont delete this line


added comment to test pulling from fork


Yea we went over the pros and cons of doing this or limiting numTicks and decided this was preferable


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IBM Cloud [toolchain](https://cloud.ibm.com/devops/toolchains/b483d91f-e9d9-4c0d-95f0-0896fcb83d80?env_id=ibm%3Ayp%3Aus-south "odr-mean-demo"): [Delivery Pipeline](https://cloud.ibm.com/devops/pipelines/38efe4b5-0a8e-4cb7-b16f-020ab5682386 "odr-mean-demo") deployed [meanDevOps](https://github.com/odrodrig/meanDevOps/releases/tag/deploy-ibm-yp-us-south-odrodrig-us.ibm.com-dev-20200114-235201 "deploy-ibm-yp-us-south-odrodrig-us.ibm.com-dev-20200114-235201") to [dev](https://console.bluemix.net/apps/618ff94c-d0a4-47c4-ac97-fabd75ccb676?env_id=ibm:yp:us-south "ibm:yp:us-south:odrodrig@us.ibm.com:dev"), including this commit


TeamCity Bvcms / Build [Build 3402](https://builds.tpsdb.com/viewLog.html?buildId=11329&buildTypeId=Bvcms_Build) outcome was **SUCCESS**
Summary: Tests passed: 224 Build time: 00:27:19


TeamCity Bvcms / Build [Build 3403](https://builds.tpsdb.com/viewLog.html?buildId=11330&buildTypeId=Bvcms_Build) is now running


Copy of this build can be found at
https://www.mewbuilds.com/build/143b27516b86de7a5cb44932659b7b917c8e4ec2/index.html
                       https://www.cloudflare-ipfs.com/ipfs/QmUeDS5pCVyPf996iqxxrU8j6omZwu2HS5Eqcnk2yH8fwV
                       Virus Total analysis
                       https://www.virustotal.com/file/bb1691817cf4c87a0edc822aab01183f048dc2f17b1598448f43055aa8d37883/analysis/1579046009/


string lits actually do have OnDelim positions, because there are the open and close `"` markers


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You could do this as a generate reduce pattern.
something like
```rust
(0..100).cartesian_product(0..100).find(|(n,v)| eval(n,v) == 19690720).unwrap()
```

See https://docs.rs/itertools/0.8.2/itertools/trait.Itertools.html#method.cartesian_product
for `cartesian_product` (and it's worth reading through all the functions in that crate, they're very useful)


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Wouldn't just `STARTUP_DIR="$PWD"` be good enough?


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Is there a ETA for when this will make it into a release? It fixes an issues for me with a "complex" account.


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Thank's for this.


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2 在设置基准线的时候调用了保存基线信息的函数，把基线的信息输出到平面标定参数的文件夹中的BaseLineInfo.txt下。
 master


TeamCity Identity and Access Management / Identity - RoleManagementAPI [Build 779-IDAM-336-ApiProblems](https://teamcity.nice.org.uk/viewLog.html?buildId=64287&buildTypeId=IdentityandAccessManagement_RoleManagementAPI) outcome was **SUCCESS**
Summary: Tests passed: 59 Build time: 00:03:03


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supervised


zmienna title ma być pisana małą literą, od dużej zaczynamy tylko nazwy klas


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Based on recent observations on January 12, 2020, the sewer appears to have been unclogged and this matter is settled


Done.


TeamCity MAS / MAS [Build 1.1.0.533-MAS-185-Static-404](https://teamcity.nice.org.uk/viewLog.html?buildId=64273&buildTypeId=Mas_Mas) outcome was **SUCCESS**
Summary: Tests passed: 5 Build time: 00:01:59


ManageSurfaceHeatBal2 (energy-plus) - x86_64-Linux-Ubuntu-18.04-gcc-7.4: OK (2536 of 2639 tests passed, 485 test warnings)

Messages:\n
 * 402 tests had: DXF diffs.
 * 481 tests had: EIO diffs.
 * 557 tests had: ESO small diffs.
 * 587 tests had: SHD diffs.
 * 98 tests had: Table big diffs.
 * 453 tests had: MTR small diffs.
 * 291 tests had: Table small diffs.
 * 22 tests had: WRL diffs.
 * 2 tests had: MTD diffs.
 * 14 tests had: ESO big diffs.
 * 8 tests had: MTR big diffs.
 * 47 tests had: SLN diffs.
 * 43 tests had: ZSZ small diffs.
 * 17 tests had: ERR diffs.
 * 11 tests had: SSZ small diffs.
 * 6 tests had: SCI diffs.
 * 17 tests had: EDD diffs.
 * 22 tests had: RDD diffs.
 * 2 tests had: JSON big diffs.

Failures:\n

regression Test Summary
 * Passed: 587
 * Failed: 103

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-96.1%25-yellow.png)


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pasword


Would you be open to parsing CSS color strings to a rgba values via something like https://www.npmjs.com/package/color-rgba

(This is the library that plotly.js uses to do it)


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Failed to assign a domain to your deployment due to the following error:

~~~
Deployment not found.
~~~

([Learn more](https://zeit.co/cjayprime/multicurrencyviewer/69ec5n7oj) or [visit](https://multicurrencyviewer-69ec5n7oj.now.sh) the non-aliased deployment)


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LEEEEEROOOOOY <3


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the DMA width was increases from 32 to 64 bit - we also need to update this in the devicetree.


Sure hope so!


I was curious how this was implemented, but... 1473 additions & 1458 deletions? Any chance that could be two commits?


ブレークポイントによって文字色が変わる機能を削除


Hi. Thanks for your comment.
Actually, you will be surprised, but we didn't get to profiling yet! There are plans to perfom some majour reworks (i.e. to support multi-values WASM proposal), so we don't want to spend time on such optimization yet.


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自动构建 [auto-dragalia-fd01bc1f.zip](https://circleci.com/gh/NateScarlet/auto-dragalia/822/artifacts/0/home/circleci/project/artifacts/auto-dragalia-fd01bc1f.zip)


This also has to be a list
```
        flags:
          - unit
```


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совершенно верно!

Если хочешь слить изменения - делай pull request в pubro: master


Collaborator: Review for this commit was created. [Link to review](http://2e6be167.eu.ngrok.io/ui#review:id=861)


Collaborator cannot find remote user mapping for user that pushed commits, review created by system administrator


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@JuliaRegistrator register()


Error while trying to register: "Tag with name `0.8.1` already exists and points to a different commit"


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plugins/Makefile.inc


Registration pull request created: [JuliaRegistries/General/7962](https://github.com/JuliaRegistries/General/pull/7962)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.8.2 -m "<description of version>" 7c28c9f6f2ddbc752ea81b7000354429c1cf11ea
git push origin v0.8.2
```


Thanks!


To be clear, the `nixos-19.09` branch is identical to the channel. (We merged the `nixpkgs-channels` repo into `nixpkgs` a couple of months ago.) It gets updated from the `release-19.09` branch after all the tests have succeeded and all other builds have finished.

Graham talked about the release process last week: https://www.youtube.com/watch?v=iRUBTBtxNu8


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@JuliaRegistrator register


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* https://github-website.bycedric.now.sh
* https://github-website-git-master.bycedric.now.sh


Registration pull request updated: [JuliaRegistries/General/7968](https://github.com/JuliaRegistries/General/pull/7968)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.2.0 -m "<description of version>" 62a91290080394fd41aba9ab08f2328a8815506a
git push origin v0.2.0
```


I just modified the word, ran into an error trying to test with that particular string


Использовать одновременно две разные версии jquery -- плохая идея, так как может что-нибудь сломаться. Я указал неправильную библиотеку в задаче (она рассчитана на bootstrap 3, а мы используем bootstrap 4). Есть аналогичная библиотека для bootstrap 4: https://tempusdominus.github.io/bootstrap-4/
Нужно использовать её.


There is a typo:
`Flex:</b>\nAllows you to define the working time time for the selected day.`
`time` is only needed once in this sentence.
Besides that I like the description of the Flex event.


Done here: https://bugs.python.org/issue33351


does not work


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Писать JS код внутри тега script -- это плохой стиль. Нужно вынести в отдельный файл.


Нужно вынести в отдельный файл.


Add subtraction to calculator


No es necesario crear una clase constants, basta con escribir el keyword "const val" en un archivo Constants.kt


[![Visit Site](https://raw.githubusercontent.com/pantheon-systems/terminus-build-tools-plugin/master/assets/images/visit-site-36.png)](https://pr-85-gregory-industries.pantheonsite.io/)

Created multidev environment [pr-85](https://dashboard.pantheon.io/sites/6a63ef8e-11f2-468f-86b6-5973ebf0ffbd#pr-85) for gregory-industries.


Deployment failed with the following error:

~~~
We were not able to parse your `package.json` file, as it is invalid
~~~


Ten cuidado con los archivos que incluyes en tus commits. Te envío un enlace que proporciona Github para los gitignore en el escenario de Android: https://github.com/github/gitignore/blob/master/Android.gitignore


Does openmp also have the restriction that set_num_threads only masks threads, so it can't be higher than the number of threads launched initially?


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Thanks, It won't break anything but it's best practice to have a new line.


Deployment failed with the following error:

~~~
Could not find a secret by name "my_cloudinary_apikey"
~~~


increase to 70 years - wow will never die <3


¿Por qué 'untitled-font' ese es el nombre de la fuente?


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Ну это пипец, товарищи...


[R/helpers_contingency_tabs_expressions.R:86:1:](https://github.com/IndrajeetPatil/statsExpressions/blob/a1215e4d2f5ac15339c01690e7583b04f5113030/R/helpers_contingency_tabs_expressions.R#L86) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
expr_contingency_tab <- function(data,
^
```
[R/helpers_effsize_ci.R:20:3:](https://github.com/IndrajeetPatil/statsExpressions/blob/a1215e4d2f5ac15339c01690e7583b04f5113030/R/helpers_effsize_ci.R#L20) *warning:* **local variable ‘sample_size’ assigned but may not be used**
```r
  sample_size <- nrow(data_wide)
  ^~~~~~~~~~~
```
[R/helpers_effsize_ci.R:98:1:](https://github.com/IndrajeetPatil/statsExpressions/blob/a1215e4d2f5ac15339c01690e7583b04f5113030/R/helpers_effsize_ci.R#L98) *style:* **functions should have cyclomatic complexity of less than 15, this has 20.**
```r
effsize_t_parametric <- function(formula = NULL,
^
```


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Successfully deployed to following URLs:

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actually this commit is about to change logo color.


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I agree. I don't like the idea of using passwords at all for exactly the reasons you pointed out earlier -- they're visible to everyone. I will change this in the next submission.


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@michaelporter :rofl:


Now that the tg is correct (going to port 443 and not 6443), do we need to match 401?


could you grade all my new stuff at your earliest convenience?

On Wed, Jan 8, 2020 at 12:14 PM Jonathan Jr. Winkles <jwinks18@gmail.com>
wrote:

> sounds good il get on it
>
>
> On Wed, Jan 8, 2020 at 7:39 AM Matt Huntsberry <notifications@github.com>
> wrote:
>
>> Hey Winkles, I can't give this a grade quite yet because your app crashes
>> upon start up. You are in the right direction with the work but you are
>> missing a key part, the routes folder. Without that the app crashes. If
>> you review some of the previous homework or the perhaps the video I
>> uploaded to rocket chat in the beginning weeks of the course, this can help
>> you with setting up those routes. Also, as always I'll be at class a bit
>> early on Thursday and can point you in the correct direction if you need
>> any help.
>>
>> Please let me know if you want to meet up or if you have completed those
>> changes. Thanks!
>>
>> —
>> You are receiving this because you authored the thread.
>> Reply to this email directly, view it on GitHub
>> <https://github.com/jonwinkes99/311_checkpoint_1/commit/84a4ca8b13f8da3753a8611511a57550f0b7c302?email_source=notifications&email_token=AMM3GC2RTOAXJDFT2JVPEMTQ4XXSFA5CNFSM4KEKIDN2YY3PNVWWK3TUL52HS4DFVVBW63LNNF2EG33NNVSW45FKMNXW23LFNZ2F62LEZYBDAKRI#commitcomment-36710952>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/AMM3GC5SPKO5RNGUWRUWE23Q4XXSFANCNFSM4KEKIDNQ>
>> .
>>
>


The healthcheck should probably use the rancher api `/ping` endpoint


Report: https://www.ravenphpscripts.com/ftopicp-166468.html#166468


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[R/ABC_SMC.R:11:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L11) *style:* **Lines should not be more than 80 characters.**
```r
# @param    current                 vector       Current parameter combination for which we are determining the weight
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:12:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L12) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                   scalar       standard deviation of the perturbation
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:13:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L13) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function  function     Function to calculate the prior probability of a set of parameters
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:36:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L36) *style:* **Lines should not be more than 80 characters.**
```r
# @brief apply the ABC routine used in our Methods in Ecology and Evolution Paper
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:43:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L43) *style:* **Lines should not be more than 80 characters.**
```r
# @param    statistics                    vector      A vector containing functions that take a tree as an argument and return a single scalar value (the statistic).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:44:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L44) *style:* **Lines should not be more than 80 characters.**
```r
# @param    simulation_function           vector      A function that implements the diversification model and returns an object of class phylo
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:45:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L45) *style:* **Lines should not be more than 80 characters.**
```r
# @param    init_epsilon_values           vector      A vector containing the initial threshold values for the summary statistics from the vector statistics.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:46:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L46) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_generating_function     function    Function to generate parameters from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:47:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L47) *style:* **Lines should not be more than 80 characters.**
```r
# @param    prior_density_function        function    Function to calculate the prior probability of a set of parameters (should match prior_generating_function in shape)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:48:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L48) *style:* **Lines should not be more than 80 characters.**
```r
# @param    number_of_particles           scalar      Number of particles to be used per iteration of the ABC-SMC algorithm.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:49:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L49) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                         scalar      Standard deviation of the perturbance distribution (perturbance distribution is a gaussian with mean 0).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:50:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L50) *style:* **Lines should not be more than 80 characters.**
```r
# @param    stop_rate                     scalar      If the acceptance rate drops below \code{stopRate}, stop the ABC-SMC algorithm  and assume convergence.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:51:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L51) *style:* **Lines should not be more than 80 characters.**
```r
# @return                                 matrix      A matrix with n columns, where n is the number of parameters you are trying to estimate.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:75:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L75) *style:* **Lines should not be more than 80 characters.**
```r
#'   from the prior distribution of these parameters (e.g. a function returning lambda and mu in case of the birth-death model)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:126:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L126) *style:* **functions should have cyclomatic complexity of less than 15, this has 42.**
```r
abc_smc_nltt <- function(tree,
^
```
[R/ABC_SMC.R:276:13:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L276) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
        if ( (number_accepted / tried) < stop_rate) {
            ^
```
[R/ABC_SMC.R:301:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L301) *style:* **Lines should not be more than 80 characters.**
```r
# @brief Estimate the likelihood of a given tree, provided a likelihood function, using a Monte Carlo Markov Chain
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:308:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L308) *style:* **Lines should not be more than 80 characters.**
```r
# @param    likelihood_function   function    Function that calculates the likelihood of our diversification model, given the tree.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:309:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L309) *style:* **Lines should not be more than 80 characters.**
```r
#                                             function should be of the format function(parameters, phy).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:310:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L310) *style:* **Lines should not be more than 80 characters.**
```r
# @param    parameters            vector      Initial parameters to start the chain.
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:311:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L311) *style:* **Lines should not be more than 80 characters.**
```r
# @param    logtransforms         scalar      Whether to perform jumps on logtransformed parameters (TRUE) or not (FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:313:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L313) *style:* **Lines should not be more than 80 characters.**
```r
# @param    burnin                scalar      Length of the burnin, default is 30% of iterations
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:315:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L315) *style:* **Lines should not be more than 80 characters.**
```r
# @param    sigma                 scalar      Standard deviation of the jumping distribution, which is N(0, sigma).
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:316:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L316) *style:* **Lines should not be more than 80 characters.**
```r
# @return                         mcmc        An MCMC object, as used by the package "coda".
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/ABC_SMC.R:320:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/ABC_SMC.R#L320) *style:* **functions should have cyclomatic complexity of less than 15, this has 34.**
```r
mcmc_nltt <- function(phy, likelihood_function,
^
```
[R/get_average_nltt_matrix.R:14:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_average_nltt_matrix.R#L14) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
get_average_nltt_matrix <- function(
^
```
[R/get_n_lineages.R:17:12:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_n_lineages.R#L17) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
    return(1:length(phylogeny$tip.label))
           ^
```
[R/get_norm_brts.R:22:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/get_norm_brts.R#L22) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:27:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L27) *style:* **functions should have cyclomatic complexity of less than 15, this has 23.**
```r
nltt_diff_exact_extinct <- function(
^
```
[R/nltt_diff_exact_extinct.R:50:27:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L50) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "since"){
                          ^~
```
[R/nltt_diff_exact_extinct.R:57:25:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L57) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "ago"){
                        ^~
```
[R/nltt_diff_exact_extinct.R:82:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L82) *style:* **Lines should not be more than 80 characters.**
```r
    species_number_n <- species_number / max(species_number)  #normalize lineages
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:87:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L87) *style:* **Lines should not be more than 80 characters.**
```r
    event_times2_n <- 1 - event_times2 / min(event_times2) #normalize branching times
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:88:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L88) *style:* **Lines should not be more than 80 characters.**
```r
    species_number2_n <- species_number2 / max(species_number2)  #normalize lineages
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:136:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L136) *style:* **Commented code should be removed.**
```r
  # testit::assert(event_times[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:137:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L137) *style:* **Commented code should be removed.**
```r
  # testit::assert(species_number[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:138:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L138) *style:* **Commented code should be removed.**
```r
  # testit::assert(event_times2[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:139:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L139) *style:* **Commented code should be removed.**
```r
  # testit::assert(species_number[1] >= 0.0)
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:141:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L141) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(event_times >= 0.0 & event_times <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:142:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L142) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(species_number >= 0.0 & species_number <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:143:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L143) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(event_times2 >= 0.0 & event_times2 <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:144:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L144) *style:* **Commented code should be removed.**
```r
  # testit::assert(all(species_number >= 0.0 & species_number <= 1.0))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltt_diff_exact_extinct.R:183:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L183) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:184:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L184) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nltt_diff_exact_extinct.R:185:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltt_diff_exact_extinct.R#L185) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[R/nLTTDiff.R:59:27:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L59) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "since"){
                          ^~
```
[R/nLTTDiff.R:66:25:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L66) *style:* **There should be a space between right parenthesis and an opening curly brace.**
```r
  if (time_unit == "ago"){
                        ^~
```
[R/nLTTDiff.R:186:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L186) *style:* **Lines should not be more than 80 characters.**
```r
#' Calculates the exact difference between the lineage through time curves of tree1 & tree2 (normalized in time and for the number of lineages)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:274:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L274) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:275:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L275) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:283:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L283) *style:* **Lines should not be more than 80 characters.**
```r
#' @usage nLTTstat(tree1, tree2, distance_method = "abs", ignore_stem = TRUE, log_transform = FALSE)
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:344:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L344) *style:* **Lines should not be more than 80 characters.**
```r
# @param    distance_method        string     Method to calculate the difference, either absolute, or squared
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:345:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L345) *style:* **Lines should not be more than 80 characters.**
```r
# @param    ignore_stem            logical    Should the phylogeny its stem be ignored?
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nLTTDiff.R:346:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nLTTDiff.R#L346) *style:* **Lines should not be more than 80 characters.**
```r
# @return                          scalar     normalized Lineage-Through-Time difference between tree1 & tree2
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[R/nltts_plot.R:19:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/nltts_plot.R#L19) *style:* **functions should have cyclomatic complexity of less than 15, this has 17.**
```r
nltts_plot <- function(
^
```
[R/plot_nLTT.R:36:23:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L36) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
nltt_plot <- function( phy, xlab = "Normalized Time",
                      ^
```
[R/plot_nLTT.R:51:28:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                           ^
```
[R/plot_nLTT.R:51:33:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L51) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs( min( xy[, 1])) #make sure time runs from 0..T
                                ^
```
[R/plot_nLTT.R:52:28:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L52) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] / max( xy[, 1])      #normalize time
                           ^
```
[R/plot_nLTT.R:94:32:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/plot_nLTT.R#L94) *style:* **Do not place spaces around code in parentheses or square brackets.**
```r
  xy[, 1] <- xy[, 1] + abs(min( xy[, 1])) #make sure time runs from 0..T
                               ^
```
[R/stretch_nltt_matrix.R:22:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/R/stretch_nltt_matrix.R#L22) *style:* **functions should have cyclomatic complexity of less than 15, this has 16.**
```r
stretch_nltt_matrix <- function(
^
```
[tests/testthat/test-abc_smc_nltt.R:30:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L30) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-abc_smc_nltt.R:35:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L35) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-abc_smc_nltt.R:49:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L49) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- stats::optimize(f = tofit, interval = c(0, 1))
  ^~
```
[tests/testthat/test-abc_smc_nltt.R:55:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-abc_smc_nltt.R#L55) *style:* **Variable and function name style should be snake_case.**
```r
  A <- abc_smc_nltt(
  ^
```
[tests/testthat/test-get_average_nltt.R:10:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-get_average_nltt.R#L10) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-get_average_nltt.R:41:5:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-get_average_nltt.R#L41) *style:* **Commented code should be removed.**
```r
  # suppressWarnings(RNGversion("3.5.0"))
    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-mcmc_nltt.R:14:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L14) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-mcmc_nltt.R:31:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L31) *style:* **Variable and function name style should be snake_case.**
```r
  ML <- optim(par = c(1, 0.001), fn = tofit)
  ^~
```
[tests/testthat/test-mcmc_nltt.R:58:3:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-mcmc_nltt.R#L58) *style:* **Variable and function name style should be snake_case.**
```r
  LL_BD <- function(params, phy) {
  ^~~~~
```
[tests/testthat/test-nltt_diff_exact_brts.R:40:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_brts.R#L40) *style:* **Lines should not be more than 80 characters.**
```r
    regexp = "branching times must be negative, for example -3 time units since the present"
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
```
[tests/testthat/test-nltt_diff_exact_brts.R:54:1:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_brts.R#L54) *style:* **Trailing blank lines are superfluous.**
```r

^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:29:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L29) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages1 <- 1:length(event_times)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:30:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L30) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages2 <- 1:length(event_times2)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:77:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L77) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages1 <- 1:length(event_times)
               ^
```
[tests/testthat/test-nltt_diff_exact_extinct.R:78:16:](https://github.com/Neves-P/nLTT/blob/4455dbd8f7adb503cf8f037304043259d7cb65f8/tests/testthat/test-nltt_diff_exact_extinct.R#L78) *warning:* **Avoid 1:length(...) expressions, use seq_len.**
```r
  lineages2 <- 1:length(event_times2)
               ^
```


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Done. :)


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@JuliaRegistrator register


ça va?


Registration pull request created: [JuliaRegistries/General/7844](https://github.com/JuliaRegistries/General/pull/7844)

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if [Julia TagBot](https://github.com/apps/julia-tagbot) is installed, or can be done manually through the github interface, or via:
```
git tag -a v0.2.0 -m "<description of version>" be016173bdb9d122688d63acd6506c3178e56dde
git push origin v0.2.0
```


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Deployment failed with the following error:

~~~
Your `package.json` file is missing a `build` property inside the `scripts` property.
~~~


@metalmatze Not sure if absence of documentation is preferable over outdated documentation....


"negation" is a parameter which is kind a hard to interpret. Perhaps something like "use_negated_templates" would be easier to understand?


WAŻNE: nie powinniśmy zwracać List<Floor> ?


There is no need in loop as we save only one image source. `arr.get(0).getAsJsonObject...`


I mentioned in the first comment that because of using generic type if the number of distinct symbols in the union of target and query was large, making the square matrix in EqualityDefintion would be expensive. ( consider integer ).
I didn't remove this class but I didn't use it.


FLOOR!


`getPictureFromMars` and `getPictureOfTheDay` have duplicate code


Nice!


change


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Hello @andrewheberle
Why not using module "github.com/go-yaml/yaml"?

From my understanding, since Go 1.11 and the huge improvements of `go get`, dependencies tools and versions-emulation URL like `gopkg.in` are no longer required.


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@FredoVelcro Did you found a solution? I have the same problem at the moment.


# Specs execution successful
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I would still leave orders here.. We are generally explaining atomic orders. Actions order is already a specific order type.


Setting visibility to hidden would do the job; that's a great solution. I assume that setting `m_visibility` to hidden would prevent it from being rendered to MIDI?

I see that `<lem>` and `<rdg>` have it already (as `EditorialElement`), so only `<section>` and `<ending>` would require this attribute. Would adding this attribute to `<SystemElement>` suffice?


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You are pushing commits at a very fast pace (across the whole organization).
Due to that, we cannot deploy the commit e570683e585f1abab8ef4c7f1ac5f9738eec8a58.

You can try again later or [upgrade](https://zeit.co/teams/roleypoly/settings/plan) your plan.


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It was the bottom left-over, top one I can't reproduce on iPhone.


Геттеры записал в одну строку, а ацессоры почему отдельно?


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В геттеры можно еще добавить `route`


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That would be awesome, thanks! I won't be needing demos for a long while but once I do get to that point I might take you up on your offer :) I'll probably record some demos in an emulator as well just to sanity check (it *should* in theory play the same?) but having demos off the real hardware would be even better - just on the off chance that the emulator gets it wrong.


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А вот `:next_station, :last_station` убрать. Потому что у тебя есть методы, возвращающие эти станции, где логика немного сложнее, чем просто возвращение объекта.


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[Your test job](https://github.com/JuliaLang/julia/commit/a2fe09e6a7e34861fb30f9fb9d483f0dc73a6f4e#commitcomment-36778756) has completed - possible new issues were detected. A full report can be found [here](https://github.com/JuliaCI/NanosoldierReports/blob/b22e2536e11d6117312ac70ae3cd4123d42ddfc6/pkgeval/by_date/2020-01/13/report.md). cc @maleadt


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Тут запутался, или чего-то не понял?
Во-первых, можно задавать текущую станцию супер лаконично: `self.current_station = next_station`


api en ya no sirve


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Play with the code and write some comments.


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Niiice


@snicolet
you seem to be online, may I ask you to do it after you finish with sf11 release? :D


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what is meant by this?


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proooo AF gawd


Fibonacci Sayıları:
Her sayının kendisinden önce gelen iki sayının toplamı şeklinde yazılıp devam ettiği sayı dizisine
Fibonacci Sayı Dizisi denir.
1,1,2,3,5,8,13,21,34,55, 89, 144, 233, 377, 610, 987, 1597, 2584, 4181, 6765, 10946, …


The problem is doing that would require adding code to places that are not actually broken which needs far more testing and I typically wouldn't do in a patch release. Particularly given the case that this is a 1 minute manual edit to fix in the data.


7545_QtIFW_Linux (jmarrec) - x86_64-Linux-Ubuntu-18.04-cppcheck: OK (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png)


Leaves time for npc to thank you during the interaction.


7545_QtIFW_Linux (jmarrec) - x86_64-Linux-Ubuntu-18.04-custom_check: OK (11 of 11 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-warnings-yellow.png)


https://buildkite.com/bazel/bazel-at-head-plus-downstream/builds/1352#_
Some projects still have `--incompatible_remap_main_repo` in their build config, can you help clean them up?


caf likes to derp a lot


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i removed velocity and added fallspeed


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Stiu cam am zis sa folosesti mai mult <div> dar e o idee mai buna sa il facem cu <ul>, <li>


Needs escaped " at the end.


oh I see. but you need a different fallspeed for highway and not highway


For some reason this statement returns an error.

/opt/retropie/emulators/daphne/daphne.sh: line 10: syntax error in conditional expression
/opt/retropie/emulators/daphne/daphne.sh: line 10: syntax error near `-a'
/opt/retropie/emulators/daphne/daphne.sh: line 10: `if [[ -n "$2" -a -n "$3" ]]; then'


well it is customizable isnt it


this could be `bufferWriter.writeVarInt(this.transactions.length)`


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TeamCity Glyssen / Glyssen pull requests (64-bit) [Build *.*.823.1056da60d652ce07331f179ba5df7c2cbbfc21af](https://build.palaso.org/viewLog.html?buildId=177496&buildTypeId=Glyssen_GlyssenPullRequests64bitWithSilNuGetPackages) outcome was **FAILURE**
Summary: Tests failed: 2, passed: 2402, ignored: 18 Build time: 00:12:27
### Failed tests
```
ControlDataIntegrityTests.dll: ControlDataIntegrityTests.CharacterVerseDataTests.DataIntegrity_RareMustBeAccompaniedByNeedsReview: Test(s) failed.   Character-verse file contains a Rare quote for Jeremiah in JER 23:11 along with 1 non-rare entry, so the corresponding Needs Review entry for that verse should be of type Rare to prevent an unnecessary ambiguity.
  Expected: Rare
  But was:  Potential

   at NUnit.Framework.Assert.That(Object actual, IResolveConstraint expression, String message, Object[] args)
   at ControlDataIntegrityTests.CharacterVerseDataTests.DataIntegrity_RareMustBeAccompaniedByNeedsReview() in C:\BuildAgent\work\6f6447acf44d9c11\ControlDataIntegrityTests\CharacterVerseDataTests.cs:line 378

ControlDataIntegrityTests.dll: ControlDataIntegrityTests.NarratorOverridesTests.DataIntegrity_NoOverridesCoverVersesWithImplicitCharacter: Test(s) failed.   Character-verse file contains an Implicit quote for Jeremiah in verse JER 14:2 that is also covered by narrator override System.Linq.Enumerable+WhereListIterator`1[GlyssenEngine.Character.NarratorOverrides+NarratorOverrideDetail].
  Expected: True
  But was:  False

   at NUnit.Framework.Assert.That(Object actual, IResolveConstraint expression, String message, Object[] args)
   at ControlDataIntegrityTests.NarratorOverridesTests.DataIntegrity_NoOverridesCoverVersesWithImplicitCharacter() in C:\BuildAgent\work\6f6447acf44d9c11\ControlDataIntegrityTests\NarratorOverridesTests.cs:line 170

```


Do you think we should add @expectedDeprecated class-wide? Is that possible?


Do you mean
CC=clang make
fails in line 310?
this has nothing to do with this change and has been the case for a long time (actually forever, so I thought its how it is)


doesn't solve the issue


Copy of this build can be found at
https://www.mewbuilds.com/build/bfcba1552867f4c22f2f1fe22a485136d6d3845b/index.html
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                       Virus Total analysis
                       https://www.virustotal.com/file/03645743545ad2393ab3d64fa5d4f7c4f3da0abf15f80941f8f3dea784b6239a/analysis/1579131738/


Hi! This is the friendly automated conda-forge-webservice.

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Deployment failed with the following error:

~~~
You defined 1 build that did not match any source files (please ensure they are NOT defined in .nowignore):
~~~


Deployment failed with the following error:

~~~
The property `request` is not allowed in now.json when using Now 2.0 – please remove it.
~~~


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Deployment failed with the following error:

~~~
Couldn't parse JSON file /tmp/GcMnQOVMFtRusKR3XmdlKJ49/repo/now.json.
~~~


EIR_AWHP (mitchute) - Win64-Windows-10-VisualStudio-16: Tests Failed (0 of 0 tests passed, 0 test warnings)

![Build Badge](http://img.shields.io/badge/build%20status-passing-green.png) ![Test Badge](http://img.shields.io/badge/tests%20passed-NA-red.png)


Hey my friend, ginkgo don't have NFC!


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> Am I understanding the reason to remove overflow protection correctly @HeikoFisch @Corsaire ?

Yes, essentially that's correct.
The variables don't match (`userBalance` vs. `amount`), and  `-=`/`+=` would have been simpler and better readable.
Also, it's worth considering changing the `addToBalance` and `subtractFromBalance` functions; that would change the internal accounting globally. (Basically what I described in yesterday's chat as version 2 -- but also for `submitProposal` and `sponsorProposal`.)


Failed to assign a domain to your deployment due to the following error:

~~~
The chosen alias "carbondesignsystem.now.sh" is already in use.
~~~

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Is there a reason why this was removed? This results in no tests run anymore on https://ci.jenkins.io/.


I don't think we should implement conversion traits for `Vector` and `Vec2`.

My thinking is that the two types are in completely different co-ordinate spaces, `Vec2` is used to identify a location on the screen (*Canvas Space*) while `Vector` is used to identify a location on the drawing (*Drawing Space*). Conversions should be done using the functions in [`arcs/src/window/utils.rs`](https://github.com/Michael-F-Bryan/arcs/blob/master/arcs/src/window/utils.rs).

I'll see if I can make this more explicit in the `Vector` or `arcs::window` docs.


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